EY744411
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UBC5_ARATH (Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana GN=UBC5 PE=2 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 1.443e-17 Identity = 43/144 (29.86%), Postives = 82/144 (56.94%), Query Frame = 2 Query: 191 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAIL-TSIQSLLCDPNPNSPANSEAARMFTENKREYNREIR 616 MS+P+++R M K + D + + ++ GP D+ ++GG +K+ ++ + YP K P+V F+++++HPN+ GS+CLD++ WSP++D+ + T + LL PNP+ P N EAA + ++ Y + ++ Sbjct: 1 MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFFVEFS----GPKDSIYEGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPTYEQRVK 140
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UBC12_XENTR (NEDD8-conjugating enzyme Ubc12 OS=Xenopus tropicalis GN=ube2m PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.443e-17 Identity = 41/143 (28.67%), Postives = 79/143 (55.24%), Query Frame = 2 Query: 188 RMSTPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFTENKREYNREIR 616 + ++ A+ R+ +D L I + D+ +L ++ PD+ + GG F + + + YP+ PP V+ + ++HPNI +G++CL+IL+ W P+ + +I+ +Q L +PNP P N EAA + N+R + + ++ Sbjct: 25 KKASAAQLRIQKDINELNLPKTCEIEFSDHDD--LLNFKLVICPDEGFYKGGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQ 165
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UBC12_XENLA (NEDD8-conjugating enzyme Ubc12 OS=Xenopus laevis GN=ube2m PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.884e-17 Identity = 41/143 (28.67%), Postives = 79/143 (55.24%), Query Frame = 2 Query: 188 RMSTPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFTENKREYNREIR 616 + ++ A+ R+ +D L I + D+ +L ++ PD+ + GG F + + + YP+ PP V+ + ++HPNI +G++CL+IL+ W P+ + +I+ +Q L +PNP P N EAA + N+R + + ++ Sbjct: 25 KKASAAQLRIQKDITELNLPKTCEIEFSDHDD--LLNFKLVICPDEGFYKGGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQ 165
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UBC12_MOUSE (NEDD8-conjugating enzyme Ubc12 OS=Mus musculus GN=Ube2m PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.461e-17 Identity = 41/143 (28.67%), Postives = 79/143 (55.24%), Query Frame = 2 Query: 188 RMSTPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFTENKREYNREIR 616 + ++ A+ R+ +D L IS + D+ +L ++ PD+ + G F + + + YP+ PP V+ + ++HPNI +G++CL+IL+ W P+ + +I+ +Q L +PNP P N EAA + N+R + + ++ Sbjct: 25 KKASAAQLRIQKDINELNLPKTCDISFSDPDD--LLNFKLVICPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQ 165
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UBC12_HUMAN (NEDD8-conjugating enzyme Ubc12 OS=Homo sapiens GN=UBE2M PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.461e-17 Identity = 41/143 (28.67%), Postives = 79/143 (55.24%), Query Frame = 2 Query: 188 RMSTPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFTENKREYNREIR 616 + ++ A+ R+ +D L IS + D+ +L ++ PD+ + G F + + + YP+ PP V+ + ++HPNI +G++CL+IL+ W P+ + +I+ +Q L +PNP P N EAA + N+R + + ++ Sbjct: 25 KKASAAQLRIQKDINELNLPKTCDISFSDPDD--LLNFKLVICPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQ 165
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UBC12_BOVIN (NEDD8-conjugating enzyme Ubc12 OS=Bos taurus GN=UBE2M PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.461e-17 Identity = 41/143 (28.67%), Postives = 79/143 (55.24%), Query Frame = 2 Query: 188 RMSTPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFTENKREYNREIR 616 + ++ A+ R+ +D L IS + D+ +L ++ PD+ + G F + + + YP+ PP V+ + ++HPNI +G++CL+IL+ W P+ + +I+ +Q L +PNP P N EAA + N+R + + ++ Sbjct: 25 KKASAAQLRIQKDINELNLPKTCDISFSDPDD--LLNFKLVICPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQ 165
