EY744350

Overview
NameEY744350
Unique NameEY744350
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1043
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY744350 vs. ExPASy Swiss-Prot
Match: ACTA_STRPU (Actin, cytoskeletal 1A OS=Strongylocentrotus purpuratus GN=CYIA PE=3 SV=1)

HSP 1 Score: 303.908 bits (777), Expect = 1.002e-81
Identity = 146/162 (90.12%), Postives = 153/162 (94.44%), Query Frame = 1 
Query:  106 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPXTXVAIQAVLSLYASGRTTGIVLDSGDGVSHTDP 591
            +D+  LV DNG+GMVKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYP+EHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+P   VAIQAVLSLYASGRTTGIV DSGDGVSHT P
Sbjct:    4 DDVAALVIDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPMEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVP 165
[Close]
BLAST of EY744350 vs. ExPASy Swiss-Prot
Match: ACT5_DROME (Actin-87E OS=Drosophila melanogaster GN=Act87E PE=1 SV=1)

HSP 1 Score: 303.908 bits (777), Expect = 1.002e-81
Identity = 146/162 (90.12%), Postives = 153/162 (94.44%), Query Frame = 1 
Query:  106 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPXTXVAIQAVLSLYASGRTTGIVLDSGDGVSHTDP 591
            +++  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAP   VAIQAVLSLYASGRTTGIVLDSGDGVSHT P
Sbjct:    4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVP 165
[Close]
BLAST of EY744350 vs. ExPASy Swiss-Prot
Match: ACT5C_ANOGA (Actin-5C OS=Anopheles gambiae GN=Act5C PE=2 SV=1)

HSP 1 Score: 303.908 bits (777), Expect = 1.002e-81
Identity = 147/162 (90.74%), Postives = 152/162 (93.83%), Query Frame = 1 
Query:  106 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPXTXVAIQAVLSLYASGRTTGIVLDSGDGVSHTDP 591
            E++  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN P   VAIQAVLSLYASGRTTGIVLDSGDGVSHT P
Sbjct:    4 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVP 165
[Close]
BLAST of EY744350 vs. ExPASy Swiss-Prot
Match: ACT4_BOMMO (Actin, cytoplasmic A4 OS=Bombyx mori GN=A4 PE=2 SV=1)

HSP 1 Score: 303.908 bits (777), Expect = 1.002e-81
Identity = 147/162 (90.74%), Postives = 152/162 (93.83%), Query Frame = 1 
Query:  106 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPXTXVAIQAVLSLYASGRTTGIVLDSGDGVSHTDP 591
            E++  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN P   VAIQAVLSLYASGRTTGIVLDSGDGVSHT P
Sbjct:    4 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVP 165
[Close]
BLAST of EY744350 vs. ExPASy Swiss-Prot
Match: ACT3_BOMMO (Actin, cytoplasmic A3 OS=Bombyx mori PE=3 SV=3)

HSP 1 Score: 303.908 bits (777), Expect = 1.002e-81
Identity = 147/162 (90.74%), Postives = 152/162 (93.83%), Query Frame = 1 
Query:  106 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPXTXVAIQAVLSLYASGRTTGIVLDSGDGVSHTDP 591
            E++  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN P   VAIQAVLSLYASGRTTGIVLDSGDGVSHT P
Sbjct:    4 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVP 165
[Close]
BLAST of EY744350 vs. ExPASy Swiss-Prot
Match: ACT3B_HELAM (Actin-A3b, cytoplasmic OS=Helicoverpa armigera GN=actA3b PE=2 SV=1)

HSP 1 Score: 303.908 bits (777), Expect = 1.002e-81
Identity = 147/162 (90.74%), Postives = 152/162 (93.83%), Query Frame = 1 
Query:  106 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPXTXVAIQAVLSLYASGRTTGIVLDSGDGVSHTDP 591
            E++  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN P   VAIQAVLSLYASGRTTGIVLDSGDGVSHT P
Sbjct:    4 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVP 165
[Close]
BLAST of EY744350 vs. ExPASy Swiss-Prot
Match: ACT3A_HELAM (Actin, cytoplasmic A3a OS=Helicoverpa armigera GN=actA3a PE=2 SV=1)

HSP 1 Score: 303.908 bits (777), Expect = 1.002e-81
Identity = 147/162 (90.74%), Postives = 152/162 (93.83%), Query Frame = 1 
Query:  106 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPXTXVAIQAVLSLYASGRTTGIVLDSGDGVSHTDP 591
            E++  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN P   VAIQAVLSLYASGRTTGIVLDSGDGVSHT P
Sbjct:    4 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVP 165
[Close]
BLAST of EY744350 vs. ExPASy Swiss-Prot
Match: ACT2_HALRO (Actin, muscle 2/4/4A OS=Halocynthia roretzi GN=MA2 PE=2 SV=1)

HSP 1 Score: 303.908 bits (777), Expect = 1.002e-81
Identity = 146/167 (87.43%), Postives = 155/167 (92.81%), Query Frame = 1 
Query:   94 MADGE-DIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPXTXVAIQAVLSLYASGRTTGIVLDSGDGVSHTDP 591
            M+DGE D   +VCDNG+G+VK+GFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQIMFETFN P   VAIQAVLSLYASGRTTGIVLD+GDGVSH  P
Sbjct:    1 MSDGEEDTTAIVCDNGSGLVKSGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDAGDGVSHNVP 167
[Close]
BLAST of EY744350 vs. ExPASy Swiss-Prot
Match: ACT2_DROME (Actin-42A OS=Drosophila melanogaster GN=Act42A PE=1 SV=3)

