EY744261

Overview
NameEY744261
Unique NameEY744261
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1022
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744261 vs. ExPASy Swiss-Prot
Match: ODPB_CHLAT (Pyruvate dehydrogenase E1 component subunit beta OS=Chlorokybus atmophyticus GN=pdhB PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.535e-20
Identity = 45/70 (64.29%), Postives = 57/70 (81.43%), Query Frame = 2
Query:  362 LFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLTEKYGDLRVLDTPIAENSFTGMGIGAALTGL 571
            LFEAL++ ++EEM+R+  V ++GED+GHYGGSYKVT+GL  KYG  RV+DTPIAE SF G  +GAA TGL
Sbjct:    6 LFEALQKAIDEEMEREKRVVLIGEDIGHYGGSYKVTQGLYGKYGKHRVIDTPIAEYSFVGAAVGAAATGL 75          

HSP 2 Score: 21.557 bits (44), Expect = 4.535e-20
Identity = 15/33 (45.45%), Postives = 18/33 (54.55%), Query Frame = 1
Query:  577 PIVEGMKMGISFFNLSTIFSNNLRVWPHYTSGG 675
            P+VEGM M       S I SNN+ +    TSGG
Sbjct:   77 PVVEGMNMAFILLAYSQI-SNNMGML-CATSGG 107          
BLAST of EY744261 vs. ExPASy Swiss-Prot
Match: ODPB_ARATH (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Arabidopsis thaliana GN=PDH2 PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 5.800e-18
Identity = 43/74 (58.11%), Postives = 54/74 (72.97%), Query Frame = 2
Query:  353 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLTEKYGDLRVLDTPIAENSFTGMGIGAALTGLE 574
            E+ + +AL   ++EEM  DP V VMGE+VG Y G+YK+TKGL EKYG  RV DTPI E  FTG+G+GAA  GL+
Sbjct:   35 EMTVRDALNSAIDEEMSADPKVFVMGEEVGQYQGAYKITKGLLEKYGPERVYDTPITEAGFTGIGVGAAYAGLK 108          
BLAST of EY744261 vs. ExPASy Swiss-Prot
Match: ODPB_RAT (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus GN=Pdhb PE=1 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 3.183e-16
Identity = 36/73 (49.32%), Postives = 57/73 (78.08%), Query Frame = 2
Query:  353 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLTEKYGDLRVLDTPIAENSFTGMGIGAALTGL 571
            +L + EA+ +G++EE++RD  V ++GE+V  Y G+YKV++GL +KYGD R++DTPI+E  F G+ +GAA+ GL
Sbjct:   32 QLTVREAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGL 104          
BLAST of EY744261 vs. ExPASy Swiss-Prot
Match: ODPB_PEA (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 3.183e-16
Identity = 42/74 (56.76%), Postives = 53/74 (71.62%), Query Frame = 2
Query:  353 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLTEKYGDLRVLDTPIAENSFTGMGIGAALTGLE 574
            ++ + +AL   L+ EM  D  V +MGE+VG Y G+YKVTKGL EKYG  RVLDTPI E  FTG+G+GAA  GL+
Sbjct:   25 QMTVRDALNSALDVEMSADSKVFLMGEEVGEYQGAYKVTKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLK 98          
BLAST of EY744261 vs. ExPASy Swiss-Prot
Match: ODPB_MOUSE (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Mus musculus GN=Pdhb PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 3.183e-16
Identity = 36/73 (49.32%), Postives = 57/73 (78.08%), Query Frame = 2
Query:  353 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLTEKYGDLRVLDTPIAENSFTGMGIGAALTGL 571
            +L + EA+ +G++EE++RD  V ++GE+V  Y G+YKV++GL +KYGD R++DTPI+E  F G+ +GAA+ GL
Sbjct:   32 QLTVREAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGL 104          
BLAST of EY744261 vs. ExPASy Swiss-Prot
Match: ODPB_BOVIN (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Bos taurus GN=PDHB PE=1 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 7.090e-16
Identity = 35/68 (51.47%), Postives = 54/68 (79.41%), Query Frame = 2
Query:  368 EALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLTEKYGDLRVLDTPIAENSFTGMGIGAALTGL 571
            EA+ +G++EE++RD  V ++GE+V  Y G+YKV++GL +KYGD R++DTPI+E  F G+ +GAA+ GL
Sbjct:   37 EAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGL 104          
BLAST of EY744261 vs. ExPASy Swiss-Prot
Match: ODPB_ZYMMO (Pyruvate dehydrogenase E1 component subunit beta OS=Zymomonas mobilis GN=pdhB PE=3 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 9.260e-16
Identity = 40/70 (57.14%), Postives = 54/70 (77.14%), Query Frame = 2
Query:  362 LFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLTEKYGDLRVLDTPIAENSFTGMGIGAALTGL 571
