EY744296

Overview
NameEY744296
Unique NameEY744296
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length962
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744296 vs. ExPASy Swiss-Prot
Match: CLPP_THEPX (ATP-dependent Clp protease proteolytic subunit OS=Thermoanaerobacter sp. (strain X514) GN=clpP PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.560e-12
Identity = 44/105 (41.90%), Postives = 58/105 (55.24%), Query Frame = 1
Query:  292 RIVYLGMPIVSAVTELLIAQFMWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLY 606
            RIV+LG  I      L+IAQ ++L+ ++  K I+LYINS G         G+ T  +AI D M Y K  V T+  GMA   AA LL+ GAKG R   PNS   ++
Sbjct:   28 RIVFLGEEINDTTASLVIAQLLFLEAEDPDKDIWLYINSPG---------GSITAGFAIYDTMQYIKPDVVTLCVGMAASMAAFLLAAGAKGKRFALPNSEIMIH 123          
BLAST of EY744296 vs. ExPASy Swiss-Prot
Match: CLPP_THEP3 (ATP-dependent Clp protease proteolytic subunit OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=clpP PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.560e-12
Identity = 44/105 (41.90%), Postives = 58/105 (55.24%), Query Frame = 1
Query:  292 RIVYLGMPIVSAVTELLIAQFMWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLY 606
            RIV+LG  I      L+IAQ ++L+ ++  K I+LYINS G         G+ T  +AI D M Y K  V T+  GMA   AA LL+ GAKG R   PNS   ++
Sbjct:   28 RIVFLGEEINDTTASLVIAQLLFLEAEDPDKDIWLYINSPG---------GSITAGFAIYDTMQYIKPDVVTLCVGMAASMAAFLLAAGAKGKRFALPNSEIMIH 123          
BLAST of EY744296 vs. ExPASy Swiss-Prot
Match: CLPP2_BACHD (ATP-dependent Clp protease proteolytic subunit 2 OS=Bacillus halodurans GN=clpP2 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.704e-12
Identity = 40/105 (38.10%), Postives = 58/105 (55.24%), Query Frame = 1
Query:  292 RIVYLGMPIVSAVTELLIAQFMWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLY 606
            RIV+LG  I   +   ++AQ ++L+ +N  K IYLYINS G         G+ +  +AI D M + K  ++T+  GMA   AA+LL  G KG R   PNS   ++
Sbjct:   29 RIVFLGAAIDDQIANSIVAQLLFLEAENPKKDIYLYINSPG---------GSTSAGFAIYDTMQFVKPSIHTICTGMAASFAAILLLAGTKGKRFALPNSEIMIH 124          
BLAST of EY744296 vs. ExPASy Swiss-Prot
Match: CLPP_DESVM (ATP-dependent Clp protease proteolytic subunit OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=clpP PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 7.450e-12
Identity = 43/105 (40.95%), Postives = 55/105 (52.38%), Query Frame = 1
Query:  292 RIVYLGMPIVSAVTELLIAQFMWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLY 606
            RI+ LG PI   V  L+ AQ ++L+ +N  K IYLYINS G         G+ T   AI D M Y  S V T+  G A    A+LL+ GA G R   PNS   ++
Sbjct:   27 RIILLGTPIDDQVASLICAQLLFLESENPEKEIYLYINSPG---------GSVTAGMAIYDTMQYITSPVATLCLGQAASMGALLLAAGAPGMRHALPNSRIMIH 122          
BLAST of EY744296 vs. ExPASy Swiss-Prot
Match: CLPP2_DESHY (ATP-dependent Clp protease proteolytic subunit 2 OS=Desulfitobacterium hafniense (strain Y51) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 7.450e-12
Identity = 38/105 (36.19%), Postives = 60/105 (57.14%), Query Frame = 1
Query:  292 RIVYLGMPIVSAVTELLIAQFMWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLY 606
            RI++LG P+   V  L++AQ ++L+ ++  K I+LYINS G         G+ +   AI D M Y ++ V+T+  G+A    A LL+ GAKG R   PN+   ++
Sbjct:   29 RIIFLGGPVTDDVANLVVAQMLFLEAEDPEKDIFLYINSPG---------GSISAGMAIYDTMQYIRADVHTICVGLAASMGAFLLTAGAKGKRQALPNAEILIH 124          
BLAST of EY744296 vs. ExPASy Swiss-Prot
Match: CLPP_THELT (ATP-dependent Clp protease proteolytic subunit OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=clpP PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.729e-12
Identity = 47/119 (39.50%), Postives = 63/119 (52.94%), Query Frame = 1
Query:  292 RIVYLGMPIVSAVTELLIAQFMWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLACPWEGEVAPLLD 648
            RIV+LG  I   V  L++AQ ++L+ ++  K I LYINS G         G+ T   AI D M Y KS V T+  G A   AA+LL+ G KG R   PN+  ++ L  P  G   P+ D
Sbjct:   32 RIVFLGYAIDDHVANLVVAQLLFLEAEDPDKDIQLYINSPG---------GSVTAGLAIYDTMQYIKSDVVTICVGQAASMAAVLLASGTKGKRFALPNA--RIMLHQPLGGAEGPVKD 139          
BLAST of EY744296 vs. ExPASy Swiss-Prot
Match: CLPP_CLONN (ATP-dependent Clp protease proteolytic subunit OS=Clostridium novyi (strain NT) GN=clpP PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.729e-12
Identity = 41/105 (39.05%), Postives = 56/105 (53.33%), Query Frame = 1
