EY744421
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: RRP3_NEUCR (ATP-dependent rRNA helicase rrp-3 OS=Neurospora crassa GN=rrp-3 PE=3 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 3.089e-12 Identity = 35/100 (35.00%), Postives = 53/100 (53.00%), Query Frame = 1 Query: 211 EQPVAEEENTGINFDAYED---IPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIM 501 + P EE+T ED + V E V TF ++ + +AL R Y PTP+Q +IP+++ RD++ A+TGSGKTAAF PI+ ++ Sbjct: 54 DAPEPAEESTPATNSTEEDSVTLDVAPEQEEVETVKKTFKDLGIVDALCEACERLGYKNPTPIQEQSIPLALQNRDIIGIAETGSGKTAAFALPILQALL 153 HSP 2 Score: 27.7202 bits (60), Expect = 3.089e-12 Identity = 12/16 (75.00%), Postives = 15/16 (93.75%), Query Frame = 3 Query: 549 LLALILAPTRELSSQI 596 L AL+LAPTREL++QI Sbjct: 159 LFALVLAPTRELAAQI 174
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: PRP28_CHAGB (Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Chaetomium globosum GN=PRP28 PE=3 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 5.163e-12 Identity = 32/76 (42.11%), Postives = 46/76 (60.53%), Query Frame = 1 Query: 262 EDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPII 489 E+ + T G +P + ++AE +L L + Y +PTP+QR AIPI+ RDL+ A TGSGKTAAF P++ Sbjct: 253 ENFGIATKGGAIPNPMRSWAESNLPRRLLEIVENVGYDEPTPIQRAAIPIAQQARDLIGVAVTGSGKTAAFLLPLL 328 HSP 2 Score: 30.4166 bits (67), Expect = 5.163e-12 Identity = 24/61 (39.34%), Postives = 25/61 (40.98%), Query Frame = 3 Query: 555 ALILAPTRELSSQIHV*SPRNFPNPTGVRGGVAFRRNHHSTHHLRKLLKKGVEYSFGQPPR 737 ALILAPTREL QI R F P G V HS L+ G E P R Sbjct: 348 ALILAPTRELVQQIET-EARKFAGPLGFT--VVSIVGGHSLEEQAFALRNGAEIIVATPGR 405
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: DDX59_HUMAN (Probable ATP-dependent RNA helicase DDX59 OS=Homo sapiens GN=DDX59 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.181e-12 Identity = 39/106 (36.79%), Postives = 57/106 (53.77%), Query Frame = 1 Query: 262 EDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPSWLLFLPPQE 579 + + + G+ V + F L E LN N+++ Y PTP+Q IP+ + GRD++A A TGSGKTAAF P+I + E S+T PS L+ P +E Sbjct: 187 QQLGILVQGQEVTRPIIDFEHCSLPEVLNHNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVIMRALFE--------SKT--PSALILTPTRE 282 HSP 2 Score: 23.8682 bits (50), Expect = 5.181e-12 Identity = 11/14 (78.57%), Postives = 12/14 (85.71%), Query Frame = 3 Query: 555 ALILAPTRELSSQI 596 ALIL PTREL+ QI Sbjct: 274 ALILTPTRELAIQI 287
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: PRP28_SCLS1 (Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=prp28 PE=3 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 6.677e-12 Identity = 32/76 (42.11%), Postives = 47/76 (61.84%), Query Frame = 1 Query: 262 EDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPII 489 ED + T G +P + +++E L + L I + Y +P+ VQR AIPI++ RDL+ A TGSGKTAAF P++ Sbjct: 363 EDFNISTKGGAIPNPMRSWSESKLPKRLLDVINQVGYDEPSAVQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLL 438 HSP 2 Score: 31.187 bits (69), Expect = 6.677e-12 Identity = 25/71 (35.21%), Postives = 31/71 (43.66%), Query Frame = 3 Query: 555 ALILAPTRELSSQIHV*SPRNFPNPTG-----VRGGVAFRRNHHSTHHLRKLLKKGVEYSFGQPPRKMGLI 752 A+ILAPTREL+ QI V + F P G + GG HS L+ G E P R + I Sbjct: 458 AIILAPTRELAQQIEV-EAKKFATPLGFTCVSIVGG-------HSLEEQSYNLRNGAEIIIATPGRLVDCI 520
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: DBP2_CRYNE (ATP-dependent RNA helicase DBP2-A OS=Cryptococcus neoformans GN=DBP2 PE=3 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 6.753e-12 Identity = 29/70 (41.43%), Postives = 44/70 (62.86%), Query Frame = 1 Query: 274 VETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFP 483 ++ G+NVP + TF E + + IRR + P+ +Q A P+++ GRDL+A A+TGSGKT +FC P Sbjct: 98 MKIQGKNVPRPITTFEEAGFPDYIMSEIRRMGFTAPSSIQCQAWPMALSGRDLVAIAETGSGKTISFCLP 167 HSP 2 Score: 27.7202 bits (60), Expect = 6.753e-12 Identity = 23/72 (31.94%), Postives = 33/72 (45.83%), Query Frame = 3 Query: 552 LALILAPTRELSSQIHV*SPRNFPNPTGVRGGVAFRRNHHSTHHLRKLLKKGVEYSFGQPPRKMGLIRVEKT 767 + LILAPTREL+ QI F + +R A +R L++GVE P R + ++ KT Sbjct: 185 IVLILAPTRELAVQIQT-EATKFGQSSRIR-NTAIYGGAPKGPQIRD-LQRGVEICVATPGRLIDMLETGKT 253
