EY744353

Overview
NameEY744353
Unique NameEY744353
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1027
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744353 vs. ExPASy Swiss-Prot
Match: BOP1_DROMO (Ribosome biogenesis protein BOP1 homolog OS=Drosophila mojavensis GN=GI19116 PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 3.542e-23
Identity = 62/167 (37.13%), Postives = 100/167 (59.88%), Query Frame = 1
Query:   25 LTSGRCLRVLEIGEAIQYVAWNPLPELPVLAVSVGQDVLILNTGLGNEEEQRRVKDLLHVETPTAP---DDNMASIVSWLQ---HDKLDGIR--LRHFKMVSSVEWHRRGDYLSTVMPAGESRAIFMHQLSKKLSHRIPF-KLHGLPVSSVFHPTRSIFFVSTKKEI 498
            + +GRC+R +E  + ++ VAW P  +L ++AV+ G  +L++N  +G++   ++  DLL  E+P       + + + V W      ++  G+R  + HFK +  V WH RGDYL+TVMP G +R+  +HQLSK+ S +IPF K  GL    +FHP +  FFV+T+  I
Sbjct:  484 IATGRCIRTIETNDVVRCVAWCPNAKLSIIAVATGSRLLLINPKVGDKLLIKKTDDLL-AESPNLDIIESERIKTAVQWSNAEPDEQEKGVRVVITHFKPIRQVTWHGRGDYLATVMPEGANRSALIHQLSKRRS-QIPFSKSKGLIQCVLFHPVKPCFFVATQHNI 648          
BLAST of EY744353 vs. ExPASy Swiss-Prot
Match: BOP1_AEDAE (Ribosome biogenesis protein BOP1 homolog OS=Aedes aegypti GN=AAEL001169 PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.031e-22
Identity = 57/167 (34.13%), Postives = 101/167 (60.48%), Query Frame = 1
Query:   25 LTSGRCLRVLEIGEAIQYVAWNPLPELPVLAVSVGQDVLILNTGLGNEEEQRRVKDLLHVETP---TAPDDNMASIVSWL---QHDKLDGIRL--RHFKMVSSVEWHRRGDYLSTVMPAGESRAIFMHQLSKKLSHRIPF-KLHGLPVSSVFHPTRSIFFVSTKKEI 498
            +++ RC+R +  G+ ++ VAW P  ++ ++AV+ G+ VL++N  +G+    ++  DLL  E P   T  ++ + + V W+   + ++  G+R+   HFK +  V WH RGDY +TVMP   +R++ +HQLSK+ S + PF K  GL    +FHP +   FV+T++ +
Sbjct:  558 VSTARCIRTIPTGDVVRSVAWCPNSKISLIAVASGKRVLLINPQVGDSLLVKKTDDLL-AEAPKSETVDNERITTAVQWVDFTEEERKSGVRIVINHFKEIKQVTWHGRGDYFATVMPEAANRSVLIHQLSKRRS-QFPFSKSKGLIQCVLFHPVKPCLFVATQRHV 722          
BLAST of EY744353 vs. ExPASy Swiss-Prot
Match: BOP1_ANOGA (Ribosome biogenesis protein BOP1 homolog OS=Anopheles gambiae GN=AGAP007128 PE=3 SV=4)

HSP 1 Score: 105.145 bits (261), Expect = 6.680e-22
Identity = 60/167 (35.93%), Postives = 99/167 (59.28%), Query Frame = 1
Query:   25 LTSGRCLRVLEIGEAIQYVAWNPLPELPVLAVSVGQDVLILNTGLGNEEEQRRVKDLLHVETP---TAPDDNMASIVSW---LQHDKLDGIRL--RHFKMVSSVEWHRRGDYLSTVMPAGESRAIFMHQLSKKLSHRIPF-KLHGLPVSSVFHPTRSIFFVSTKKEI 498
            +++ RC+R +  G+ ++ VAW P  ++ ++A + G+ VL++N  +G+    ++  DLL  E P   T   + + S V W    + +K  G+R+   HF+ V  V WH RGDY +TVMP G  R++ +HQLSK+ S ++PF K  GL    +FHP +   FV+T++ I
Sbjct:  557 ISTARCIRTIPTGDIVRSVAWCPNSKISLVAAASGKRVLLINPKVGDYMLVKKTDDLL-TEAPRSDTVDSERIRSAVQWGEVTEEEKKLGVRIVITHFREVRQVTWHGRGDYFATVMPDGAYRSVMIHQLSKRRS-QVPFSKSKGLIQCVLFHPIKPCLFVATQRHI 721          
