EY744418 | Citrus Genome Database

Overview


Name	EY744418
Unique Name	EY744418
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	1040

Libraries


Library Name	Type
Sweet orange flower, greenhouse plant	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

BLAST of EY744418 vs. ExPASy Swiss-Prot
Match: UBIQ_RABIT (Ubiquitin OS=Oryctolagus cuniculus PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 3.476e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  108 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 335
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 127.102 bits (318), Expect = 1.671e-28
Identity = 67/77 (87.01%), Postives = 70/77 (90.91%), Query Frame = 3

Query:  336 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADLPHFSKESTLHLVLRLPWG 566
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+D  +  KESTLHLVLRL  G
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY-NIQKESTLHLVLRLRGG 76

BLAST of EY744418 vs. ExPASy Swiss-Prot
Match: UBIQ_PONPY (Ubiquitin OS=Pongo pygmaeus GN=UBA52 PE=3 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 3.476e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  108 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 335
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 127.102 bits (318), Expect = 1.671e-28
Identity = 67/77 (87.01%), Postives = 70/77 (90.91%), Query Frame = 3

Query:  336 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADLPHFSKESTLHLVLRLPWG 566
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+D  +  KESTLHLVLRL  G
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY-NIQKESTLHLVLRLRGG 76

BLAST of EY744418 vs. ExPASy Swiss-Prot
Match: UBIQ_PLUXY (Ubiquitin OS=Plutella xylostella PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 3.476e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  108 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 335
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 127.102 bits (318), Expect = 1.671e-28
Identity = 67/77 (87.01%), Postives = 70/77 (90.91%), Query Frame = 3

Query:  336 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADLPHFSKESTLHLVLRLPWG 566
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+D  +  KESTLHLVLRL  G
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY-NIQKESTLHLVLRLRGG 76

BLAST of EY744418 vs. ExPASy Swiss-Prot
Match: UBIQ_PIG (Ubiquitin OS=Sus scrofa GN=UBA52 PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 3.476e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  108 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 335
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 127.102 bits (318), Expect = 1.671e-28
Identity = 67/77 (87.01%), Postives = 70/77 (90.91%), Query Frame = 3

Query:  336 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADLPHFSKESTLHLVLRLPWG 566
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+D  +  KESTLHLVLRL  G
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY-NIQKESTLHLVLRLRGG 76

BLAST of EY744418 vs. ExPASy Swiss-Prot
Match: UBIQ_PANTR (Ubiquitin OS=Pan troglodytes GN=UBB PE=1 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 3.476e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  108 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 335
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 127.102 bits (318), Expect = 1.671e-28
Identity = 67/77 (87.01%), Postives = 70/77 (90.91%), Query Frame = 3

Query:  336 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADLPHFSKESTLHLVLRLPWG 566
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+D  +  KESTLHLVLRL  G
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY-NIQKESTLHLVLRLRGG 76

BLAST of EY744418 vs. ExPASy Swiss-Prot
Match: UBIQ_OPHHA (Ubiquitin OS=Ophiophagus hannah PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 3.476e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  108 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 335
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 127.102 bits (318), Expect = 1.671e-28
Identity = 67/77 (87.01%), Postives = 70/77 (90.91%), Query Frame = 3

Query:  336 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADLPHFSKESTLHLVLRLPWG 566
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+D  +  KESTLHLVLRL  G
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY-NIQKESTLHLVLRLRGG 76

BLAST of EY744418 vs. ExPASy Swiss-Prot
Match: UBIQ_MOUSE (Ubiquitin OS=Mus musculus GN=Rps27a PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 3.476e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  108 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 335
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 127.102 bits (318), Expect = 1.671e-28
Identity = 67/77 (87.01%), Postives = 70/77 (90.91%), Query Frame = 3

Query:  336 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADLPHFSKESTLHLVLRLPWG 566
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+D  +  KESTLHLVLRL  G
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY-NIQKESTLHLVLRLRGG 76

BLAST of EY744418 vs. ExPASy Swiss-Prot
Match: UBIQ_MANSE (Ubiquitin OS=Manduca sexta PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 3.476e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  108 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 335
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 127.102 bits (318), Expect = 1.671e-28
Identity = 67/77 (87.01%), Postives = 70/77 (90.91%), Query Frame = 3

Query:  336 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADLPHFSKESTLHLVLRLPWG 566
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+D  +  KESTLHLVLRL  G
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY-NIQKESTLHLVLRLRGG 76

BLAST of EY744418 vs. ExPASy Swiss-Prot
Match: UBIQ_MACFA (Ubiquitin OS=Macaca fascicularis GN=UBA52 PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 3.476e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  108 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 335
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 127.102 bits (318), Expect = 1.671e-28
Identity = 67/77 (87.01%), Postives = 70/77 (90.91%), Query Frame = 3

