EY744411
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UBE2C_BOVIN (Ubiquitin-conjugating enzyme E2 C OS=Bos taurus GN=UBE2C PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.715e-24 Identity = 53/127 (41.73%), Postives = 79/127 (62.20%), Query Frame = 2 Query: 200 PARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMF 580 P KRL ++ L GIS P+ +++ W I G T ++ +KL+L+F YP PTV+F++ +HPN+ G+ICLDIL+++WS +YDV IL SIQSLL +PN +SP N+ AA ++ Sbjct: 30 PVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELW 156
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UBE2C_HUMAN (Ubiquitin-conjugating enzyme E2 C OS=Homo sapiens GN=UBE2C PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.546e-24 Identity = 53/127 (41.73%), Postives = 78/127 (61.42%), Query Frame = 2 Query: 200 PARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMF 580 P KRL ++ L GIS P+ +++ W I G T ++ +KL+L+F YP PTV+F++ +HPN+ G+ICLDIL+ +WS +YDV IL SIQSLL +PN +SP N+ AA ++ Sbjct: 30 PVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKEKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELW 156
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UBE2C_XENLA (Ubiquitin-conjugating enzyme E2 C OS=Xenopus laevis GN=ube2c PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.631e-24 Identity = 55/135 (40.74%), Postives = 83/135 (61.48%), Query Frame = 2 Query: 209 KRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFTENKREYNREI 613 KRL ++ L GIS P+ +++ W I G T ++ +KL+L+F YP PTV+FV+ FHPN+ + G+ICLDIL+++WS +YDV IL S+QSLL +PN SP N AA ++ +N+ Y + + Sbjct: 33 KRLQQELMTLMMSGDKGISAFPESDNLFKWIGTIDGAVGTVYEDLRYKLSLEFPSGYPYNAPTVKFVTPCFHPNVDSHGNICLDILKDKWSALYDVRTILLSLQSLLGEPNNESPLNPYAAELW-QNQTAYKKHL 166
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UBCB_DICDI (Ubiquitin conjugating enzyme E2 B OS=Dictyostelium discoideum GN=ubcB PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.631e-24 Identity = 48/136 (35.29%), Postives = 87/136 (63.97%), Query Frame = 2 Query: 203 ARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFTENKREYNR 607 A KRL ++ + + PP+ S D+++ W A + GP+ +P++ G F + + DYP KPPT++F ++++HPNI +DG+IC ++ + WSP + +LT+I+S+L DPNP++P +E A+ F ++ +N+ Sbjct: 3 AHKRLQKEITDMLKTPPSWCSAHLVDDNLQKWKATVQGPEGSPFEKGVFSMDIDIPADYPFKPPTLKFTTKIYHPNIKTSDGAICAEVF-STWSPQLKILDVLTTIRSILTDPNPDNPLETEIAQQFKTDRNAFNK 137
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UBE2C_MOUSE (Ubiquitin-conjugating enzyme E2 C OS=Mus musculus GN=Ube2c PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 6.048e-24 Identity = 53/127 (41.73%), Postives = 79/127 (62.20%), Query Frame = 2 Query: 200 PARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMF 580 P KRL ++ L GIS P+ +++ W I G T ++ +KL+L+F YP PTV+F++ +HPN+ G+ICLDIL+++WS +YDV IL SIQSLL +PN +SP N+ AA ++ Sbjct: 30 PVGKRLQQELMILMTSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELW 156
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UB2R2_RABIT (Ubiquitin-conjugating enzyme E2 R2 OS=Oryctolagus cuniculus GN=UBE2R2 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.899e-24 Identity = 59/147 (40.14%), Postives = 85/147 (57.82%), Query Frame = 2 Query: 182 AVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNSIML-WNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMF 580 A + T ++K LM + K LQ++P G D S + W IFGP +T ++GG FK ++F DYP PPT RF+++M+HPNIY +G +C+ IL +W+P +V IL S+ SLL +PN SPAN +A+ MF Sbjct: 2 AQQQMTSSQKALMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMF 148
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UB2R2_MOUSE (Ubiquitin-conjugating enzyme E2 R2 OS=Mus musculus GN=Ube2r2 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.899e-24 Identity = 59/147 (40.14%), Postives = 85/147 (57.82%), Query Frame = 2 Query: 182 AVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNSIML-WNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMF 580 A + T ++K LM + K LQ++P G D S + W IFGP +T ++GG FK ++F DYP PPT RF+++M+HPNIY +G +C+ IL +W+P +V IL S+ SLL +PN SPAN +A+ MF Sbjct: 2 AQQQMTSSQKALMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMF 148
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UB2R2_HUMAN (Ubiquitin-conjugating enzyme E2 R2 OS=Homo sapiens GN=UBE2R2 PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.899e-24 Identity = 59/147 (40.14%), Postives = 85/147 (57.82%), Query Frame = 2 Query: 182 AVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNSIML-WNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMF 580 A + T ++K LM + K LQ++P G D S + W IFGP +T ++GG FK ++F DYP PPT RF+++M+HPNIY +G +C+ IL +W+P +V IL S+ SLL +PN SPAN +A+ MF Sbjct: 2 AQQQMTSSQKALMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMF 148
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UB2G1_RAT (Ubiquitin-conjugating enzyme E2 G1 OS=Rattus norvegicus GN=Ube2g1 PE=2 SV=3) HSP 1 Score: 110.538 bits (275), Expect = 1.347e-23 Identity = 54/148 (36.49%), Postives = 87/148 (58.78%), Query Frame = 2 Query: 215 LMRDFKRLQQDPPAGIS-GAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFTENKR-EYNREI 613 L R L ++P G S G DN + W +I GP DT ++GG FK L F +DYP +PP ++F++ ++HPN+ +G +C+ IL + +W PI+ V I+ S+ S+L DPN +SPAN +AA+ + E++ E+ R++ Sbjct: 10 LRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKV 157
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UB2G1_MOUSE (Ubiquitin-conjugating enzyme E2 G1 OS=Mus musculus GN=Ube2g1 PE=2 SV=3) HSP 1 Score: 110.538 bits (275), Expect = 1.347e-23 Identity = 54/148 (36.49%), Postives = 87/148 (58.78%), Query Frame = 2 Query: 215 LMRDFKRLQQDPPAGIS-GAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFTENKR-EYNREI 613 L R L ++P G S G DN + W +I GP DT ++GG FK L F +DYP +PP ++F++ ++HPN+ +G +C+ IL + +W PI+ V I+ S+ S+L DPN +SPAN +AA+ + E++ E+ R++ Sbjct: 10 LRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKV 157 The following BLAST results are available for this feature:
BLAST of EY744411 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 253
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Sequences
The
following sequences are available for this feature:
EST sequence >EY744411 ID=EY744411; Name=EY744411; organism=Citrus sinensis; type=EST; length=920bpback to top |