EY744421
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: GLH2_CAEEL (ATP-dependent RNA helicase glh-2 OS=Caenorhabditis elegans GN=glh-2 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.206e-16 Identity = 43/116 (37.07%), Postives = 67/116 (57.76%), Query Frame = 1 Query: 241 GINFDAYEDIPVETSGENVPPAVNT---FAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPSWLLFLPPQE 579 G+ F+ + D V+ + + P V T F+E +LGE + N+ Y K TP+Q++ +P+ G D+MACAQTGSGKTAAF PI++ ++ E + G YP ++ P +E Sbjct: 526 GLMFNKFFDAEVKITSDKKPVGVKTCKTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDL-NTAGEGGCYPRCIILTPTRE 640 HSP 2 Score: 23.0978 bits (48), Expect = 3.206e-16 Identity = 9/14 (64.29%), Postives = 12/14 (85.71%), Query Frame = 3 Query: 558 LILAPTRELSSQIH 599 +IL PTREL+ QI+ Sbjct: 633 IILTPTRELTDQIY 646
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: RH24_ORYSJ (DEAD-box ATP-dependent RNA helicase 24 OS=Oryza sativa subsp. japonica GN=Os03g0308500 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.406e-15 Identity = 41/118 (34.75%), Postives = 62/118 (52.54%), Query Frame = 1 Query: 178 EVNPFGDDVGAEQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRG 531 E PF D E+P + D + + + SG +VP + +FA+ L I + Y KPT +Q A+PI + GRD++ A+TGSGKTAAF P+I IM + +++ G Sbjct: 175 EYEPFNKDFYEEKPSVSGMSEQEVADYMKSLAIRVSGFDVPRPIKSFADCGFPVQLMNAIAKQGYEKPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEG 292 HSP 2 Score: 29.6462 bits (65), Expect = 3.406e-15 Identity = 22/70 (31.43%), Postives = 35/70 (50.00%), Query Frame = 3 Query: 552 LALILAPTRELSSQIHV*SPRNFPNPTGVRGGVAFRRNHHSTHHLRKLLKKGVEYSFGQPPRKMGLIRVE 761 + ++ APTREL+ QI++ + F P +R VA S K LK G E P R + L++++ Sbjct: 294 IGVVCAPTRELAHQIYL-EAKKFAKPYNLR--VAAVYGGVSKFDQFKELKAGCEIVIATPGRLIDLLKMK 360
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: GLH1_CAEEL (ATP-dependent RNA helicase glh-1 OS=Caenorhabditis elegans GN=glh-1 PE=1 SV=3) HSP 1 Score: 78.1814 bits (191), Expect = 1.261e-14 Identity = 49/132 (37.12%), Postives = 75/132 (56.82%), Query Frame = 1 Query: 196 DDVGAEQPVAEEENTGINFDAYEDIPVE-TSGEN---VPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPSWLLFLPPQE 579 +DV Q ++E G+ F+ + D V+ TS E + P TFAE +L E + N+ Y K TP+Q++A+P+ G D+MACAQTGSGKTAAF PI++ ++ + + G YP ++ P +E Sbjct: 304 EDVFNMQKISE----GLMFNKFFDAEVKLTSSEKTVGIKPC-KTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNL-NTAGEGGCYPRCIILTPTRE 429 HSP 2 Score: 23.0978 bits (48), Expect = 1.261e-14 Identity = 9/14 (64.29%), Postives = 12/14 (85.71%), Query Frame = 3 Query: 558 LILAPTRELSSQIH 599 +IL PTREL+ QI+ Sbjct: 422 IILTPTRELADQIY 435
