EY744296

Overview
NameEY744296
Unique NameEY744296
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length962
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744296 vs. ExPASy Swiss-Prot
Match: CLPP_THET8 (ATP-dependent Clp protease proteolytic subunit OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=clpP PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.697e-11
Identity = 43/113 (38.05%), Postives = 64/113 (56.64%), Query Frame = 1
Query:  292 RIVYLGMPIVSAVTELLIAQFMWLDFDNASKPIYLYINSSGTQNEKKESVGAETDA-YAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLACPWEG 627
            RI++LG PI + V  +++AQ ++LD  N ++ I LYINS           G E DA  AI D M + ++ V T+  GMA   AA++L+ G KG R   P++  K+ +  PW G
Sbjct:   27 RIIFLGTPIDAQVANVVVAQLLFLDAQNPNQEIKLYINSP----------GGEVDAGLAIYDTMQFVRAPVSTIVIGMAASMAAVILAAGEKGRRYALPHA--KVMIHQPWGG 127          
BLAST of EY744296 vs. ExPASy Swiss-Prot
Match: CLPP_THET2 (ATP-dependent Clp protease proteolytic subunit OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=clpP PE=3 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.697e-11
Identity = 43/113 (38.05%), Postives = 64/113 (56.64%), Query Frame = 1
Query:  292 RIVYLGMPIVSAVTELLIAQFMWLDFDNASKPIYLYINSSGTQNEKKESVGAETDA-YAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLACPWEG 627
            RI++LG PI + V  +++AQ ++LD  N ++ I LYINS           G E DA  AI D M + ++ V T+  GMA   AA++L+ G KG R   P++  K+ +  PW G
Sbjct:   27 RIIFLGTPIDAQVANVVVAQLLFLDAQNPNQEIKLYINSP----------GGEVDAGLAIYDTMQFVRAPVSTIVIGMAASMAAVILAAGEKGRRYALPHA--KVMIHQPWGG 127          
BLAST of EY744296 vs. ExPASy Swiss-Prot
Match: CLPP_AQUAE (ATP-dependent Clp protease proteolytic subunit OS=Aquifex aeolicus GN=clpP PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.829e-11
Identity = 42/105 (40.00%), Postives = 55/105 (52.38%), Query Frame = 1
Query:  292 RIVYLGMPIVSAVTELLIAQFMWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLY 606
            RIV LG PI   V  L++AQ ++L+  +  K IYLYINS G         G+ T   AI D M Y K  V T+  G A    A+LL+ GA G R   P+S   ++
Sbjct:   35 RIVLLGSPIDDHVANLIVAQLLFLESQDPDKDIYLYINSPG---------GSVTAGLAIYDTMQYIKPDVVTICMGQAASMGAILLAAGAPGKRYALPHSRIMIH 130          
BLAST of EY744296 vs. ExPASy Swiss-Prot
Match: CLPP_THIDA (ATP-dependent Clp protease proteolytic subunit OS=Thiobacillus denitrificans (strain ATCC 25259) GN=clpP PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.306e-11
Identity = 39/105 (37.14%), Postives = 56/105 (53.33%), Query Frame = 1
Query:  292 RIVYLGMPIVSAVTELLIAQFMWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLY 606
            R+++L  P+  A   L++AQ ++L+ +N  K IYLYINS G         G+ +   AI D M + K  V T+  G A    A LL+ GAKG R   PNS   ++
Sbjct:   42 RVIFLVGPVNDATANLIVAQMLFLESENPDKDIYLYINSPG---------GSVSAGLAIYDTMQFIKPDVSTLCIGQAASMGAFLLTAGAKGKRYCLPNSRVMIH 137          
BLAST of EY744296 vs. ExPASy Swiss-Prot
Match: CLPP_LACPL (ATP-dependent Clp protease proteolytic subunit OS=Lactobacillus plantarum GN=clpP PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.306e-11
Identity = 42/105 (40.00%), Postives = 55/105 (52.38%), Query Frame = 1
Query:  292 RIVYLGMPIVSAVTELLIAQFMWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLY 606
            RI+ L  PI   +   +IAQ ++LD  ++ K IYLYINS G         G  T   AI D M + KS V T+  GMA   A++L S G KG R   PNS   ++
Sbjct:   28 RIIMLSGPIEDNMANAIIAQLLFLDAQDSGKDIYLYINSPG---------GVVTAGLAIYDTMNFIKSDVQTIVMGMAASMASVLASSGTKGKRFALPNSEILIH 123          
BLAST of EY744296 vs. ExPASy Swiss-Prot
Match: CLPP_HALOH (ATP-dependent Clp protease proteolytic subunit OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=clpP PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.306e-11
Identity = 40/105 (38.10%), Postives = 59/105 (56.19%), Query Frame = 1
Query:  292 RIVYLGMPIVSAVTELLIAQFMWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLY 606
            RIV+LG PI   ++ L+IAQ ++L+ ++  K I+LYINS G         G+ T A A+ D + Y K  V T+  G A    A+LL+ G KG R   PN+   ++
Sbjct:   28 RIVFLGHPINDELSNLIIAQLLFLEAEDPDKDIHLYINSPG---------GSVTAALAMYDTIQYIKPDVATICMGQAASAGALLLASGTKGKRYALPNARVMIH 123          
BLAST of EY744296 vs. ExPASy Swiss-Prot
Match: CLPP_EUBE2 (ATP-dependent Clp protease proteolytic subunit OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=clpP PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.306e-11
Identity = 39/105 (37.14%), Postives = 57/105 (54.29%), Query Frame = 1
