EY744353
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744353 vs. ExPASy Swiss-Prot
Match: BOP1_DROMO (Ribosome biogenesis protein BOP1 homolog OS=Drosophila mojavensis GN=GI19116 PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 3.542e-23 Identity = 62/167 (37.13%), Postives = 100/167 (59.88%), Query Frame = 1 Query: 25 LTSGRCLRVLEIGEAIQYVAWNPLPELPVLAVSVGQDVLILNTGLGNEEEQRRVKDLLHVETPTAP---DDNMASIVSWLQ---HDKLDGIR--LRHFKMVSSVEWHRRGDYLSTVMPAGESRAIFMHQLSKKLSHRIPF-KLHGLPVSSVFHPTRSIFFVSTKKEI 498 + +GRC+R +E + ++ VAW P +L ++AV+ G +L++N +G++ ++ DLL E+P + + + V W ++ G+R + HFK + V WH RGDYL+TVMP G +R+ +HQLSK+ S +IPF K GL +FHP + FFV+T+ I Sbjct: 484 IATGRCIRTIETNDVVRCVAWCPNAKLSIIAVATGSRLLLINPKVGDKLLIKKTDDLL-AESPNLDIIESERIKTAVQWSNAEPDEQEKGVRVVITHFKPIRQVTWHGRGDYLATVMPEGANRSALIHQLSKRRS-QIPFSKSKGLIQCVLFHPVKPCFFVATQHNI 648
BLAST of EY744353 vs. ExPASy Swiss-Prot
Match: BOP1_AEDAE (Ribosome biogenesis protein BOP1 homolog OS=Aedes aegypti GN=AAEL001169 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.031e-22 Identity = 57/167 (34.13%), Postives = 101/167 (60.48%), Query Frame = 1 Query: 25 LTSGRCLRVLEIGEAIQYVAWNPLPELPVLAVSVGQDVLILNTGLGNEEEQRRVKDLLHVETP---TAPDDNMASIVSWL---QHDKLDGIRL--RHFKMVSSVEWHRRGDYLSTVMPAGESRAIFMHQLSKKLSHRIPF-KLHGLPVSSVFHPTRSIFFVSTKKEI 498 +++ RC+R + G+ ++ VAW P ++ ++AV+ G+ VL++N +G+ ++ DLL E P T ++ + + V W+ + ++ G+R+ HFK + V WH RGDY +TVMP +R++ +HQLSK+ S + PF K GL +FHP + FV+T++ + Sbjct: 558 VSTARCIRTIPTGDVVRSVAWCPNSKISLIAVASGKRVLLINPQVGDSLLVKKTDDLL-AEAPKSETVDNERITTAVQWVDFTEEERKSGVRIVINHFKEIKQVTWHGRGDYFATVMPEAANRSVLIHQLSKRRS-QFPFSKSKGLIQCVLFHPVKPCLFVATQRHV 722
BLAST of EY744353 vs. ExPASy Swiss-Prot
Match: BOP1_ANOGA (Ribosome biogenesis protein BOP1 homolog OS=Anopheles gambiae GN=AGAP007128 PE=3 SV=4) HSP 1 Score: 105.145 bits (261), Expect = 6.680e-22 Identity = 60/167 (35.93%), Postives = 99/167 (59.28%), Query Frame = 1 Query: 25 LTSGRCLRVLEIGEAIQYVAWNPLPELPVLAVSVGQDVLILNTGLGNEEEQRRVKDLLHVETP---TAPDDNMASIVSW---LQHDKLDGIRL--RHFKMVSSVEWHRRGDYLSTVMPAGESRAIFMHQLSKKLSHRIPF-KLHGLPVSSVFHPTRSIFFVSTKKEI 498 +++ RC+R + G+ ++ VAW P ++ ++A + G+ VL++N +G+ ++ DLL E P T + + S V W + +K G+R+ HF+ V V WH RGDY +TVMP G R++ +HQLSK+ S ++PF K GL +FHP + FV+T++ I Sbjct: 557 ISTARCIRTIPTGDIVRSVAWCPNSKISLVAAASGKRVLLINPKVGDYMLVKKTDDLL-TEAPRSDTVDSERIRSAVQWGEVTEEEKKLGVRIVITHFREVRQVTWHGRGDYFATVMPDGAYRSVMIHQLSKRRS-QVPFSKSKGLIQCVLFHPIKPCLFVATQRHI 721
BLAST of EY744353 vs. ExPASy Swiss-Prot
