EY744376

Overview
NameEY744376
Unique NameEY744376
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length977
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744376 vs. ExPASy Swiss-Prot
Match: UBC2_YEAST (Ubiquitin-conjugating enzyme E2 2 OS=Saccharomyces cerevisiae GN=RAD6 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 8.713e-16
Identity = 37/104 (35.58%), Postives = 61/104 (58.65%), Query Frame = 3
Query:  195 KQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVR 506
            ++L ++ K + E  P G+      D+     A I GPA TPYE+G FR+ L    ++P+ PP   FL+++FHPN+  NGEIC++ L+  W P+  +  +L  ++
Sbjct:    7 RRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQ 110          
BLAST of EY744376 vs. ExPASy Swiss-Prot
Match: UBC2_ASHGO (Ubiquitin-conjugating enzyme E2 2 OS=Ashbya gossypii GN=UBC2 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 8.713e-16
Identity = 37/104 (35.58%), Postives = 61/104 (58.65%), Query Frame = 3
Query:  195 KQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVR 506
            ++L ++ K + E  P G+      D+     A I GPA TPYE+G FR+ L    ++P+ PP   FL+++FHPN+  NGEIC++ L+  W P+  +  +L  ++
Sbjct:    7 RRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQ 110          
BLAST of EY744376 vs. ExPASy Swiss-Prot
Match: UB2D3_BOVIN (Ubiquitin-conjugating enzyme E2 D3 OS=Bos taurus GN=UBE2D3 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 8.713e-16
Identity = 40/104 (38.46%), Postives = 59/104 (56.73%), Query Frame = 3
Query:  192 IKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVV 503
            +K++ KEL  L   PP     G   DD     A I GP  +PY+ GVF + +    D+P  PPK  F T+I+HPNI +N  IC++ L+  W+P+L +  VL+ +
Sbjct:    3 LKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNDSICLDILRSQWSPALTISKVLLSI 106          
BLAST of EY744376 vs. ExPASy Swiss-Prot
Match: UBC2_USTMA (Ubiquitin-conjugating enzyme E2 2 OS=Ustilago maydis GN=UBC2 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.138e-15
Identity = 38/104 (36.54%), Postives = 61/104 (58.65%), Query Frame = 3
Query:  195 KQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVR 506
            K+L ++ K L   PP GI      D+     A I GPA TP+E+G F++ L     +P+ PP   FL+K+FHPN+  NGE+C++ L+  W+P+  +  +L  ++
Sbjct:    7 KRLIRDFKRLSTDPPGGISGAPCADNLMIWNAVIFGPADTPFEDGTFKLVLTFDESYPNKPPTVKFLSKMFHPNVYANGELCLDILQNRWSPTYDVAAILTSIQ 110          
BLAST of EY744376 vs. ExPASy Swiss-Prot
Match: UBC2_KLULA (Ubiquitin-conjugating enzyme E2 2 OS=Kluyveromyces lactis GN=UBC2 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.138e-15
Identity = 37/104 (35.58%), Postives = 61/104 (58.65%), Query Frame = 3
Query:  195 KQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVR 506
            ++L ++ K + E  P G+      D+     A I GPA TPYE+G FR+ L    ++P+ PP   FL+++FHPN+  NGEIC++ L+  W P+  +  +L  ++
Sbjct:    7 RRLMRDFKRMKEDSPPGVSASPLPDNVMIWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQ 110          
BLAST of EY744376 vs. ExPASy Swiss-Prot
Match: UB2E1_MOUSE (Ubiquitin-conjugating enzyme E2 E1 OS=Mus musculus GN=Ube2e1 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.941e-15
Identity = 42/119 (35.29%), Postives = 65/119 (54.62%), Query Frame = 3
Query:  147 SFVDMATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVV 503
            S V M+ N  L     K++ KEL  +   PP     G   D+     + I GP G+ YE GVF + +  + ++P  PPK  F T+I+H NI + G IC++ LK +W+P+L +  VL+ +
Sbjct:   34 SKVSMSKNSKLLSTSAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSI 152          
BLAST of EY744376 vs. ExPASy Swiss-Prot
Match: UB2E1_HUMAN (Ubiquitin-conjugating enzyme E2 E1 OS=Homo sapiens GN=UBE2E1 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.941e-15
Identity = 42/119 (35.29%), Postives = 65/119 (54.62%), Query Frame = 3
Query:  147 SFVDMATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVV 503
            S V M+ N  L     K++ KEL  +   PP     G   D+     + I GP G+ YE GVF + +  + ++P  PPK  F T+I+H NI + G IC++ LK +W+P+L +  VL+ +
Sbjct:   34 SKVSMSKNSKLLSTSAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSI 152          