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: RH28_ORYSJ (DEAD-box ATP-dependent RNA helicase 28 OS=Oryza sativa subsp. japonica GN=Os12g0481100 PE=2 SV=2) HSP 1 Score: 65.0846 bits (157), Expect = 8.672e-12 Identity = 39/110 (35.45%), Postives = 53/110 (48.18%), Query Frame = 1 Query: 172 EREVNPFGDDVGAEQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIM 501 E E GD+ AE EEE T + S E N+F E++L L Y KPTP+Q IP+++ GRD+ A TGSGKTAAF P++ ++ Sbjct: 152 EEEEKEEGDEEAAE----EEEETDKKSGVVDPSKFFASSEGASFHANSFLELNLSRPLLRACEALGYQKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPVLERLL 257 HSP 2 Score: 26.5646 bits (57), Expect = 8.672e-12 Identity = 10/18 (55.56%), Postives = 15/18 (83.33%), Query Frame = 3 Query: 546 SLLALILAPTRELSSQIH 599 ++ LIL PTREL++Q+H Sbjct: 265 AIRVLILTPTRELAAQVH 282
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: PRP28_BOTFB (Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Botryotinia fuckeliana (strain B05.10) GN=prp28 PE=3 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 8.678e-12 Identity = 32/76 (42.11%), Postives = 46/76 (60.53%), Query Frame = 1 Query: 262 EDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPII 489 ED + T G +P + ++E L + L I + Y +P+ VQR AIPI++ RDL+ A TGSGKTAAF P++ Sbjct: 364 EDFNISTKGGAIPNPMRNWSESKLPKRLLDVIHQVGYDEPSAVQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLL 439 HSP 2 Score: 31.187 bits (69), Expect = 8.678e-12 Identity = 25/71 (35.21%), Postives = 31/71 (43.66%), Query Frame = 3 Query: 555 ALILAPTRELSSQIHV*SPRNFPNPTG-----VRGGVAFRRNHHSTHHLRKLLKKGVEYSFGQPPRKMGLI 752 A+ILAPTREL+ QI V + F P G + GG HS L+ G E P R + I Sbjct: 459 AIILAPTRELAQQIEV-EAKKFATPLGFTCVSIVGG-------HSLEEQSYNLRNGAEIIIATPGRLVDCI 521
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: PRP28_GIBZE (Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Gibberella zeae GN=PRP28 PE=3 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 8.697e-12 Identity = 31/76 (40.79%), Postives = 46/76 (60.53%), Query Frame = 1 Query: 262 EDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPII 489 ED + T G +P + ++ E +L + L + Y P+P+QR AIPI++ RDL+ A TGSGKTAAF P++ Sbjct: 272 EDFGIATKGGMIPNPMRSWQESNLPQRLLNIVDDVGYKDPSPIQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLL 347 HSP 2 Score: 30.4166 bits (67), Expect = 8.697e-12 Identity = 24/66 (36.36%), Postives = 27/66 (40.91%), Query Frame = 3 Query: 555 ALILAPTRELSSQIHV*SPRNFPNPTGVRGGVAFRRNHHSTHHLRKLLKKGVEYSFGQPPRKMGLI 752 ALI+APTREL QI R F P G R V H L+ G E P R + I Sbjct: 367 ALIMAPTRELVQQIET-EARKFAGPLGFR--VVSIVGGHQIEEQAYNLRDGAEIVVATPGRLLDCI 429
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: DBP9_SCLS1 (ATP-dependent RNA helicase dbp9 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=dbp9 PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 8.738e-12 Identity = 40/105 (38.10%), Postives = 57/105 (54.29%), Query Frame = 1 Query: 265 DIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPSWLLFLPPQE 579 D+PV T TFA + L L I + + PT VQ AIP+++ GRD++A A+TGSGKTAA+ PI+ I++ R S T S L+ +P +E Sbjct: 9 DVPVPTEEAEAANGKATFASLGLDARLLQGIAKQNFQSPTLVQSKAIPLTLEGRDILARAKTGSGKTAAYLLPILHSILK-----RKELSPTQCTSALILVPTRE 108 HSP 2 Score: 25.0238 bits (53), Expect = 8.738e-12 Identity = 10/15 (66.67%), Postives = 13/15 (86.67%), Query Frame = 3 Query: 555 ALILAPTRELSSQIH 599 ALIL PTREL+ Q++ Sbjct: 100 ALILVPTRELADQVY 114
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: PRP28_PICGU (Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Pichia guilliermondii GN=PRP28 PE=3 SV=2) HSP 1 Score: 66.2402 bits (160), Expect = 8.751e-12 Identity = 31/77 (40.26%), Postives = 47/77 (61.04%), Query Frame = 1 Query: 262 EDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIIS 492 ED + G N+P + ++ E + L I + Y +PTP+QR AIP ++G RD++ A+TGSGKT AF P++S Sbjct: 134 EDFSITCKGNNIPNPLRSWKESGIPTTLLNTIDQLGYKEPTPIQRAAIPTALGHRDVVGIAETGSGKTLAFLIPLLS 210 HSP 2 Score: 25.409 bits (54), Expect = 8.751e-12 Identity = 11/16 (68.75%), Postives = 14/16 (87.50%), Query Frame = 3 Query: 549 LLALILAPTRELSSQI 596 +L L+LAPTREL+ QI Sbjct: 233 VLGLVLAPTRELALQI 248 The following BLAST results are available for this feature:
BLAST of EY744421 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 133
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Sequences
The
following sequences are available for this feature:
EST sequence >EY744421 ID=EY744421; Name=EY744421; organism=Citrus sinensis; type=EST; length=996bpback to top |