EY744318

Overview
NameEY744318
Unique NameEY744318
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length968
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744318 vs. ExPASy Swiss-Prot
Match: TPIS_PSEA8 (Triosephosphate isomerase OS=Pseudomonas aeruginosa (strain LESB58) GN=tpiA PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.855e-16
Identity = 50/133 (37.59%), Postives = 73/133 (54.89%), Query Frame = 2
Query:  245 VGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDR-IEIAAQNSWVGK-GGAFTGEISVEQLKDIGCKWVVLGHSERKHVIGEDDPFIGKKAAYALSEGLGVIAWIGGTVAKKKNRK 637
            V GNWK +GT  S+ +L+  L    L            ++I QV   L  + I++ AQNS V    GA TGE +  QL D+GC  V++GHSER+ ++GE D  + +K A A S GL  +  +G T A+++  K
Sbjct:    6 VAGNWKMHGTHSSVAELIKGLRQLALPSGVDVAVMPPCLFISQVIQGLAGKAIDVGAQNSAVEPMQGALTGETAPSQLADVGCSMVLVGHSERRLILGESDEVVSRKFAAAQSCGLVPVLCVGETRAEREAGK 138          
BLAST of EY744318 vs. ExPASy Swiss-Prot
Match: TPIS_RUTMC (Triosephosphate isomerase OS=Ruthia magnifica subsp. Calyptogena magnifica GN=tpiA PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 5.034e-16
Identity = 45/125 (36.00%), Postives = 68/125 (54.40%), Query Frame = 2
Query:  236 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTD-RIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERKHVIGEDDPFIGKKAAYALSEGLGVIAWIG 607
            +  + GNWK N +KE+   LV  +     +           +Y+ QV+  + D ++ + AQN  V K GAFTGEIS + +KD G K+V++GHSER+ + GE D  + +K   AL   L  +  IG
Sbjct:    3 QIIIAGNWKMNASKEATNTLVIGILSGMADVKSKVIVCVPSLYMSQVEVLVVDSQLNLGAQNLNVNKLGAFTGEISADMIKDFGAKYVIVGHSERRSLYGETDEIVAQKVQVALDNNLTPLFCIG 127          
BLAST of EY744318 vs. ExPASy Swiss-Prot
Match: TPIS_ERWCT (Triosephosphate isomerase OS=Erwinia carotovora subsp. atroseptica GN=tpiA PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 5.034e-16
Identity = 50/130 (38.46%), Postives = 68/130 (52.31%), Query Frame = 2
Query:  245 VGGNWKCNGTKESITKLVSDLN-DAKLEXXXXXXXXXXFVYIDQVKNSLT-DRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERKHVIGEDDPFIGKKAAYALSEGLGVIAWIGGTVAKKK 628
            V GNWK NG+   + +L++ L  +               +Y+DQ  + L   RI + AQN  V   GAFTGE S E LKDIG K++++GHSER+    E D FI KK       GL  +  IG T A+ +
Sbjct:    6 VMGNWKLNGSTNLVNELIAGLRKELSTVDGCGVAIAPPAIYLDQANHQLAGSRIALGAQNVDVNLSGAFTGETSAEMLKDIGAKYIIIGHSERRTYHKESDEFIAKKFGVLKDAGLIPVLCIGETEAENE 135          
BLAST of EY744318 vs. ExPASy Swiss-Prot
Match: TPIS_SERP5 (Triosephosphate isomerase OS=Serratia proteamaculans (strain 568) GN=tpiA PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.575e-16
Identity = 50/133 (37.59%), Postives = 74/133 (55.64%), Query Frame = 2
Query:  245 VGGNWKCNGTKESITKLVSDL-NDAKLEXXXXXXXXXXFVYIDQVKNSLT-DRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERKHVIGEDDPFIGKKAAYALSEGLGVIAWIGGTVAKKKNRK 637
            V GNWK NG+   + +L++ L N+               +Y+DQ K++L   RI + AQN  V   GAFTGE+S + LKDIG +++++GHSER+    E D  I +K A   + GL  +  IG T A+ +  K
Sbjct:    6 VMGNWKLNGSTHMVNELIAALRNELSSVDGCGVAIAPPVMYLDQAKHALAGSRIALGAQNVDVNLSGAFTGEVSADMLKDIGAQYIIIGHSERRTYHKETDAAIAEKFAVLKTAGLIPVLCIGETDAENEAGK 138          
BLAST of EY744318 vs. ExPASy Swiss-Prot
Match: TPIS_PELCD (Triosephosphate isomerase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=tpiA PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.575e-16