Match: BOP1_CULQU (Ribosome biogenesis protein BOP1 homolog OS=Culex quinquefasciatus GN=CPIJ004506 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 7.386e-21 Identity = 54/167 (32.34%), Postives = 101/167 (60.48%), Query Frame = 1 Query: 25 LTSGRCLRVLEIGEAIQYVAWNPLPELPVLAVSVGQDVLILNTGLGNEEEQRRVKDLLHVETP---TAPDDNMASIVSWL---QHDKLDGIRL--RHFKMVSSVEWHRRGDYLSTVMPAGESRAIFMHQLSKKLSHRIPF-KLHGLPVSSVFHPTRSIFFVSTKKEI 498 +++ RC++ + G+ ++ VAW P ++ ++AV+ G+ L++N +G+ ++ DLL E P ++ +++ V W+ + ++ G+R+ HF+ + V WH RGDY +TVMP ++R++ +HQLSK+ S + PF K GL +FHP + FV+T++ I Sbjct: 553 VSTARCIKTIPTGDVVRSVAWCPNVKISLIAVASGKRTLLINPHVGDCLLSKKTDDLL-AEAPKHEVVDNERISTAVQWVDVAEEEQKAGVRIVINHFREIKQVTWHGRGDYFATVMPEAQNRSVLIHQLSKRRS-QFPFSKSKGLIQCVLFHPVKPCLFVATQRHI 717
BLAST of EY744353 vs. ExPASy Swiss-Prot
Match: BOP1_DANRE (Ribosome biogenesis protein bop1 OS=Danio rerio GN=bop1 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.819e-19 Identity = 56/167 (33.53%), Postives = 91/167 (54.49%), Query Frame = 1 Query: 16 FGRLTSGRCLRVLEIGEAIQYVAWNPLPELPVLAVSVGQDVLILNTGLGNEEEQRRVKDLLHVETPTAPDDNMASIVSWL-----QHDKLDGIRLRHFKMVSSVEWHRRGDYLSTVMP-AGESRAIFMHQLSKKLSHRIPFKLHGLPVSSVFHPTRSIFFVSTKKEI 498 F +++ RCL+ +++G A++ VAWNP P + ++AVS VL+LN LG+ L + + P++ V WL H++ + L+H K V V WH +GDYL+ V+P + S + +HQ+SK+ + K GL FHP R FFV+T++ + Sbjct: 469 FWEVSTARCLKTVQVGGAVKGVAWNPNPSICLVAVSYEDSVLLLNPALGDRLLCTATDQL--ISSYAEPEEVKEQPVQWLVSEGEGHEQGHRLVLKHPKAVRQVTWHAKGDYLACVLPDSSSSVQVLIHQVSKRRTQNPFRKSKGLVQCVSFHPVRPYFFVATQRYV 633
BLAST of EY744353 vs. ExPASy Swiss-Prot
Match: BOP1_RAT (Ribosome biogenesis protein BOP1 OS=Rattus norvegicus GN=Bop1 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 9.029e-19 Identity = 53/163 (32.52%), Postives = 88/163 (53.99%), Query Frame = 1 Query: 25 LTSGRCLRVLEIGEAIQYVAWNPLPELPVLAVSVGQDVLILNTGLGNEEEQRRVKDLLHVETPTAPDDNMASIVSWLQ---HDKLDGIRLR--HFKMVSSVEWHRRGDYLSTVMPAGESRAIFMHQLSKKLSHRIPFKLHGLPVSSVFHPTRSIFFVSTKKEI 498 + + RC++ + +G I+ +AWNP P + ++A ++ V++LN LG+ LL ET T P++ WL+ ++ G+RLR H K V+ V WH RGDYL+ V+ + + +HQLS++ S + HG FHPTR V++++ I Sbjct: 427 VATARCMKTVRVGGVIRSIAWNPNPTICLVAAAMDDAVVLLNPALGDRLLVGSTDQLL--ETFTPPEEPTLQPAHWLEVSEEERQRGLRLRICHSKPVTQVTWHGRGDYLAVVLSSQGHTQVLIHQLSRRRSQSPFRRSHGQVQCVAFHPTRPFLLVASQRSI 587
BLAST of EY744353 vs. ExPASy Swiss-Prot
Match: BOP1_MOUSE (Ribosome biogenesis protein BOP1 OS=Mus musculus GN=Bop1 PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.179e-18 Identity = 51/163 (31.29%), Postives = 88/163 (53.99%), Query Frame = 1 Query: 25 LTSGRCLRVLEIGEAIQYVAWNPLPELPVLAVSVGQDVLILNTGLGNEEEQRRVKDLLHVETPTAPDDNMASIVSWLQHDKLD---GIRLR--HFKMVSSVEWHRRGDYLSTVMPAGESRAIFMHQLSKKLSHRIPFKLHGLPVSSVFHPTRSIFFVSTKKEI 498 + + RC++ + +G ++ +AWNP P + ++A ++ VL+LN LG+ LL TP P++ WL+ + + G+RLR H K V+ V WH RGDYL+ V+ + E + +HQ+S++ S + HG FHP+R V++++ I Sbjct: 428 VATARCMKTVHVGGVVRSIAWNPNPTICLVAAAMDDAVLLLNPALGDRLLVGSTDQLLEAFTP--PEEPALQPARWLEVSEEEHQRGLRLRICHSKPVTQVTWHGRGDYLAVVLSSQEHTQVLLHQVSRRRSQSPFRRSHGQVQCVAFHPSRPFLLVASQRSI 588
