EY744400

Overview
NameEY744400
Unique NameEY744400
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length930
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY744400 vs. ExPASy Swiss-Prot
Match: MTHR2_SCHPO (Methylenetetrahydrofolate reductase 2 OS=Schizosaccharomyces pombe GN=met11 PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.427e-12
Identity = 34/86 (39.53%), Postives = 52/86 (60.47%), Query Frame = 1 
Query:   13 PFISFMAVNKEGNWKANVNQTDVNAVTWGVFRAKEIIQPTVVDPASFKVWKDEAFEIWSRSWASLYPEGDSSRKLLEEVHSSYYLV 270
            P +++ A N +  +  N  +   +AVTWGV+  +EIIQ T++   SFK W  E+F++W   WA+LY +   SRKLLE   +  +LV
Sbjct:  536 PQVTYYAGNNKSEFLTNAPKDGASAVTWGVYPGREIIQSTIIAEVSFKAWLSESFQVWG-EWANLYSKNTPSRKLLENCINDRWLV 620
[Close]
BLAST of EY744400 vs. ExPASy Swiss-Prot
Match: MTHR1_YEAST (Methylenetetrahydrofolate reductase 1 OS=Saccharomyces cerevisiae GN=MET12 PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 2.434e-12
Identity = 34/83 (40.96%), Postives = 49/83 (59.04%), Query Frame = 1 
Query:   22 SFMAVNKEGNWKANVNQTDVNAVTWGVFRAKEIIQPTVVDPASFKVWKDEAFEIWSRSWASLYPEGDSSRKLLEEVHSSYYLV 270
            S+ A +  G+++ N++    + VTWGVF    + Q T+++  SFK W+DEAF IWS  WA L+P    +  LL  VH  Y LV
Sbjct:  555 SYYAGDSSGSFETNLDPHSSSVVTWGVFPNSPVKQTTIIEEESFKAWRDEAFSIWS-EWAKLFPRNTPANILLRLVHKDYCLV 636
The following BLAST results are available for this feature:
BLAST of EY744400 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
MTHR2_SCHPO1.427e-1239.53Methylenetetrahydrofolate reductase 2 OS=Schizosac... [more]
MTHR1_YEAST2.434e-1240.96Methylenetetrahydrofolate reductase 1 OS=Saccharom... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-008-B12-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744400 ID=EY744400; Name=EY744400; organism=Citrus sinensis; type=EST; length=930bp
CCACGCGTCCGTCCATTCATAAGCTTCATGGCTGTCAACAAAGAAGGAAA
CTGGAAAGCCAATGTTAATCAAACTGATGTGAATGCCGTAACTTGGGGGG
TCTTCCGAGCCAAGGAGATTATCCAACCGACTGTTGTTGACCCTGCCAGC
TTCAAGGTGTGGAAGGATGAGGCATTTGAAATTTGGTCAAGATCATGGGC
TTCATTGTACCCTGAGGGAGACTCATCAAGAAAATTGCTTGAAGAGGTGC
ACAGCAGCTATTATTTGGTCGGCTTCGGGGATCAATGATTACACTCATGG
GGATCTCTTTTGCTGTATTTCCCCACCTACACGCCAGCACACTGACCTCC
CTGGAACCCGCCTCCATCCCCCCATCGAGCATCCTCAACACCCACCCCCC
CAAAACACACACGACGCAAGACCGCGCCCCCCCACCGACCCAAACCAGCC
CACCACGAAGCCCAACTACACACGATACAACCACGTATCGAAACACACAT
CAAAGGCCGGGACCCCGCACCGCGACCGACCCGAGCCCGCCCCCCCCCAA
ACGGACCGCCCCGGCCCGACCCTTCTGCCCCCCCCACACTCTCCCCGACC
AACGCCGTCCCCCCTCACCACCACAAGACAGACCATATCGCAGACGCCAA
GCACGCGGCGCAGCCACCACCCCAACTACCCCCACCACCGCCGCCGGGCC
ACCCCCCCACGAGAAACCAACCACACCCACGCCAACCTCCGCACACTAAC
ACCCCACAGGGCCCCACCACTCACCCACACGACGAACCCGAACTCCCCTA
CCACCAGCAAGCAACGCACGCCCCCCAACCACACCCCGCCGTCACCCAGA
ACACGCCGGCCAGCACGACGGCGCACGGACCGCCACACGCGCGACCCCCA
CCACCCCGCTCCAACCCCACCCCCCCAACC
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