BLAST of EY744376 vs. ExPASy Swiss-Prot
Match: UBE2T_MOUSE (Ubiquitin-conjugating enzyme E2 T OS=Mus musculus GN=Ube2t PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.535e-15
Identity = 43/110 (39.09%), Postives = 63/110 (57.27%), Query Frame = 3
Query:  198 QLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKD----WNPSLGLRHVLIVVRVFI 515
            +L KEL  L   PP GI      D  + + A I G A TPYE GVF +++++   +P  PP+  FLT I+HPNI ++G IC++ LK      W PSL +  VL  +++ +
Sbjct:    6 RLKKELHMLAIEPPPGITCWQEKDQVADLRAQILGGANTPYEKGVFTLEVIIPERYPFEPPQVRFLTPIYHPNIDSSGRICLDILKLPPKGAWRPSLNIATVLTSIQLLM 115          
BLAST of EY744376 vs. ExPASy Swiss-Prot
Match: UBE2T_HUMAN (Ubiquitin-conjugating enzyme E2 T OS=Homo sapiens GN=UBE2T PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.535e-15
Identity = 42/110 (38.18%), Postives = 63/110 (57.27%), Query Frame = 3
Query:  198 QLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKD----WNPSLGLRHVLIVVRVFI 515
            +L +EL  L   PP GI    + D    + A I G A TPYE GVF++++++   +P  PP+  FLT I+HPNI + G IC++ LK      W PSL +  VL  +++ +
Sbjct:    6 RLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLM 115          
BLAST of EY744376 vs. ExPASy Swiss-Prot
Match: UBE2N_RAT (Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus GN=Ube2n PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.535e-15
Identity = 37/107 (34.58%), Postives = 64/107 (59.81%), Query Frame = 3
Query:  195 KQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRVFI 515
            +++ KE + L   P  GIK   ++ +       I GP  +P+E G F+++L L  ++P + PK  F+TKI+HPN+   G IC++ LK  W+P+L +R VL+ ++  +
Sbjct:    6 RRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALL 112          
The following BLAST results are available for this feature:
BLAST of EY744376 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 167
Match NameE-valueIdentityDescription
UBC2_YEAST8.713e-1635.58Ubiquitin-conjugating enzyme E2 2 OS=Saccharomyces... [more]
UBC2_ASHGO8.713e-1635.58Ubiquitin-conjugating enzyme E2 2 OS=Ashbya gossyp... [more]
UB2D3_BOVIN8.713e-1638.46Ubiquitin-conjugating enzyme E2 D3 OS=Bos taurus G... [more]
UBC2_USTMA1.138e-1536.54Ubiquitin-conjugating enzyme E2 2 OS=Ustilago mayd... [more]
UBC2_KLULA1.138e-1535.58Ubiquitin-conjugating enzyme E2 2 OS=Kluyveromyces... [more]
UB2E1_MOUSE1.941e-1535.29Ubiquitin-conjugating enzyme E2 E1 OS=Mus musculus... [more]
UB2E1_HUMAN1.941e-1535.29Ubiquitin-conjugating enzyme E2 E1 OS=Homo sapiens... [more]
UBE2T_MOUSE2.535e-1539.09Ubiquitin-conjugating enzyme E2 T OS=Mus musculus ... [more]
UBE2T_HUMAN2.535e-1538.18Ubiquitin-conjugating enzyme E2 T OS=Homo sapiens ... [more]
UBE2N_RAT2.535e-1534.58Ubiquitin-conjugating enzyme E2 N OS=Rattus norveg... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-007-H10-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744376 ID=EY744376; Name=EY744376; organism=Citrus sinensis; type=EST; length=977bp
ATCAGACAAGGTGCTTTCGGCATTCTGCTTACAAATTTTTTATCACTAAG
CCTTTAAGTTCAAAAAGCAACGGAACATTCTTTGCCAAGGTTCTAATTTC
CTGCCAGTGACAGCGCAAAAGAAGAGCTATTACAAGGATCCTGTCATCTT
TTGTTGACATGGCTACTAATGAAAATCTTCCACCAAATGTAATAAAGCAA
CTTGCTAAGGAATTGAAGAGTCTTGATGAATCTCCTCCTGAGGGCATTAA
AGTAGGCGTAAATGATGATGATTTTTCAACCATATTTGCTGATATTGAAG
GCCCAGCTGGAACTCCTTATGAGAATGGTGTTTTCCGCATGAAGTTGTTA
TTATCTCATGACTTCCCGCACTCCCCTCCAAAAGGTTACTTCCTGACGAA
GATATTCCATCCAAATATTGCAACAAATGGTGAAATTTGTGTGAATACAC
TAAAAAAAGATTGGAATCCAAGTCTTGGATTGAGACATGTTCTCATCGTA
GTCCGGGTGTTTATTGATTGAACCATTTCCGGGAATCAGCATTGAATGAA
CAGGCTGGTAAGAACGCTGCCTGAAAATTAACGAAGCAATACCCCAAAAC
TGCCAGGATTTACATTGGGAATTCATGCTAAAGCAAATCCACAAATATCC
GTCACGGACCTATTTTCCAACCTCCCACGGCCGCTGATCGTAGACCCAAA
CATATACCTCATATGGCCCCTAAGAAAGAAACGCCCAATCTGGCGGACCC
ACTCCATCTGCCCCTTCGACGCACCCCACAAACTCCTTCCCCAACCCCCC
CCTCGAAGGGAGAGACAATATCTCGCAAATCGCCCAACCACCTACTTTCC
CCCACCTACAGACACACGGGACCCTCGCCCGCGTATCATACGAACAATAC
CCCCTTAACCCACCACCACCCATCACACCACACAGTACCAGACCCTGACC
CCGTAATGCACCGTACCCCAACTTGCT
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