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: GLH3_CAEEL (ATP-dependent RNA helicase glh-3 OS=Caenorhabditis elegans GN=glh-3 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.263e-14 Identity = 39/118 (33.05%), Postives = 67/118 (56.78%), Query Frame = 1 Query: 235 NTGINFDAYEDIPVETSGENVPPAVN---TFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPSWLLFLPPQE 579 N G FD + D V+ P + +F++ D+ +++ N+ R Y + TP+Q++ +P+ G+D++ACAQTGSGKTAAF PI+S ++ E+ + YP ++ P +E Sbjct: 270 NAGDFFDKFFDASVQLVSRGQPVTIQPCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMSRLILEKDLNY-GAEGGCYPRCIILTPTRE 386 HSP 2 Score: 23.0978 bits (48), Expect = 1.263e-14 Identity = 9/14 (64.29%), Postives = 12/14 (85.71%), Query Frame = 3 Query: 558 LILAPTRELSSQIH 599 +IL PTREL+ QI+ Sbjct: 379 IILTPTRELADQIY 392
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: RH24_ARATH (DEAD-box ATP-dependent RNA helicase 24 OS=Arabidopsis thaliana GN=RH24 PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.639e-14 Identity = 40/114 (35.09%), Postives = 63/114 (55.26%), Query Frame = 1 Query: 190 FGDDVGAEQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRG 531 F +++ + + E+E T D + + + SG +V V TF + + I++ Y KPT +Q A+PI + GRD++ A+TGSGKTAAF P+I IM + +QR G Sbjct: 192 FYEELESISGMTEQETT----DYRQRLGIRVSGFDVHRPVKTFEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVHIMDQPELQRDEG 301 HSP 2 Score: 30.8018 bits (68), Expect = 1.639e-14 Identity = 21/70 (30.00%), Postives = 34/70 (48.57%), Query Frame = 3 Query: 552 LALILAPTRELSSQIHV*SPRNFPNPTGVRGGVAFRRNHHSTHHLRKLLKKGVEYSFGQPPRKMGLIRVE 761 + +I APTREL+ QI + + F G+R + S H K LK G E P R + +++++ Sbjct: 303 IGVICAPTRELAHQIFL-EAKKFSKAYGLRVSAVY--GGMSKHEQFKELKAGCEIVVATPGRLIDMLKMK 369
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: PRP28_ASPNC (Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=prp28 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.762e-14 Identity = 39/106 (36.79%), Postives = 58/106 (54.72%), Query Frame = 1 Query: 262 EDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPSWLLFLPPQE 579 ED + T G +VP + ++ E +L + L I R Y +PTP+QR AIPI++ RDL+ A TGSGKTAAF P++ I + + P ++ P +E Sbjct: 356 EDFNISTKGGSVPNPMRSWDESNLPKRLMELINRVGYKEPTPIQRAAIPIAMQNRDLIGVAVTGSGKTAAFLLPLLCYIAELPRIDEFEWRKADGPYAIVLAPTRE 461 HSP 2 Score: 31.187 bits (69), Expect = 2.762e-14 Identity = 22/66 (33.33%), Postives = 29/66 (43.94%), Query Frame = 3 Query: 555 ALILAPTRELSSQIHV*SPRNFPNPTGVRGGVAFRRNHHSTHHLRKLLKKGVEYSFGQPPRKMGLI 752 A++LAPTREL+ QI + + F P G V HS L+ G E P R + I Sbjct: 453 AIVLAPTRELAQQIEI-EAKKFTGPLGF--NVVSIVGGHSLEEQAYSLRDGAEIIIATPGRLVDCI 515
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: PRP28_EMENI (Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Emericella nidulans GN=prp28 PE=3 SV=2) HSP 1 Score: 66.2402 bits (160), Expect = 7.871e-14 Identity = 38/106 (35.85%), Postives = 57/106 (53.77%), Query Frame = 1 Query: 262 EDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPSWLLFLPPQE 579 ED + T G +VP + ++ E L + L + R Y +PTP+QR AIPI++ RDL+ A TGSGKTAAF P++ I + + P ++ P +E Sbjct: 330 EDFNIATKGGSVPNPMRSWDESGLPKRLLELVDRVGYKEPTPIQRAAIPIAMQSRDLIGVAVTGSGKTAAFLLPLLCYIAELPRIDEFEWRKNDGPYAIVLAPTRE 435 HSP 2 Score: 32.3426 bits (72), Expect = 7.871e-14 Identity = 23/71 (32.39%), Postives = 33/71 (46.48%), Query Frame = 3 Query: 555 ALILAPTRELSSQIHV*SPRNFPNPTG-----VRGGVAFRRNHHSTHHLRKLLKKGVEYSFGQPPRKMGLI 752 A++LAPTREL+ QI + + F P G + GG +F +S L+ G E P R + I Sbjct: 427 AIVLAPTRELAQQIEI-EAKKFTEPLGFNVVSIVGGHSFEEQAYS-------LRNGAEIIIATPGRLVDCI 489