BLAST of EY744353 vs. ExPASy Swiss-Prot
Match: BOP1_CULQU (Ribosome biogenesis protein BOP1 homolog OS=Culex quinquefasciatus GN=CPIJ004506 PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 7.386e-21
Identity = 54/167 (32.34%), Postives = 101/167 (60.48%), Query Frame = 1
Query:   25 LTSGRCLRVLEIGEAIQYVAWNPLPELPVLAVSVGQDVLILNTGLGNEEEQRRVKDLLHVETP---TAPDDNMASIVSWL---QHDKLDGIRL--RHFKMVSSVEWHRRGDYLSTVMPAGESRAIFMHQLSKKLSHRIPF-KLHGLPVSSVFHPTRSIFFVSTKKEI 498
            +++ RC++ +  G+ ++ VAW P  ++ ++AV+ G+  L++N  +G+    ++  DLL  E P      ++ +++ V W+   + ++  G+R+   HF+ +  V WH RGDY +TVMP  ++R++ +HQLSK+ S + PF K  GL    +FHP +   FV+T++ I
Sbjct:  553 VSTARCIKTIPTGDVVRSVAWCPNVKISLIAVASGKRTLLINPHVGDCLLSKKTDDLL-AEAPKHEVVDNERISTAVQWVDVAEEEQKAGVRIVINHFREIKQVTWHGRGDYFATVMPEAQNRSVLIHQLSKRRS-QFPFSKSKGLIQCVLFHPVKPCLFVATQRHI 717          
BLAST of EY744353 vs. ExPASy Swiss-Prot
Match: BOP1_DANRE (Ribosome biogenesis protein bop1 OS=Danio rerio GN=bop1 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.819e-19
Identity = 56/167 (33.53%), Postives = 91/167 (54.49%), Query Frame = 1
Query:   16 FGRLTSGRCLRVLEIGEAIQYVAWNPLPELPVLAVSVGQDVLILNTGLGNEEEQRRVKDLLHVETPTAPDDNMASIVSWL-----QHDKLDGIRLRHFKMVSSVEWHRRGDYLSTVMP-AGESRAIFMHQLSKKLSHRIPFKLHGLPVSSVFHPTRSIFFVSTKKEI 498
            F  +++ RCL+ +++G A++ VAWNP P + ++AVS    VL+LN  LG+         L  + +   P++     V WL      H++   + L+H K V  V WH +GDYL+ V+P +  S  + +HQ+SK+ +     K  GL     FHP R  FFV+T++ +
Sbjct:  469 FWEVSTARCLKTVQVGGAVKGVAWNPNPSICLVAVSYEDSVLLLNPALGDRLLCTATDQL--ISSYAEPEEVKEQPVQWLVSEGEGHEQGHRLVLKHPKAVRQVTWHAKGDYLACVLPDSSSSVQVLIHQVSKRRTQNPFRKSKGLVQCVSFHPVRPYFFVATQRYV 633          
BLAST of EY744353 vs. ExPASy Swiss-Prot
Match: BOP1_RAT (Ribosome biogenesis protein BOP1 OS=Rattus norvegicus GN=Bop1 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 9.029e-19
Identity = 53/163 (32.52%), Postives = 88/163 (53.99%), Query Frame = 1
Query:   25 LTSGRCLRVLEIGEAIQYVAWNPLPELPVLAVSVGQDVLILNTGLGNEEEQRRVKDLLHVETPTAPDDNMASIVSWLQ---HDKLDGIRLR--HFKMVSSVEWHRRGDYLSTVMPAGESRAIFMHQLSKKLSHRIPFKLHGLPVSSVFHPTRSIFFVSTKKEI 498
            + + RC++ + +G  I+ +AWNP P + ++A ++   V++LN  LG+         LL  ET T P++       WL+    ++  G+RLR  H K V+ V WH RGDYL+ V+ +     + +HQLS++ S     + HG      FHPTR    V++++ I
Sbjct:  427 VATARCMKTVRVGGVIRSIAWNPNPTICLVAAAMDDAVVLLNPALGDRLLVGSTDQLL--ETFTPPEEPTLQPAHWLEVSEEERQRGLRLRICHSKPVTQVTWHGRGDYLAVVLSSQGHTQVLIHQLSRRRSQSPFRRSHGQVQCVAFHPTRPFLLVASQRSI 587          
BLAST of EY744353 vs. ExPASy Swiss-Prot
Match: BOP1_MOUSE (Ribosome biogenesis protein BOP1 OS=Mus musculus GN=Bop1 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.179e-18
Identity = 51/163 (31.29%), Postives = 88/163 (53.99%), Query Frame = 1
