EY744296

Overview
NameEY744296
Unique NameEY744296
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length962
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744296 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNP6 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.950e-13
Identity = 41/105 (39.05%), Postives = 59/105 (56.19%), Query Frame = 1
Query:  292 RIVYLGMPIVSAVTELLIAQFMWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLY 606
            RI++LG  +   +   ++AQ ++LD +++SKPIYLYINS G         G+ T   AI D M Y KS V T+  G+A    A LL  G+KG R   P+S   ++
Sbjct:   31 RIIFLGQEVTDGLANSIVAQLLYLDSEDSSKPIYLYINSPG---------GSVTAGMAIYDTMQYIKSPVITICLGLAASMGAFLLCAGSKGKRLALPHSRIMIH 126          
BLAST of EY744296 vs. ExPASy Swiss-Prot
Match: CLPP2_PROMT (ATP-dependent Clp protease proteolytic subunit 2 OS=Prochlorococcus marinus (strain NATL2A) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.950e-13
Identity = 42/105 (40.00%), Postives = 59/105 (56.19%), Query Frame = 1
Query:  292 RIVYLGMPIVSAVTELLIAQFMWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLY 606
            RI++LG  +   +   L+AQ ++LD +++SKPIYLYINS G         G+ T   AI D M Y KS + T+  G+A    A LLS G KG R   P+S   ++
Sbjct:   31 RILFLGQEVNDGIANSLVAQMLYLDSEDSSKPIYLYINSPG---------GSVTAGLAIYDTMKYVKSDLVTICVGLAASMGAFLLSAGTKGKRLALPHSRIMIH 126          
BLAST of EY744296 vs. ExPASy Swiss-Prot
Match: CLPP2_PROMM (ATP-dependent Clp protease proteolytic subunit 2 OS=Prochlorococcus marinus (strain MIT 9313) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.159e-13
Identity = 42/105 (40.00%), Postives = 59/105 (56.19%), Query Frame = 1
Query:  292 RIVYLGMPIVSAVTELLIAQFMWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLY 606
            RI++LG  +   V   L+AQ ++LD ++++KPIYLYINS G         G+ T   AI D M Y KS V T+  G+A    A LL+ G KG R   P+S   ++
Sbjct:   31 RILFLGQEVSDGVANSLVAQMLYLDSEDSTKPIYLYINSPG---------GSVTAGLAIYDTMKYVKSDVVTICVGLAASMGAFLLTAGTKGKRLALPHSRIMIH 126          
BLAST of EY744296 vs. ExPASy Swiss-Prot
Match: CLPP3_SYNSC (ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus sp. (strain CC9605) GN=clpP3 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.738e-13
Identity = 41/105 (39.05%), Postives = 60/105 (57.14%), Query Frame = 1
Query:  292 RIVYLGMPIVSAVTELLIAQFMWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLY 606
            RI++LG  +   +   L+AQ ++LD +++SKPIYLYINS G         G+ T   AI D + Y KS+V T+  G+A    A LL+ G KG R   P+S   ++
Sbjct:   31 RILFLGSEVNDGIANSLVAQMLYLDSEDSSKPIYLYINSPG---------GSVTAGLAIYDTIQYVKSEVVTICVGLAASMGAFLLAAGTKGKRVALPHSRIMIH 126          
BLAST of EY744296 vs. ExPASy Swiss-Prot
Match: CLPP3_SYNS9 (ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus sp. (strain CC9902) GN=clpP3 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.738e-13
Identity = 41/105 (39.05%), Postives = 60/105 (57.14%), Query Frame = 1
Query:  292 RIVYLGMPIVSAVTELLIAQFMWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLY 606
            RI++LG  +   +   L+AQ ++LD +++SKPIYLYINS G         G+ T   AI D + Y KS+V T+  G+A    A LL+ G KG R   P+S   ++
Sbjct:   31 RILFLGSEVNDGIANSLVAQMLYLDSEDSSKPIYLYINSPG---------GSVTAGLAIYDTIQYVKSEVVTICVGLAASMGAFLLAAGTKGKRVALPHSRIMIH 126          
BLAST of EY744296 vs. ExPASy Swiss-Prot
Match: CLPP3_SYNPX (ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus sp. (strain WH8102) GN=clpP3 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.738e-13
Identity = 41/105 (39.05%), Postives = 60/105 (57.14%), Query Frame = 1
Query:  292 RIVYLGMPIVSAVTELLIAQFMWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLY 606
            RI++LG  +   +   L+AQ ++LD +++SKPIYLYINS G         G+ T   AI D + Y KS+V T+  G+A    A LL+ G KG R   P+S   ++
Sbjct:   31 RILFLGSEVNDGIANSLVAQMLYLDSEDSSKPIYLYINSPG---------GSVTAGLAIYDTIQYVKSEVVTICVGLAASMGAFLLAAGTKGKRVALPHSRIMIH 126          
BLAST of EY744296 vs. ExPASy Swiss-Prot
Match: CLPP2_PROMA (ATP-dependent Clp protease proteolytic subunit 2 OS=Prochlorococcus marinus GN=clpP2 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.738e-13
Identity = 42/105 (40.00%), Postives = 58/105 (55.24%), Query Frame = 1
Query:  292 RIVYLGMPIVSAVTELLIAQFMWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLY 606