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: PRP28_NEOFI (Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=prp28 PE=3 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 1.327e-13 Identity = 32/76 (42.11%), Postives = 48/76 (63.16%), Query Frame = 1 Query: 262 EDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPII 489 ED + T G +VP + ++ E L + L + + Y +PTP+QR AIPI++ RDL+ A TGSGKTA+F P++ Sbjct: 348 EDFNISTKGGSVPNPMRSWEESGLPKRLLELVDQVGYKEPTPIQRAAIPIALQSRDLIGVAVTGSGKTASFLLPLL 423 HSP 2 Score: 33.4982 bits (75), Expect = 1.327e-13 Identity = 24/71 (33.80%), Postives = 33/71 (46.48%), Query Frame = 3 Query: 555 ALILAPTRELSSQIHV*SPRNFPNPTG-----VRGGVAFRRNHHSTHHLRKLLKKGVEYSFGQPPRKMGLI 752 A++LAPTREL+ QI + R F P G + GG +F +S L+ G E P R + I Sbjct: 445 AIVLAPTRELAQQIEI-EARKFTQPLGFNVVSIVGGHSFEEQAYS-------LRNGAEIIIATPGRLVDCI 507
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: PRP28_ASPFU (Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Aspergillus fumigatus GN=prp28 PE=3 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 1.327e-13 Identity = 32/76 (42.11%), Postives = 48/76 (63.16%), Query Frame = 1 Query: 262 EDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPII 489 ED + T G +VP + ++ E L + L + + Y +PTP+QR AIPI++ RDL+ A TGSGKTA+F P++ Sbjct: 348 EDFNISTKGGSVPNPMRSWEESGLPKRLLELVDQVGYKEPTPIQRAAIPIALQSRDLIGVAVTGSGKTASFLLPLL 423 HSP 2 Score: 33.4982 bits (75), Expect = 1.327e-13 Identity = 24/71 (33.80%), Postives = 33/71 (46.48%), Query Frame = 3 Query: 555 ALILAPTRELSSQIHV*SPRNFPNPTG-----VRGGVAFRRNHHSTHHLRKLLKKGVEYSFGQPPRKMGLI 752 A++LAPTREL+ QI + R F P G + GG +F +S L+ G E P R + I Sbjct: 445 AIVLAPTRELAQQIEI-EARKFTQPLGFNVVSIVGGHSFEEQAYS-------LRNGAEIIIATPGRLVDCI 507
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: DDX42_XENLA (ATP-dependent RNA helicase DDX42 OS=Xenopus laevis GN=ddx42 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.717e-13 Identity = 40/120 (33.33%), Postives = 62/120 (51.67%), Query Frame = 1 Query: 172 EREVNPFGDDVGAEQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRG 531 E E PF + E + + + + SG P ++FA E L IR+ +Y +PTP+Q IP+++ GRD++ A+TGSGKTAAF +PI+ IM ++ +Q G Sbjct: 204 EIEYPPFEKNFYEEHEAITSQTPQQITELRHKLNLRVSGAAPPRLCSSFAHFGFDEQLLHQIRKSEYTQPTPIQCQGIPVALSGRDMIGIAKTGSGKTAAFIWPILVHIMDQKELQPADG 323 HSP 2 Score: 25.409 bits (54), Expect = 1.717e-13 Identity = 10/16 (62.50%), Postives = 13/16 (81.25%), Query Frame = 3 Query: 552 LALILAPTRELSSQIH 599 +A+I+ PTREL QIH Sbjct: 325 IAVIVCPTRELCQQIH 340 The following BLAST results are available for this feature:
BLAST of EY744421 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 133
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY744421 ID=EY744421; Name=EY744421; organism=Citrus sinensis; type=EST; length=996bpback to top |