BLAST of EY744353 vs. ExPASy Swiss-Prot
Match: BOP1_XENTR (Ribosome biogenesis protein bop1 OS=Xenopus tropicalis GN=bop1 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.627e-18 Identity = 55/165 (33.33%), Postives = 91/165 (55.15%), Query Frame = 1 Query: 16 FGRLTSGRCLRVLEIGEAIQYVAWNPLPELPVLAVSVGQDVLILNTGLGNEEEQRRVKDLLHVETPTAPDDNMASIVSWLQHDKLD---GIRL--RHFKMVSSVEWHRRGDYLSTVMPAGESRAIFMHQLSKKLSHRIPFKLHGLPVSSV-FHPTRSIFFVSTKK 492 F + +GRC++ + + A++ ++WNP P L ++A V V+++N GLG+ H+ P++ VSW + + + G+RL +H K V V WH RGDY + V+P + + +HQLS++ S PF+ + V V FHPTR FFV+T++ Sbjct: 422 FWEVGTGRCMKSVLLEGAVKSISWNPNPGLVLVAACVEHSVVLINPGLGDRLLCGATDQ--HIGGYQPPEEEGQQPVSWGEAEGTEYSNGLRLCIKHQKAVKQVTWHARGDYFAVVLPDNGNSQVLIHQLSRRRSQN-PFRKNKGQVQKVLFHPTRPFFFVATQR 583
BLAST of EY744353 vs. ExPASy Swiss-Prot
Match: BOP1B_XENLA (Ribosome biogenesis protein bop1-B OS=Xenopus laevis GN=bop1-B PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.627e-18 Identity = 53/167 (31.74%), Postives = 95/167 (56.89%), Query Frame = 1 Query: 16 FGRLTSGRCLRVLEIGEAIQYVAWNPLPELPVLAVSVGQDVLILNTGLGNEEEQRRVKDLLHVETPTAPDDNMASIVSWLQHDKLD---GIRL--RHFKMVSSVEWHRRGDYLSTVMPAGESRAIFMHQLSKKLSHRIPFKLHGLPVSSV-FHPTRSIFFVSTKKEI 498 F +++GRC++ + + A++ ++WNP P L ++A V + V+++N GLG+ H+ P++ + V+W + + + G+RL +H K V V +H RGDY + V+P + + +HQLS++ S PF+ + V V FHPTR FFV+T++ + Sbjct: 421 FWEVSTGRCMKSVVLEGAVKSISWNPNPVLVLVAACVDRSVVLINPGLGDRLLCSATDQ--HISGYQPPEEEVQQPVTWEEAEGSEYSSGLRLWIKHQKEVKQVTFHARGDYFAVVLPDNGNSQVLIHQLSRRRSQN-PFRKNKGQVQKVLFHPTRPFFFVATQRYV 584
BLAST of EY744353 vs. ExPASy Swiss-Prot
Match: BOP1A_XENLA (Ribosome biogenesis protein bop1-A OS=Xenopus laevis GN=bop1-A PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 3.431e-18 Identity = 53/167 (31.74%), Postives = 95/167 (56.89%), Query Frame = 1 Query: 16 FGRLTSGRCLRVLEIGEAIQYVAWNPLPELPVLAVSVGQDVLILNTGLGNEEEQRRVKDLLHVETPTAPDDNMASIVSWLQHDKL---DGIRL--RHFKMVSSVEWHRRGDYLSTVMPAGESRAIFMHQLSKKLSHRIPFKLHGLPVSSV-FHPTRSIFFVSTKKEI 498 F +++GRC++ + + A++ ++WNP P L ++A V + V+++N GLG+ H+ P++ + V+W + + +G+RL +H K V V +H RGDY + V+P + + +HQLS++ S PF+ + V V FHPTR FFV+T++ + Sbjct: 421 FWEVSTGRCMKSVVLEGAVKSISWNPNPGLVLVAACVDRSVVLINPGLGDRLLCSATDQ--HISGYQPPEEEVQQPVTWEEVEGAQYSNGLRLCIKHQKEVKQVTFHARGDYFAVVLPDNGNSQVLIHQLSRRRSQN-PFRKNKGQVQKVLFHPTRPFFFVATQRYV 584 The following BLAST results are available for this feature:
BLAST of EY744353 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >EY744353 ID=EY744353; Name=EY744353; organism=Citrus sinensis; type=EST; length=1027bpback to top |