Query:  292 RIVYLGMPIVSAVTELLIAQFMWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLY 606
            RI++LG  +      L++AQ ++L+ ++  K IYLYINS G         G+ T   AI D M Y K  V T+  GMA    A LL+ GAKG R   PNS   ++
Sbjct:   28 RIIFLGEEVNDVTASLVVAQLLFLEAEDPDKDIYLYINSPG---------GSITAGMAIYDTMQYIKPDVSTICIGMAASMGAFLLTAGAKGKRFALPNSEIMIH 123          
BLAST of EY744296 vs. ExPASy Swiss-Prot
Match: CLPP3_SYNY3 (Probable ATP-dependent Clp protease proteolytic subunit 3 OS=Synechocystis sp. (strain PCC 6803) GN=clpP3 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.271e-11
Identity = 39/105 (37.14%), Postives = 59/105 (56.19%), Query Frame = 1
Query:  292 RIVYLGMPIVSAVTELLIAQFMWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLY 606
            RI++LG  +  ++   ++A  ++LD D+ SKPIYLYINS G         G+ T   AI D M Y K++V T+  G+A    A LL+ GA G R   P++   ++
Sbjct:   31 RIIFLGQEVNDSIANRIVAFLLYLDSDDPSKPIYLYINSPG---------GSVTAGMAIYDTMQYIKAEVITICVGLAASMGAFLLASGAPGKRLALPHARIMIH 126          
BLAST of EY744296 vs. ExPASy Swiss-Prot
Match: CLPP_CALS8 (ATP-dependent Clp protease proteolytic subunit OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=clpP PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.167e-11
Identity = 41/105 (39.05%), Postives = 56/105 (53.33%), Query Frame = 1
Query:  292 RIVYLGMPIVSAVTELLIAQFMWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLY 606
            RIV L   I   +  L++AQ ++L+ ++  K IYLYINS G         G+ T  +AI D + Y K  V T+  GMA    A LL+ GAKG R   PNS   ++
Sbjct:   29 RIVILSGEITDDIASLIVAQLLFLEAEDPDKDIYLYINSPG---------GSVTAGFAIYDTIQYIKPDVSTICVGMAASMGAFLLAAGAKGKRFALPNSEIMIH 124          
BLAST of EY744296 vs. ExPASy Swiss-Prot
Match: CLPP2_ARATH (ATP-dependent Clp protease proteolytic subunit 2, mitochondrial OS=Arabidopsis thaliana GN=CLPP2 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.167e-11
Identity = 37/105 (35.24%), Postives = 60/105 (57.14%), Query Frame = 1
Query:  292 RIVYLGMPIVSAVTELLIAQFMWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLY 606
            RI+ +  PI    + +++AQ ++L+ +N SKPI++Y+NS G         G  T   AI D M Y +S + T+  G A   A++LL+ GAKG R   PN++  ++
Sbjct:   57 RIICINGPINDDTSHVVVAQLLYLESENPSKPIHMYLNSPG---------GHVTAGLAIYDTMQYIRSPISTICLGQAASMASLLLAAGAKGQRRSLPNATVMIH 152          
The following BLAST results are available for this feature:
BLAST of EY744296 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
CLPP_THEPX2.560e-1241.90ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_THEP32.560e-1241.90ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP2_BACHD5.704e-1238.10ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP_DESVM7.450e-1240.95ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP2_DESHY7.450e-1236.19ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP_THELT9.729e-1239.50ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_CLONN9.729e-1239.05ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP3_SYNY31.271e-1137.14Probable ATP-dependent Clp protease proteolytic su... [more]
CLPP_CALS82.167e-1139.05ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP2_ARATH2.167e-1135.24ATP-dependent Clp protease proteolytic subunit 2, ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-007-A10-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744296 ID=EY744296; Name=EY744296; organism=Citrus sinensis; type=EST; length=962bp
GAAAACTACAAGAATGTGCCCCGTCACCTTTATGGCCTTACACCTTCACA
GATGGACATGTTCATGACAGAAGAGAACCCTGTGTGCCGGCAAGCAGCGA
GTGTAACAGAGGAAACCATTTCTTCTGCCCACCATTATTTGAATAATGGG
GGGATGTGGAGTCTATCTGGCATGAGTGATAGGGGCCCTTCAAAGTATAG
TATGAGTGTGAGCATGTATCGTGGAGGAGGTGGAGTATATGATATGCCCC
AATCTGCTCCTCCTGACTTACCTTCTTTGCTGTTAGATGCTCGGATTGTC
TATCTTGGAATGCCGATTGTATCTGCAGTGACTGAGCTTCTTATTGCTCA
GTTTATGTGGTTGGATTTTGATAATGCCTCAAAGCCTATATATCTATACA
TAAATTCCTCTGGGACACAGAATGAAAAGAAGGAGAGTGTTGGAGCCGAA
ACTGATGCATATGCTATAGCTGATGCCATGGCTTACTGCAAATCAAAAGT
CTATACAGTAAATTGTGGCATGGCATATGGTCAAGCAGCAATGCTTCTAT
CTGTTGGAGCAAAGGGTTACCGCGGTTTACAGCCAAATTCTTCCACAAAA
TTATATTTGGCCTGTCCTTGGGAAGGCGAAGTGGCCCCCTTACTGGACTG
GGGGCCCAAGGCCAAAAATCTTAAAACCAACGCTTGAAAGCTACTTTGAG
CTTTTAGCCAAAAGGAAAAGGAAAACCCTAGGGAAAAATTTGCTAAAAAC
CTCCCACCAACCCTAATAACTTGCCCCACAAAAAAAACCTTTAAGTGAAT
TGGCCCTTCCCCAAATCAAAATATCCCACTTCTCCGGGAGCCGCCTATCC
TGAAAAACCGGGGATTTACCAATTATTTCTCTCTCTTACCCACAAAATGC
GCCCCGTGGAAGAAAAAAAACAAACGAGAGGGGCCCCCCGATCAAACCTT
CCTCTTCTGGGA
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