Query:   25 LTSGRCLRVLEIGEAIQYVAWNPLPELPVLAVSVGQDVLILNTGLGNEEEQRRVKDLLHVETPTAPDDNMASIVSWLQHDKLD---GIRLR--HFKMVSSVEWHRRGDYLSTVMPAGESRAIFMHQLSKKLSHRIPFKLHGLPVSSVFHPTRSIFFVSTKKEI 498
            + + RC++ + +G  ++ +AWNP P + ++A ++   VL+LN  LG+         LL   TP  P++       WL+  + +   G+RLR  H K V+ V WH RGDYL+ V+ + E   + +HQ+S++ S     + HG      FHP+R    V++++ I
Sbjct:  428 VATARCMKTVHVGGVVRSIAWNPNPTICLVAAAMDDAVLLLNPALGDRLLVGSTDQLLEAFTP--PEEPALQPARWLEVSEEEHQRGLRLRICHSKPVTQVTWHGRGDYLAVVLSSQEHTQVLLHQVSRRRSQSPFRRSHGQVQCVAFHPSRPFLLVASQRSI 588          
BLAST of EY744353 vs. ExPASy Swiss-Prot
Match: BOP1_XENTR (Ribosome biogenesis protein bop1 OS=Xenopus tropicalis GN=bop1 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.627e-18
Identity = 55/165 (33.33%), Postives = 91/165 (55.15%), Query Frame = 1
Query:   16 FGRLTSGRCLRVLEIGEAIQYVAWNPLPELPVLAVSVGQDVLILNTGLGNEEEQRRVKDLLHVETPTAPDDNMASIVSWLQHDKLD---GIRL--RHFKMVSSVEWHRRGDYLSTVMPAGESRAIFMHQLSKKLSHRIPFKLHGLPVSSV-FHPTRSIFFVSTKK 492
            F  + +GRC++ + +  A++ ++WNP P L ++A  V   V+++N GLG+           H+     P++     VSW + +  +   G+RL  +H K V  V WH RGDY + V+P   +  + +HQLS++ S   PF+ +   V  V FHPTR  FFV+T++
Sbjct:  422 FWEVGTGRCMKSVLLEGAVKSISWNPNPGLVLVAACVEHSVVLINPGLGDRLLCGATDQ--HIGGYQPPEEEGQQPVSWGEAEGTEYSNGLRLCIKHQKAVKQVTWHARGDYFAVVLPDNGNSQVLIHQLSRRRSQN-PFRKNKGQVQKVLFHPTRPFFFVATQR 583          
BLAST of EY744353 vs. ExPASy Swiss-Prot
Match: BOP1B_XENLA (Ribosome biogenesis protein bop1-B OS=Xenopus laevis GN=bop1-B PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.627e-18
Identity = 53/167 (31.74%), Postives = 95/167 (56.89%), Query Frame = 1
Query:   16 FGRLTSGRCLRVLEIGEAIQYVAWNPLPELPVLAVSVGQDVLILNTGLGNEEEQRRVKDLLHVETPTAPDDNMASIVSWLQHDKLD---GIRL--RHFKMVSSVEWHRRGDYLSTVMPAGESRAIFMHQLSKKLSHRIPFKLHGLPVSSV-FHPTRSIFFVSTKKEI 498
            F  +++GRC++ + +  A++ ++WNP P L ++A  V + V+++N GLG+           H+     P++ +   V+W + +  +   G+RL  +H K V  V +H RGDY + V+P   +  + +HQLS++ S   PF+ +   V  V FHPTR  FFV+T++ +
Sbjct:  421 FWEVSTGRCMKSVVLEGAVKSISWNPNPVLVLVAACVDRSVVLINPGLGDRLLCSATDQ--HISGYQPPEEEVQQPVTWEEAEGSEYSSGLRLWIKHQKEVKQVTFHARGDYFAVVLPDNGNSQVLIHQLSRRRSQN-PFRKNKGQVQKVLFHPTRPFFFVATQRYV 584          
BLAST of EY744353 vs. ExPASy Swiss-Prot
Match: BOP1A_XENLA (Ribosome biogenesis protein bop1-A OS=Xenopus laevis GN=bop1-A PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 3.431e-18
Identity = 53/167 (31.74%), Postives = 95/167 (56.89%), Query Frame = 1
Query:   16 FGRLTSGRCLRVLEIGEAIQYVAWNPLPELPVLAVSVGQDVLILNTGLGNEEEQRRVKDLLHVETPTAPDDNMASIVSWLQHDKL---DGIRL--RHFKMVSSVEWHRRGDYLSTVMPAGESRAIFMHQLSKKLSHRIPFKLHGLPVSSV-FHPTRSIFFVSTKKEI 498