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UBCD4_DROME (Ubiquitin-conjugating enzyme E2-22 kDa OS=Drosophila melanogaster GN=UbcD4 PE=1 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 4.198e-17 Identity = 49/136 (36.03%), Postives = 77/136 (56.62%), Query Frame = 2 Query: 191 MSTPARKRLMRDFK---RLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYA-DGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFTE 586 M+ A R+ R+FK R ++ I ++S I GP DTP++GG F L ++ E YP PP VRF++R++HPNI + G+ICLDIL++ W+ + +L S+Q+LL P+ P ++ A F + Sbjct: 1 MANMAVSRIKREFKEVMRSEEIVQCSIKIELVNDSWTELRGEIAGPPDTPYEGGKFVLEIKVPETYPFNPPKVRFITRIWHPNISSVTGAICLDILKDNWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVAYQFKD 136
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UBC12_SCHPO (NEDD8-conjugating enzyme ubc12 OS=Schizosaccharomyces pombe GN=ubc12 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.221e-16 Identity = 43/140 (30.71%), Postives = 81/140 (57.86%), Query Frame = 2 Query: 197 TPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFTENKREYNREIR 616 +PA+ R+ +D L+ P+ +S + D + + PD+ + GG FK +Q ++YP+ PP V+ +++++HPNI +G++CL+IL+ W+P+ ++ +IL +Q L PN P N EAA ++ + + +R Sbjct: 22 SPAQIRIQKDVTDLEI--PSTMSTSWPDPIKLNVLHLEIRPDEGYYKGGKFKFRIQIDDNYPHDPPKVKCLNKIYHPNIDIEGNVCLNILRQDWNPVLNLNSILVGLQFLFLSPNAEDPLNKEAAADLHKDPQGFASRVR 159
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UBC1_MIMIV (Probable ubiquitin-conjugating enzyme E2 L460 OS=Acanthamoeba polyphaga mimivirus GN=UBC PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.595e-16 Identity = 41/114 (35.96%), Postives = 69/114 (60.53%), Query Frame = 2 Query: 278 DNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQ-WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFTENKREYNREIR 616 D +I LW I GP+++ ++ F+L ++ + DYP P V+F++ + H N+ G ICL+IL+ W+ ++ +I+ SI LL PNP P NSE A ++ +K Y+++IR Sbjct: 33 DENIFLWKVNIKGPENSLYENYNFELEIELSNDYPYSSPKVKFITPIQHMNVNDKGDICLNILKKDGWNASLNIISIIWSIIVLLDQPNPEDPFNSELASLYRNDKLSYDKKIR 146
BLAST of EY744411 vs. ExPASy Swiss-Prot
Match: UB2L6_MOUSE (Ubiquitin/ISG15-conjugating enzyme E2 L6 OS=Mus musculus GN=Ube2l6 PE=2 SV=3) HSP 1 Score: 87.0409 bits (214), Expect = 1.595e-16 Identity = 40/138 (28.99%), Postives = 78/138 (56.52%), Query Frame = 2 Query: 203 ARKRLMRDFKRLQQD-PPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQ-WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFTENKREYNRE 610 A KR+ ++ + L ++ PP + D ++++W+ ++ PD P+ F++ + F +YP KPPT+RF ++++HPN+ DG +CL ++ N+ W P +L ++ L+ PN P E A + T+N + ++ Sbjct: 3 ASKRVAKELESLSKELPPYLRQLSSDDANVLVWHMLLL-PDQLPYGLKAFQVRIDFPREYPFKPPTLRFTTKIYHPNVREDGLVCLPLISNENWKPYTKPYQVLEALNVLVSKPNLEEPVRLELADLLTQNPEMFRKK 139 The following BLAST results are available for this feature:
BLAST of EY744411 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 253
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Sequences
The
following sequences are available for this feature:
EST sequence >EY744411 ID=EY744411; Name=EY744411; organism=Citrus sinensis; type=EST; length=920bpback to top |