Query:  336 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADLPHFSKESTLHLVLRLPWG 566
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+D  +  KESTLHLVLRL  G
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY-NIQKESTLHLVLRLRGG 76

BLAST of EY744418 vs. ExPASy Swiss-Prot
Match: UBIQ_ICTPU (Ubiquitin OS=Ictalurus punctatus GN=rps27a PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 3.476e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  108 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 335
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 127.102 bits (318), Expect = 1.671e-28
Identity = 67/77 (87.01%), Postives = 70/77 (90.91%), Query Frame = 3

Query:  336 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADLPHFSKESTLHLVLRLPWG 566
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+D  +  KESTLHLVLRL  G
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY-NIQKESTLHLVLRLRGG 76

The following BLAST results are available for this feature:

BLAST of EY744418 vs. ExPASy Swiss-Prot

BLAST of EY744418 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95


Match Name	E-value	Identity	Description
UBIQ_RABIT	3.476e-34	96.05	Ubiquitin OS=Oryctolagus cuniculus PE=1 SV=1	[more]
UBIQ_PONPY	3.476e-34	96.05	Ubiquitin OS=Pongo pygmaeus GN=UBA52 PE=3 SV=2	[more]
UBIQ_PLUXY	3.476e-34	96.05	Ubiquitin OS=Plutella xylostella PE=3 SV=1	[more]
UBIQ_PIG	3.476e-34	96.05	Ubiquitin OS=Sus scrofa GN=UBA52 PE=3 SV=1	[more]
UBIQ_PANTR	3.476e-34	96.05	Ubiquitin OS=Pan troglodytes GN=UBB PE=1 SV=2	[more]
UBIQ_OPHHA	3.476e-34	96.05	Ubiquitin OS=Ophiophagus hannah PE=3 SV=1	[more]
UBIQ_MOUSE	3.476e-34	96.05	Ubiquitin OS=Mus musculus GN=Rps27a PE=1 SV=1	[more]
UBIQ_MANSE	3.476e-34	96.05	Ubiquitin OS=Manduca sexta PE=3 SV=1	[more]
UBIQ_MACFA	3.476e-34	96.05	Ubiquitin OS=Macaca fascicularis GN=UBA52 PE=3 SV=...	[more]
UBIQ_ICTPU	3.476e-34	96.05	Ubiquitin OS=Ictalurus punctatus GN=rps27a PE=3 SV...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C5-003-008-D07-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY744418 ID=EY744418; Name=EY744418; organism=Citrus sinensis; type=EST; length=1040bp
CCCGCGTCCGCTTCACCGGAAAGCAGCTCGAGGACGGGCGCACCTTGGCG
GATTACAACATCCAGAAGGAGTCGACTCTCCACCTCGTCCTCCGTCTCCG
CGGCGGCATGCAGATCTTCGTCAAGACTCTGACCGGGAAGACGATCACCC
TGGAGGTGGAGAGCTCCGACACGATCGACAACGTGAAGGCGAAGATCCAG
GACAAGGAAGGGATCCCCCCGGACCAGCAGAGGCTCATCTTCGCCGGCAA
GCAGCTGGAGGACGGCCGCACCCTGGCCGATTATAACATCCAGAAGGAAT
CCACGCTCCACCTTGTGTTGCGCCTGAGGGGAGGAATGCAGATCTTCGTC
AAGACGTTGACCGGGAAGACGATCACCCTGGAGGTGGAGAGCTCCGACAC
GATCGACAACGTGAAGGCCAAGATCCAGGACAAAGAGGGGATTCCTCCGG
ACCAGCAGAGGCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGGACT
CTCGCCGATTTACCACATTTCTCAAAGGAGTCCACTCTCCACCTTGTCCT
CCGTCTCCCGTGGGGGGGACTTCTAATAATTTAAATGGTGGATGGGTCCG
CTTTTGATTGGATGGCGCCTATAATACTTAATTAAGTTTGGATCGGGGGG
CTTTGCTTTTAATTTTTTTTGGTAATTTCAAATGGGGTAGGGGGCCCACC
CGCTTGGGGGCCTTAATTTCCTCCTTTCTATGGGGAAATAAACAAATATA
AGCCACTAGTTTTTTGAACCAACCACCAAACGAAAGCATGAGCACACAGA
AAAACAACCAATGCATAATATTCTTCAGCGGCCAACCCCGCGCTCCACCC
GCCGGCACTCCCCCACCCCTCCTCCCCTACTTACCCCCCCGGGGGGGCCG
CCGCCCTCTCTACCACCCCCCTGTCTCTTTACATATTCTCCCGGGACGGT
CGGGACAAGTATTAACATTTCTCCTTTCTTTAATTAGGTTACCACCACCT
CAGATCAGCATTTTTTTTCCTTTCCCCCGGGCGCCCGCCG