            F  +++GRC++ + +  A++ ++WNP P L ++A  V + V+++N GLG+           H+     P++ +   V+W + +     +G+RL  +H K V  V +H RGDY + V+P   +  + +HQLS++ S   PF+ +   V  V FHPTR  FFV+T++ +
Sbjct:  421 FWEVSTGRCMKSVVLEGAVKSISWNPNPGLVLVAACVDRSVVLINPGLGDRLLCSATDQ--HISGYQPPEEEVQQPVTWEEVEGAQYSNGLRLCIKHQKEVKQVTFHARGDYFAVVLPDNGNSQVLIHQLSRRRSQN-PFRKNKGQVQKVLFHPTRPFFFVATQRYV 584          
The following BLAST results are available for this feature:
BLAST of EY744353 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
BOP1_DROMO3.542e-2337.13Ribosome biogenesis protein BOP1 homolog OS=Drosop... [more]
BOP1_AEDAE1.031e-2234.13Ribosome biogenesis protein BOP1 homolog OS=Aedes ... [more]
BOP1_ANOGA6.680e-2235.93Ribosome biogenesis protein BOP1 homolog OS=Anophe... [more]
BOP1_CULQU7.386e-2132.34Ribosome biogenesis protein BOP1 homolog OS=Culex ... [more]
BOP1_DANRE1.819e-1933.53Ribosome biogenesis protein bop1 OS=Danio rerio GN... [more]
BOP1_RAT9.029e-1932.52Ribosome biogenesis protein BOP1 OS=Rattus norvegi... [more]
BOP1_MOUSE1.179e-1831.29Ribosome biogenesis protein BOP1 OS=Mus musculus G... [more]
BOP1_XENTR2.627e-1833.33Ribosome biogenesis protein bop1 OS=Xenopus tropic... [more]
BOP1B_XENLA2.627e-1831.74Ribosome biogenesis protein bop1-B OS=Xenopus laev... [more]
BOP1A_XENLA3.431e-1831.74Ribosome biogenesis protein bop1-A OS=Xenopus laev... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-007-F10-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744353 ID=EY744353; Name=EY744353; organism=Citrus sinensis; type=EST; length=1027bp
CCACGCGTCCGCGCATTTGGGAGGTTGACCTCTGGTCGATGTCTTAGGGT
GTTGGAGATCGGTGAAGCTATCCAATATGTAGCTTGGAATCCTTTGCCTG
AGCTTCCTGTTCTGGCTGTTTCTGTGGGACAAGATGTTCTTATTTTGAAC
ACTGGATTGGGGAACGAAGAAGAGCAAAGAAGAGTTAAGGACCTTTTGCA
TGTTGAGACTCCAACAGCACCAGATGACAACATGGCATCCATTGTGAGTT
GGCTTCAACACGACAAGCTTGATGGGATTAGATTGAGACATTTTAAGATG
GTGTCTTCGGTAGAATGGCATCGCAGGGGAGACTACCTCTCCACGGTAAT
GCCAGCTGGTGAATCAAGGGCAATTTTTATGCACCAGCTTTCTAAGAAGC
TTTCCCATAGAATCCCATTCAAGTTGCATGGACTTCCTGTATCGTCAGTA
TTTCATCCTACTCGTTCCATATTCTTTGTTTCAACAAAGAAAGAAATAAT
TTCGTGTTTATGAATCTGTTGAAGCAAAGGCTCATAACAAAGCTAGAAGA
CTGGACTAAAGGGAAGTCTCCCCAATTGCAATTCATCCTTGCTGGTGAAA
ATTCTATTTGGTTGGGGAACCAGAAGAAAGGAAATTGGGGTTGCCTTCAA
ACTGGACCCTTTCCCTCCTCACCCCTACACGGGTCCCCAACGGCTCACCC
CAAACCCCCTTACCCCCGGGGGCCCTTCCCCCCGCCCTACCCCCCCCCTA
TCTTCCGCCTGCACCTACACGCTTGAACCCCGACCGCATTTCGCCTGGCC
CCGGCCCTCTTATACCCTTTAGACCCCAAACCCCCTTCTCATATTCCCCC
CAGCGAAAACTGTCCCCGGGCCCCCGAACTCACCTCCCCGGCTGCGTACC
AGCTCTGACACCAATGTAGCATTCACTTCTCCAAACCCAAACAGCGCCAG
CCTGAGATATACTAGTAATGTAATCGCGGGCGCTGAGCTAAAATTAAGCG
AATGTAAAGCACCTCACTGAGTCTTTT
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