Identity = 49/136 (36.03%), Postives = 70/136 (51.47%), Query Frame = 2
Query:  242 FVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXX-FVYIDQVKNSLTDR-IEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERKHVIGEDDPFIGKKAAYALSEGLGVIAWIGGTVAKKKNRKNF 643
            F+ GNWK + T      LV +L  A  +           F  +  V  +L    I +AAQN +    GAFTGE+S   LKD GC++V++GHSER+ +  E D FI +K    +  GL  I  IG T+ +++  K F
Sbjct:    5 FIAGNWKLHKTSAEAAALVGELKGALSDVVDRDIVVAPVFTSLAAVIATLEKSDISVAAQNCYPENQGAFTGEVSPALLKDAGCRYVIVGHSERRQLFAESDAFINRKVKAVIDAGLSAILCIGETLEEREADKTF 140          
BLAST of EY744318 vs. ExPASy Swiss-Prot
Match: TPIS_RHOBA (Triosephosphate isomerase OS=Rhodopirellula baltica GN=tpiA PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 8.587e-16
Identity = 46/135 (34.07%), Postives = 73/135 (54.07%), Query Frame = 2
Query:  230 SNKFFVGGNWKCNGTKESITKLVSDLNDAK-LEXXXXXXXXXXFVYIDQVKNSLTDR-IEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERKHVIGEDDPFIGKKAAYALSEGLGVIAWIGGTVAKKK 628
            S +  + GNWK N   ES   L   + DA               VY+  V +++    +E+ AQN +  + GAFTGE++   L D+GC++V+LGHSER+ ++GE D  + KK   AL+  L  I  +G T+ +++
Sbjct:    2 SRRILIAGNWKMNMRAESGASLAKGIVDAVGKSPAVEVVLCPPSVYLSGVADAVVGTPVELGAQNLYAAEDGAFTGEVNASMLTDVGCRFVILGHSERRQLMGETDACVAKKLHAALAGNLVPIVCVGETLEQRE 136          
BLAST of EY744318 vs. ExPASy Swiss-Prot
Match: TPIS_ALKOO (Triosephosphate isomerase OS=Alkaliphilus oremlandii (strain OhILAs) GN=tpiA PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 8.587e-16
Identity = 46/137 (33.58%), Postives = 71/137 (51.82%), Query Frame = 2
Query:  236 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTD-RIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERKHVIGEDDPFIGKKAAYALSEGLGVIAWIGGTVAKKKNRKNF 643
            K  + GNWK N   +    LV+ + D   +          F  + QV+ +L    +++ AQN    + GA+TGEIS   LKDIG ++V+LGHSER+    E D  + KK   A+ E L  I  IG ++ +++  + F
Sbjct:    3 KPIIAGNWKMNKVSKEALDLVNQIKDEVHKTEVEVVVCCPFTVLSQVQKALVGTNLKLGAQNMHWEEDGAYTGEISANMLKDIGVEYVILGHSERRQYFNETDETVNKKVKKAIKENLKPIVCIGESLEEREANQTF 139          
BLAST of EY744318 vs. ExPASy Swiss-Prot
Match: TPIS_AZOSB (Triosephosphate isomerase OS=Azoarcus sp. (strain BH72) GN=tpiA PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.465e-15
Identity = 44/129 (34.11%), Postives = 75/129 (58.14%), Query Frame = 2
Query:  245 VGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDR-IEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERKHVIGEDDPFIGKKAAYALSEGLGVIAWIGGTVAKKK 628
            + GNWK NG+      L+ +L  A++           + Y+ Q +  +    IE+ AQ+    + GA+TGE+S   L + GC++V++GHSER+ + G+ D  +G+KAA AL+ GL  I  +G T+A+++
Sbjct:    6 IAGNWKLNGSLAKNAALIDELRRAEMHCVVCVP----YPYLAQAQALVAGSLIELGAQDVSEYEQGAYTGEVSAAMLVEFGCRYVIVGHSERRALFGDSDQVVGRKAASALAAGLTPIVCVGETLAERE 130          
BLAST of EY744318 vs. ExPASy Swiss-Prot
Match: TPIS_PSEA7 (Triosephosphate isomerase OS=Pseudomonas aeruginosa (strain PA7) GN=tpiA PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.913e-15
Identity = 51/133 (38.35%), Postives = 71/133 (53.38%), Query Frame = 2
Query:  245 VGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDR-IEIAAQNSWVGK-GGAFTGEISVEQLKDIGCKWVVLGHSERKHVIGEDDPFIGKKAAYALSEGLGVIAWIGGTVAKKKNRK 637