            L EALR+ + EEM RD  V VMGE+V  Y G+YKVT+GL +++G  RV+DTPI+E  F+G+G+GAA+ GL
Sbjct:  141 LREALRDAMAEEMRRDDRVFVMGEEVAEYQGAYKVTQGLLQEFGARRVVDTPISEYGFSGIGVGAAMEGL 210          
BLAST of EY744261 vs. ExPASy Swiss-Prot
Match: ODPB_RICFE (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia felis GN=pdhB PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.580e-15
Identity = 39/73 (53.42%), Postives = 53/73 (72.60%), Query Frame = 2
Query:  353 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLTEKYGDLRVLDTPIAENSFTGMGIGAALTGL 571
            ++ + EALR+ ++EEM RD  V VMGE+V  Y G+YKVT+GL E++G  RV+DTPI E  F G+ +GAA  GL
Sbjct:    2 QITVREALRDAMQEEMIRDDKVFVMGEEVAEYQGAYKVTQGLLEQFGPKRVIDTPITEYGFAGLAVGAAFAGL 74          
BLAST of EY744261 vs. ExPASy Swiss-Prot
Match: ODPB_RICBR (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia bellii (strain RML369-C) GN=pdhB PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.580e-15
Identity = 39/73 (53.42%), Postives = 53/73 (72.60%), Query Frame = 2
Query:  353 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLTEKYGDLRVLDTPIAENSFTGMGIGAALTGL 571
            ++ + EALR+ ++EEM RD  V VMGE+V  Y G+YKVT+GL E++G  RV+DTPI E  F G+ +GAA  GL
Sbjct:    2 QITVREALRDAMQEEMIRDDKVFVMGEEVAEYQGAYKVTQGLLEQFGPKRVIDTPITEYGFAGLAVGAAFAGL 74          
BLAST of EY744261 vs. ExPASy Swiss-Prot
Match: ODPB_PONAB (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Pongo abelii GN=PDHB PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.580e-15
Identity = 34/68 (50.00%), Postives = 54/68 (79.41%), Query Frame = 2
Query:  368 EALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLTEKYGDLRVLDTPIAENSFTGMGIGAALTGL 571
            +A+ +G++EE++RD  V ++GE+V  Y G+YKV++GL +KYGD R++DTPI+E  F G+ +GAA+ GL
Sbjct:   37 DAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGL 104          
The following BLAST results are available for this feature:
BLAST of EY744261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
ODPB_CHLAT4.535e-2064.29Pyruvate dehydrogenase E1 component subunit beta O... [more]
ODPB_ARATH5.800e-1858.11Pyruvate dehydrogenase E1 component subunit beta, ... [more]
ODPB_RAT3.183e-1649.32Pyruvate dehydrogenase E1 component subunit beta, ... [more]
ODPB_PEA3.183e-1656.76Pyruvate dehydrogenase E1 component subunit beta, ... [more]
ODPB_MOUSE3.183e-1649.32Pyruvate dehydrogenase E1 component subunit beta, ... [more]
ODPB_BOVIN7.090e-1651.47Pyruvate dehydrogenase E1 component subunit beta, ... [more]
ODPB_ZYMMO9.260e-1657.14Pyruvate dehydrogenase E1 component subunit beta O... [more]
ODPB_RICFE1.580e-1553.42Pyruvate dehydrogenase E1 component subunit beta O... [more]
ODPB_RICBR1.580e-1553.42Pyruvate dehydrogenase E1 component subunit beta O... [more]
ODPB_PONAB1.580e-1550.00Pyruvate dehydrogenase E1 component subunit beta, ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-F08-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744261 ID=EY744261; Name=EY744261; organism=Citrus sinensis; type=EST; length=1022bp
ATTTTAAACAAACATTCAATTTCTTTTCGCCATTTCCTTCTTTCAGTTAA
TAAGAAAAACCTCTCGCAGTTCTTCAAATCGAATCGAATCGAATCCAATG
GCTGCAATTTTCCTGGGCGTGGGAGCTGCAACGGCTTTATCACCGTCCAA
TTGCTTCGATTCTAAGAAGTTCCAGCTCTCAACTCGCAGATCTCTCTCAG
GACGGAAACCGTGGTTCTTAGTTGTCAGATCTGATGGAAGCGTCAACTTA
GGCTCGAATCAAAGATCCCGGAGGACTCAACAGTTGATCACTAATGCAGT
TGCAACGAAGGCTGATTCGGCAGCTTCTACTTCGGCATCAAAGCAAGGGC
ACGAACTTTTACTTTTTGAAGCTCTACGAGAAGGCTTGGAAGAAGAAATG
GACAGAGATCCACATGTATGTGTCATGGGTGAAGATGTTGGTCACTATGG
GGGTTCGTACAAAGTGACCAAAGGCCTGACTGAAAAGTATGGGGATCTCA
GGGTTCTTGACACCCCTATTGCTGAGAACTCTTTCACTGGTATGGGCATT
GGGGCTGCCCTGACTGGGCTTGAGGCCCAATTGTGGAAGGAATGAAAATG
GGGATTTCTTTCTTTAACCTTTCAACCATATTCTCCAACAACTTGAGGGT
ATGGCCCCACTATACTTCTGGTGGGGCAGGTTAACCCTCACAATAATTTA
TCCCTGGGACCTGGGTGGAATTTGGCCAAAAAACTGTGAACTGAAACCTT
CCCCAAGGCCCCTGAAGCCATAATTTTCCAATCAAACCCCCGGAAAAATA
AAATGGGGGGGCCAGGGTCCAAACCCCCATACAAATGGCCAAAGGGGTAT
TGGATAAAAAGACTTATCACCCCCCAAAAGGTAAGAAAACCCATTTTTTA
TCCCTTTTTTACAAAGAAGATGGGTTTTTGTCTTTAATTACACCCCCCAA
AAAGGAAAGAAGAGATATCCCCAAAACAAGAAGAAAAAAAAAATAATTTT
TTTTTTTAAAAAATTCTTGTGT
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