            RI++LG  +   V   L+AQ ++LD ++++KPIYLYINS G         G+ T   AI D M Y KS V T+  G+A    A LLS G K  R   P+S   ++
Sbjct:   31 RILFLGQEVTDGVANSLVAQMLYLDSEDSTKPIYLYINSPG---------GSVTAGLAIYDTMKYVKSDVVTICVGLAASMGAFLLSAGTKNKRLALPHSRIMIH 126          
BLAST of EY744296 vs. ExPASy Swiss-Prot
Match: CLPP2_PROM9 (ATP-dependent Clp protease proteolytic subunit 2 OS=Prochlorococcus marinus (strain MIT 9312) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.738e-13
Identity = 42/105 (40.00%), Postives = 58/105 (55.24%), Query Frame = 1
Query:  292 RIVYLGMPIVSAVTELLIAQFMWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLY 606
            RI++LG  +   +   L+AQ ++LD D+ SKPIYLYINS G         G+ T   AI D + Y KS V T+  G+A    A LL+ G KG R   P+S   ++
Sbjct:   31 RILFLGQEVNDGIANSLVAQMLYLDSDDNSKPIYLYINSPG---------GSVTAGLAIYDTIKYVKSDVVTICVGLAASMGAFLLAAGTKGKRVALPHSRIMIH 126          
BLAST of EY744296 vs. ExPASy Swiss-Prot
Match: CLPP_THETN (ATP-dependent Clp protease proteolytic subunit OS=Thermoanaerobacter tengcongensis GN=clpP PE=3 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.501e-12
Identity = 47/112 (41.96%), Postives = 60/112 (53.57%), Query Frame = 1
Query:  292 RIVYLGMPIVSAVTELLIAQFMWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLACPWEG 627
            RIV+LG  I      L+IAQ ++L+ ++  K I+LYINS G         G+ T   AI D M Y K  V T+  GMA   AA LL+ GAKG R   PNS   ++   PW G
Sbjct:   28 RIVFLGDEINDTTASLVIAQMLFLEAEDPDKDIWLYINSPG---------GSITAGLAIYDTMQYIKPDVVTLCVGMAASMAAFLLAAGAKGKRFALPNSEIMIHQ--PWGG 128          
BLAST of EY744296 vs. ExPASy Swiss-Prot
Match: CLPP2_PROMP (ATP-dependent Clp protease proteolytic subunit 2 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.960e-12
Identity = 41/105 (39.05%), Postives = 57/105 (54.29%), Query Frame = 1
Query:  292 RIVYLGMPIVSAVTELLIAQFMWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLY 606
            RI++LG  +   +   L+AQ ++LD D+ +KPIYLYINS G         G+ T   AI D + Y KS V T+  G+A    A LL  G KG R   P+S   ++
Sbjct:   31 RILFLGQEVNDGIANSLVAQMLYLDSDDNTKPIYLYINSPG---------GSVTAGLAIYDTIKYVKSDVVTICVGLAASMGAFLLGAGTKGKRVALPHSRIMIH 126          
The following BLAST results are available for this feature:
BLAST of EY744296 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
CLPP2_SYNP63.950e-1339.05ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP2_PROMT3.950e-1340.00ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP2_PROMM5.159e-1340.00ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP3_SYNSC6.738e-1339.05ATP-dependent Clp protease proteolytic subunit 3 O... [more]
CLPP3_SYNS96.738e-1339.05ATP-dependent Clp protease proteolytic subunit 3 O... [more]
CLPP3_SYNPX6.738e-1339.05ATP-dependent Clp protease proteolytic subunit 3 O... [more]
CLPP2_PROMA6.738e-1340.00ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP2_PROM96.738e-1340.00ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP_THETN1.501e-1241.96ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP2_PROMP1.960e-1239.05ATP-dependent Clp protease proteolytic subunit 2 O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-007-A10-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744296 ID=EY744296; Name=EY744296; organism=Citrus sinensis; type=EST; length=962bp
GAAAACTACAAGAATGTGCCCCGTCACCTTTATGGCCTTACACCTTCACA
GATGGACATGTTCATGACAGAAGAGAACCCTGTGTGCCGGCAAGCAGCGA
GTGTAACAGAGGAAACCATTTCTTCTGCCCACCATTATTTGAATAATGGG
GGGATGTGGAGTCTATCTGGCATGAGTGATAGGGGCCCTTCAAAGTATAG
TATGAGTGTGAGCATGTATCGTGGAGGAGGTGGAGTATATGATATGCCCC
AATCTGCTCCTCCTGACTTACCTTCTTTGCTGTTAGATGCTCGGATTGTC
TATCTTGGAATGCCGATTGTATCTGCAGTGACTGAGCTTCTTATTGCTCA
GTTTATGTGGTTGGATTTTGATAATGCCTCAAAGCCTATATATCTATACA
TAAATTCCTCTGGGACACAGAATGAAAAGAAGGAGAGTGTTGGAGCCGAA
ACTGATGCATATGCTATAGCTGATGCCATGGCTTACTGCAAATCAAAAGT
CTATACAGTAAATTGTGGCATGGCATATGGTCAAGCAGCAATGCTTCTAT
CTGTTGGAGCAAAGGGTTACCGCGGTTTACAGCCAAATTCTTCCACAAAA
TTATATTTGGCCTGTCCTTGGGAAGGCGAAGTGGCCCCCTTACTGGACTG
GGGGCCCAAGGCCAAAAATCTTAAAACCAACGCTTGAAAGCTACTTTGAG
CTTTTAGCCAAAAGGAAAAGGAAAACCCTAGGGAAAAATTTGCTAAAAAC
CTCCCACCAACCCTAATAACTTGCCCCACAAAAAAAACCTTTAAGTGAAT
TGGCCCTTCCCCAAATCAAAATATCCCACTTCTCCGGGAGCCGCCTATCC
TGAAAAACCGGGGATTTACCAATTATTTCTCTCTCTTACCCACAAAATGC
GCCCCGTGGAAGAAAAAAAACAAACGAGAGGGGCCCCCCGATCAAACCTT
CCTCTTCTGGGA
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