            V GNWK +GT  S+  L+  L    L            ++I QV   L  + I + AQNS V    GA TGEI+  QL D GC  V++GHSER+ ++GE D  + +K A A S GL  +  +G T A+++  K
Sbjct:    6 VAGNWKMHGTHSSVADLIKGLRQLALPSGVDVAVMPPCLFISQVVQGLAGKAIGVGAQNSAVEPMQGALTGEIAPSQLADAGCGMVLVGHSERRLILGESDEVVSRKFAAAQSCGLVPVLCVGETRAEREAGK 138          
BLAST of EY744318 vs. ExPASy Swiss-Prot
Match: TPIS_CYTH3 (Triosephosphate isomerase OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=tpiA PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.913e-15
Identity = 49/134 (36.57%), Postives = 71/134 (52.99%), Query Frame = 2
Query:  236 KFFVGGNWKCNGTKESITKLVSDL-NDAKLEXXXXXXXXXXFVYID--QVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERKHVIGEDDPFIGKKAAYALSEGLGVIAWIGGTVAKKK 628
            K  + GNWK N T E    L S++ N AK E            YI    V   + D++ I AQN +  + GAFTGEIS   LK +G K+V++GHSER+   GE +  +  K   +L+ GL  +   G T+A+++
Sbjct:    3 KKVIAGNWKMNKTLEEGLSLASEVANMAKDEVPADVNLVMCIPYISLAAVSKVINDKVAIGAQNVYQKESGAFTGEISAPMLKSVGVKYVIIGHSERREYFGETNQQLADKVTISLANGLTPLFCCGETLAQRE 136          
The following BLAST results are available for this feature:
BLAST of EY744318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 375
Match NameE-valueIdentityDescription
TPIS_PSEA83.855e-1637.59Triosephosphate isomerase OS=Pseudomonas aeruginos... [more]
TPIS_RUTMC5.034e-1636.00Triosephosphate isomerase OS=Ruthia magnifica subs... [more]
TPIS_ERWCT5.034e-1638.46Triosephosphate isomerase OS=Erwinia carotovora su... [more]
TPIS_SERP56.575e-1637.59Triosephosphate isomerase OS=Serratia proteamacula... [more]
TPIS_PELCD6.575e-1636.03Triosephosphate isomerase OS=Pelobacter carbinolic... [more]
TPIS_RHOBA8.587e-1634.07Triosephosphate isomerase OS=Rhodopirellula baltic... [more]
TPIS_ALKOO8.587e-1633.58Triosephosphate isomerase OS=Alkaliphilus oremland... [more]
TPIS_AZOSB1.465e-1534.11Triosephosphate isomerase OS=Azoarcus sp. (strain ... [more]
TPIS_PSEA71.913e-1538.35Triosephosphate isomerase OS=Pseudomonas aeruginos... [more]
TPIS_CYTH31.913e-1536.57Triosephosphate isomerase OS=Cytophaga hutchinsoni... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-007-C10-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744318 ID=EY744318; Name=EY744318; organism=Citrus sinensis; type=EST; length=968bp
CAAAGGCTGAGCAAGAGCAAGAGCAAGAGCCAAAGCAGCTGAGATTATAA
TTTGACTTTCACTTTGACTTTTCACAATGGCGTCAATGGTCTCCACAAAC
TGCGCTCAATTCTCCGGCCTGCGCCGCTCATCGCCCACACAGTCTTTTTC
ACAGCACGTCAACTCTCACCTCCGCCTCTTCTCTTCTCGTAGACCTCGCC
GCGGCAGCAGCGTTGTCGCCATGGCCAGCTCCAACAAGTTCTTTGTTGGG
GGAAACTGGAAGTGTAATGGAACAAAGGAATCTATCACCAAGCTTGTTTC
GGACCTGAACGATGCAAAGTTGGAGGCAGATGTTGATGTTGTGGTAGCGC
CTCCCTTTGTTTACATTGATCAAGTGAAGAATTCATTAACAGATAGAATT
GAGATAGCAGCTCAGAACTCTTGGGTCGGAAAAGGTGGAGCATTTACAGG
AGAAATCAGTGTGGAACAACTGAAAGATATTGGCTGCAAGTGGGTTGTTC
TGGGGCATTCTGAGCGCAAACATGTTATTGGGGAAGATGATCCGTTTATA
GGGAAGAAAGCTGCCTATGCCTTGAGCGAGGGACTTGGTGTAATAGCTTG
GATCGGGGGAACAGTTGCAAAAAAAAAAAACAGGAAAAACTTTTTATGGC
CTGTTTTCAACCAAATTAAAAGCTAATGCAAAGGCTATACCCCAAGTGGG
AAAAAGGAACACCTTGCCAAAAAAACCCTGAATGGGCAATTCGAAACTGG
AAAAAGGGGGCCCACCCCCAAGACAGGGCCAAGAAAAGAAATGCGTGCTC
CTTTCGAGAATAGGGCTAAAAAAAAGGGGTCTCACACAAAAAATTGGCAT
ACAAAAAAACAAACAATATGCAAGGAGAGGAGGCGATAAGAATGGGAAAA
CACAATTGGCGGCGAAAAATACTTCAAAAACAAAAACAAAGAAATAATAA
GGGAAGGGGTTTTCTCCC
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