HSP 1 Score: 303.908 bits (777), Expect = 1.002e-81
Identity = 147/162 (90.74%), Postives = 152/162 (93.83%), Query Frame = 1 
Query:  106 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPXTXVAIQAVLSLYASGRTTGIVLDSGDGVSHTDP 591
            E++  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN P   VAIQAVLSLYASGRTTGIVLDSGDGVSHT P
Sbjct:    4 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVP 165
[Close]
BLAST of EY744350 vs. ExPASy Swiss-Prot
Match: ACT1_SCHCO (Actin-1 OS=Schizophyllum commune GN=ACT1 PE=2 SV=1)

HSP 1 Score: 303.908 bits (777), Expect = 1.002e-81
Identity = 156/189 (82.54%), Postives = 164/189 (86.77%), Query Frame = 1 
Query:  106 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPXTXVAIQAVLSLYASGRTTGIVLDSGDGVSHTDPKL*RVCPSPLAILPPDLGWAGTSLDKF 672
            +++  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAP   VAIQAVLSLYASGRTTGIVLDSGDGV+HT P +      P AIL  DL  AG  L  F
Sbjct:    3 DEVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAFYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVP-IYEGFALPHAILRLDL--AGRDLTDF 188
The following BLAST results are available for this feature:
BLAST of EY744350 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 455
Match NameE-valueIdentityDescription
ACTA_STRPU1.002e-8190.12Actin, cytoskeletal 1A OS=Strongylocentrotus purpu... [more]
ACT5_DROME1.002e-8190.12Actin-87E OS=Drosophila melanogaster GN=Act87E PE=... [more]
ACT5C_ANOGA1.002e-8190.74Actin-5C OS=Anopheles gambiae GN=Act5C PE=2 SV=1[more]
ACT4_BOMMO1.002e-8190.74Actin, cytoplasmic A4 OS=Bombyx mori GN=A4 PE=2 SV... [more]
ACT3_BOMMO1.002e-8190.74Actin, cytoplasmic A3 OS=Bombyx mori PE=3 SV=3[more]
ACT3B_HELAM1.002e-8190.74Actin-A3b, cytoplasmic OS=Helicoverpa armigera GN=... [more]
ACT3A_HELAM1.002e-8190.74Actin, cytoplasmic A3a OS=Helicoverpa armigera GN=... [more]
ACT2_HALRO1.002e-8187.43Actin, muscle 2/4/4A OS=Halocynthia roretzi GN=MA2... [more]
ACT2_DROME1.002e-8190.74Actin-42A OS=Drosophila melanogaster GN=Act42A PE=... [more]
ACT1_SCHCO1.002e-8182.54Actin-1 OS=Schizophyllum commune GN=ACT1 PE=2 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C5-003-007-F07-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744350 ID=EY744350; Name=EY744350; organism=Citrus sinensis; type=EST; length=1043bp
CCACGCGTCCGACTAAAAAAAACAAAACCCGGAGGCGTCCATTTTGTGCG
CCTCGTAATTCGCTCGTTCTCATCTCATAACCGGTAGCAGAAGATGGCAG
ACGGTGAGGATATTCAGCCACTTGTTTGTGATAATGGAACAGGAATGGTT
AAGGCTGGGTTTGCCGGAGATGATGCTCCACGGGCGGTGTTCCCCAGTAT
TGTTGGTCGTCCACGTCACACTGGTGTGATGGTTGGCATGGGTCAGAAGG
ATGCGTATGTTGGTGATGAGGCTCAATCGAAGAGAGGTATTTTGACTTTG
AAATACCCCATTGAGCATGGTATTGTGAGCAACTGGGATGACATGGAGAA
GATCTGGCATCACACCTTCTACAATGAGCTTCGTGTTGCCCCTGAAGAGC
ACCCTGTTCTTCTTACTGAGGCTCCTCTCAATCCGAAGGCTAATCGCGAG
AAGATGACCCAGATTATGTTTGAGACCTTTAATGCTCCCNNTACGNNTGT
TGCCATCCAGGCCGTTCTTTCCTTGTATGCGAGTGGTCGTACCACTGGTA
TTGTGTTGGACTCTGGTGATGGTGTCAGCCATACAGATCCTAAATTATGA
AGGGTATGCCCCTCCCCCCTTGCAATACTTCCTCCTGACCTTGGCTGGGC
CGGGACCTCCCTGGATAAATTTGATCAAAATCCCCCCTTGACCGTGGGGT
AATCCTTTCCCCCCCCCCGCCTCACCGCGAAATTTTTGCAGGGCCTAGAG
GGGAAAACTTTGCCTTAAGATCGCCTCTTGAACATATGAAACGGGGACCT
TGAAACACCCCCAAGAACACACTTTCCGCAAATTCGGAAAAAAACCCCTC
AATTTGAACCGAAGGGCAAGGGGGCTTCCCAAATTTGGGGGCCAAGAACC
CATTTCCAGGGTGTCGCATGACGGACCTTTCTTTACCAACACATACCCCA
AATGACTGGTAATATGGGTGGCTGGAGGTCGGCCTCGGTCCATCCATGCC
CGAAACACGCCCGCCTATTCTGTATCACCTACCCCCGATGTCG
back to top