EY744418 | Citrus Genome Database

Overview


Name	EY744418
Unique Name	EY744418
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	1040

Libraries


Library Name	Type
Sweet orange flower, greenhouse plant	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

BLAST of EY744418 vs. ExPASy Swiss-Prot
Match: UBIQ_LUPAL (Ubiquitin OS=Lupinus albus PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.411e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  108 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 335
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 131.724 bits (330), Expect = 6.784e-30
Identity = 70/77 (90.91%), Postives = 71/77 (92.21%), Query Frame = 3

Query:  336 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADLPHFSKESTLHLVLRLPWG 566
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD  +  KESTLHLVLRL  G
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY-NIQKESTLHLVLRLRGG 76

BLAST of EY744418 vs. ExPASy Swiss-Prot
Match: UBIQ_LINUS (Ubiquitin OS=Linum usitatissimum PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.411e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  108 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 335
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 131.724 bits (330), Expect = 6.784e-30
Identity = 70/77 (90.91%), Postives = 71/77 (92.21%), Query Frame = 3

Query:  336 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADLPHFSKESTLHLVLRLPWG 566
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD  +  KESTLHLVLRL  G
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY-NIQKESTLHLVLRLRGG 76

BLAST of EY744418 vs. ExPASy Swiss-Prot
Match: UBIQ_HORVU (Ubiquitin OS=Hordeum vulgare GN=MUB1 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.411e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  108 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 335
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 131.724 bits (330), Expect = 6.784e-30
Identity = 70/77 (90.91%), Postives = 71/77 (92.21%), Query Frame = 3

Query:  336 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADLPHFSKESTLHLVLRLPWG 566
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD  +  KESTLHLVLRL  G
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY-NIQKESTLHLVLRLRGG 76

BLAST of EY744418 vs. ExPASy Swiss-Prot
Match: UBIQ_HELAN (Ubiquitin OS=Helianthus annuus PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.411e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  108 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 335
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 131.724 bits (330), Expect = 6.784e-30
Identity = 70/77 (90.91%), Postives = 71/77 (92.21%), Query Frame = 3

Query:  336 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADLPHFSKESTLHLVLRLPWG 566
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD  +  KESTLHLVLRL  G
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY-NIQKESTLHLVLRLRGG 76

BLAST of EY744418 vs. ExPASy Swiss-Prot
Match: UBIQ_DESAN (Ubiquitin OS=Deschampsia antarctica PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.411e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  108 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 335
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 131.724 bits (330), Expect = 6.784e-30
Identity = 70/77 (90.91%), Postives = 71/77 (92.21%), Query Frame = 3

Query:  336 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADLPHFSKESTLHLVLRLPWG 566
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD  +  KESTLHLVLRL  G
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY-NIQKESTLHLVLRLRGG 76

BLAST of EY744418 vs. ExPASy Swiss-Prot
Match: UBIQ_DAUCA (Ubiquitin OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.411e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  108 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 335
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 131.724 bits (330), Expect = 6.784e-30
Identity = 70/77 (90.91%), Postives = 71/77 (92.21%), Query Frame = 3

Query:  336 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADLPHFSKESTLHLVLRLPWG 566
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD  +  KESTLHLVLRL  G
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY-NIQKESTLHLVLRLRGG 76

BLAST of EY744418 vs. ExPASy Swiss-Prot
Match: UBIQ_BRARA (Ubiquitin OS=Brassica rapa PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.411e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  108 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 335
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 131.724 bits (330), Expect = 6.784e-30
Identity = 70/77 (90.91%), Postives = 71/77 (92.21%), Query Frame = 3

Query:  336 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADLPHFSKESTLHLVLRLPWG 566
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD  +  KESTLHLVLRL  G
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY-NIQKESTLHLVLRLRGG 76

BLAST of EY744418 vs. ExPASy Swiss-Prot
Match: UBIQ_AVESA (Ubiquitin OS=Avena sativa PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.411e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  108 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 335
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 131.724 bits (330), Expect = 6.784e-30
Identity = 70/77 (90.91%), Postives = 71/77 (92.21%), Query Frame = 3

Query:  336 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADLPHFSKESTLHLVLRLPWG 566
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD  +  KESTLHLVLRL  G
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY-NIQKESTLHLVLRLRGG 76

BLAST of EY744418 vs. ExPASy Swiss-Prot
Match: UBIQ_AVEFA (Ubiquitin OS=Avena fatua PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.411e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  108 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 335
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 131.724 bits (330), Expect = 6.784e-30
Identity = 70/77 (90.91%), Postives = 71/77 (92.21%), Query Frame = 3