Query:  292 RIVYLGMPIVSAVTELLIAQFMWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLY 606
            RI++LG  +      L++AQ ++L+ ++ SK I+ YINS G         G+ +  +AI D M Y K  V T+  GMA    A LLS GAKG R   PN+   ++
Sbjct:   28 RIIFLGEEVTDVSANLVVAQMLFLEAEDPSKDIHFYINSPG---------GSVSAGFAIYDTMQYIKCDVSTICIGMAASMGAFLLSGGAKGKRLALPNAEIMIH 123          
BLAST of EY744296 vs. ExPASy Swiss-Prot
Match: CLPP_CLOK5 (ATP-dependent Clp protease proteolytic subunit OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=clpP PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.306e-11
Identity = 41/105 (39.05%), Postives = 53/105 (50.48%), Query Frame = 1
Query:  292 RIVYLGMPIVSAVTELLIAQFMWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLY 606
            RIV L   +      L++AQ ++L+ +N  K IY YINS G         G+ T   AI D M Y KS V T+  GMA    A LL+ G KG R   PNS   ++
Sbjct:   28 RIVMLSEEVNDVTASLIVAQLLFLEAENPDKDIYFYINSPG---------GSITAGMAIYDTMQYIKSDVSTICIGMAASMGAFLLAAGEKGKRFALPNSEIMIH 123          
BLAST of EY744296 vs. ExPASy Swiss-Prot
Match: CLPP_CLOK1 (ATP-dependent Clp protease proteolytic subunit OS=Clostridium kluyveri (strain NBRC 12016) GN=clpP PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.306e-11
Identity = 41/105 (39.05%), Postives = 53/105 (50.48%), Query Frame = 1
Query:  292 RIVYLGMPIVSAVTELLIAQFMWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLY 606
            RIV L   +      L++AQ ++L+ +N  K IY YINS G         G+ T   AI D M Y KS V T+  GMA    A LL+ G KG R   PNS   ++
Sbjct:   28 RIVMLSEEVNDVTASLIVAQLLFLEAENPDKDIYFYINSPG---------GSITAGMAIYDTMQYIKSDVSTICIGMAASMGAFLLAAGEKGKRFALPNSEIMIH 123          
BLAST of EY744296 vs. ExPASy Swiss-Prot
Match: CLPP1_ANASP (ATP-dependent Clp protease proteolytic subunit 1 OS=Anabaena sp. (strain PCC 7120) GN=clpP1 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.306e-11
Identity = 40/105 (38.10%), Postives = 57/105 (54.29%), Query Frame = 1
Query:  292 RIVYLGMPIVSAVTELLIAQFMWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLY 606
            RIV+LG  + S +  L++AQ ++LD ++  K IYLYINS G         G+ T    I D M + +  V T+  G+A    A LLS GAKG R   P+S   ++
Sbjct:   27 RIVFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPG---------GSVTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIH 122          
The following BLAST results are available for this feature:
BLAST of EY744296 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
CLPP_THET83.697e-1138.05ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_THET23.697e-1138.05ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_AQUAE4.829e-1140.00ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_THIDA6.306e-1137.14ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_LACPL6.306e-1140.00ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_HALOH6.306e-1138.10ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_EUBE26.306e-1137.14ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_CLOK56.306e-1139.05ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_CLOK16.306e-1139.05ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP1_ANASP6.306e-1138.10ATP-dependent Clp protease proteolytic subunit 1 O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-007-A10-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744296 ID=EY744296; Name=EY744296; organism=Citrus sinensis; type=EST; length=962bp
GAAAACTACAAGAATGTGCCCCGTCACCTTTATGGCCTTACACCTTCACA
GATGGACATGTTCATGACAGAAGAGAACCCTGTGTGCCGGCAAGCAGCGA
GTGTAACAGAGGAAACCATTTCTTCTGCCCACCATTATTTGAATAATGGG
GGGATGTGGAGTCTATCTGGCATGAGTGATAGGGGCCCTTCAAAGTATAG
TATGAGTGTGAGCATGTATCGTGGAGGAGGTGGAGTATATGATATGCCCC
AATCTGCTCCTCCTGACTTACCTTCTTTGCTGTTAGATGCTCGGATTGTC
TATCTTGGAATGCCGATTGTATCTGCAGTGACTGAGCTTCTTATTGCTCA
GTTTATGTGGTTGGATTTTGATAATGCCTCAAAGCCTATATATCTATACA
TAAATTCCTCTGGGACACAGAATGAAAAGAAGGAGAGTGTTGGAGCCGAA
ACTGATGCATATGCTATAGCTGATGCCATGGCTTACTGCAAATCAAAAGT
CTATACAGTAAATTGTGGCATGGCATATGGTCAAGCAGCAATGCTTCTAT
CTGTTGGAGCAAAGGGTTACCGCGGTTTACAGCCAAATTCTTCCACAAAA
TTATATTTGGCCTGTCCTTGGGAAGGCGAAGTGGCCCCCTTACTGGACTG
GGGGCCCAAGGCCAAAAATCTTAAAACCAACGCTTGAAAGCTACTTTGAG
CTTTTAGCCAAAAGGAAAAGGAAAACCCTAGGGAAAAATTTGCTAAAAAC
CTCCCACCAACCCTAATAACTTGCCCCACAAAAAAAACCTTTAAGTGAAT
TGGCCCTTCCCCAAATCAAAATATCCCACTTCTCCGGGAGCCGCCTATCC
TGAAAAACCGGGGATTTACCAATTATTTCTCTCTCTTACCCACAAAATGC
GCCCCGTGGAAGAAAAAAAACAAACGAGAGGGGCCCCCCGATCAAACCTT
CCTCTTCTGGGA
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