Query:  336 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADLPHFSKESTLHLVLRLPWG 566
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD  +  KESTLHLVLRL  G
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY-NIQKESTLHLVLRLRGG 76

BLAST of EY744418 vs. ExPASy Swiss-Prot
Match: UBIQ_ASPOF (Ubiquitin OS=Asparagus officinalis PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.411e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  108 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 335
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 131.724 bits (330), Expect = 6.784e-30
Identity = 70/77 (90.91%), Postives = 71/77 (92.21%), Query Frame = 3

Query:  336 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADLPHFSKESTLHLVLRLPWG 566
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD  +  KESTLHLVLRL  G
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY-NIQKESTLHLVLRLRGG 76

The following BLAST results are available for this feature:

BLAST of EY744418 vs. ExPASy Swiss-Prot

BLAST of EY744418 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95


Match Name	E-value	Identity	Description
UBIQ_LUPAL	1.411e-35	100.00	Ubiquitin OS=Lupinus albus PE=3 SV=1	[more]
UBIQ_LINUS	1.411e-35	100.00	Ubiquitin OS=Linum usitatissimum PE=3 SV=1	[more]
UBIQ_HORVU	1.411e-35	100.00	Ubiquitin OS=Hordeum vulgare GN=MUB1 PE=3 SV=1	[more]
UBIQ_HELAN	1.411e-35	100.00	Ubiquitin OS=Helianthus annuus PE=3 SV=1	[more]
UBIQ_DESAN	1.411e-35	100.00	Ubiquitin OS=Deschampsia antarctica PE=2 SV=1	[more]
UBIQ_DAUCA	1.411e-35	100.00	Ubiquitin OS=Daucus carota PE=3 SV=1	[more]
UBIQ_BRARA	1.411e-35	100.00	Ubiquitin OS=Brassica rapa PE=3 SV=1	[more]
UBIQ_AVESA	1.411e-35	100.00	Ubiquitin OS=Avena sativa PE=1 SV=1	[more]
UBIQ_AVEFA	1.411e-35	100.00	Ubiquitin OS=Avena fatua PE=3 SV=1	[more]
UBIQ_ASPOF	1.411e-35	100.00	Ubiquitin OS=Asparagus officinalis PE=3 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C5-003-008-D07-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY744418 ID=EY744418; Name=EY744418; organism=Citrus sinensis; type=EST; length=1040bp
CCCGCGTCCGCTTCACCGGAAAGCAGCTCGAGGACGGGCGCACCTTGGCG
GATTACAACATCCAGAAGGAGTCGACTCTCCACCTCGTCCTCCGTCTCCG
CGGCGGCATGCAGATCTTCGTCAAGACTCTGACCGGGAAGACGATCACCC
TGGAGGTGGAGAGCTCCGACACGATCGACAACGTGAAGGCGAAGATCCAG
GACAAGGAAGGGATCCCCCCGGACCAGCAGAGGCTCATCTTCGCCGGCAA
GCAGCTGGAGGACGGCCGCACCCTGGCCGATTATAACATCCAGAAGGAAT
CCACGCTCCACCTTGTGTTGCGCCTGAGGGGAGGAATGCAGATCTTCGTC
AAGACGTTGACCGGGAAGACGATCACCCTGGAGGTGGAGAGCTCCGACAC
GATCGACAACGTGAAGGCCAAGATCCAGGACAAAGAGGGGATTCCTCCGG
ACCAGCAGAGGCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGGACT
CTCGCCGATTTACCACATTTCTCAAAGGAGTCCACTCTCCACCTTGTCCT
CCGTCTCCCGTGGGGGGGACTTCTAATAATTTAAATGGTGGATGGGTCCG
CTTTTGATTGGATGGCGCCTATAATACTTAATTAAGTTTGGATCGGGGGG
CTTTGCTTTTAATTTTTTTTGGTAATTTCAAATGGGGTAGGGGGCCCACC
CGCTTGGGGGCCTTAATTTCCTCCTTTCTATGGGGAAATAAACAAATATA
AGCCACTAGTTTTTTGAACCAACCACCAAACGAAAGCATGAGCACACAGA
AAAACAACCAATGCATAATATTCTTCAGCGGCCAACCCCGCGCTCCACCC
GCCGGCACTCCCCCACCCCTCCTCCCCTACTTACCCCCCCGGGGGGGCCG
CCGCCCTCTCTACCACCCCCCTGTCTCTTTACATATTCTCCCGGGACGGT
CGGGACAAGTATTAACATTTCTCCTTTCTTTAATTAGGTTACCACCACCT
CAGATCAGCATTTTTTTTCCTTTCCCCCGGGCGCCCGCCG