EY744261

Overview
NameEY744261
Unique NameEY744261
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1022
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744261 vs. ExPASy Swiss-Prot
Match: ODPB_HUMAN (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Homo sapiens GN=PDHB PE=1 SV=3)

HSP 1 Score: 83.9593 bits (206), Expect = 1.580e-15
Identity = 34/68 (50.00%), Postives = 54/68 (79.41%), Query Frame = 2
Query:  368 EALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLTEKYGDLRVLDTPIAENSFTGMGIGAALTGL 571
            +A+ +G++EE++RD  V ++GE+V  Y G+YKV++GL +KYGD R++DTPI+E  F G+ +GAA+ GL
Sbjct:   37 DAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGL 104          
BLAST of EY744261 vs. ExPASy Swiss-Prot
Match: ODPB_YEAST (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Saccharomyces cerevisiae GN=PDB1 PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 2.063e-15
Identity = 37/69 (53.62%), Postives = 52/69 (75.36%), Query Frame = 2
Query:  368 EALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLTEKYGDLRVLDTPIAENSFTGMGIGAALTGLE 574
            EAL   + EE+DRD  V ++GE+V  Y G+YKV+KGL +++G+ RV+DTPI E  FTG+ +GAAL GL+
Sbjct:   43 EALNSAMAEELDRDDDVFLIGEEVAQYNGAYKVSKGLLDRFGERRVVDTPITEYGFTGLAVGAALKGLK 111          
BLAST of EY744261 vs. ExPASy Swiss-Prot
Match: ODPB_DICDI (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Dictyostelium discoideum GN=pdhB PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.694e-15
Identity = 36/72 (50.00%), Postives = 52/72 (72.22%), Query Frame = 2
Query:  353 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLTEKYGDLRVLDTPIAENSFTGMGIGAALTG 568
            E+ + +A+   L+EE+ RD  V +MGE+V  Y G+YK+TKGL +KYG  R++DTPI E  F G+G+GAA+ G
Sbjct:   28 EVTVRDAINSALDEELARDEKVFIMGEEVAQYNGAYKITKGLFDKYGGDRIIDTPITEAGFAGIGVGAAMAG 99          
BLAST of EY744261 vs. ExPASy Swiss-Prot
Match: ODPB_RICTY (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia typhi GN=pdhB PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.596e-15
Identity = 38/73 (52.05%), Postives = 53/73 (72.60%), Query Frame = 2
Query:  353 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLTEKYGDLRVLDTPIAENSFTGMGIGAALTGL 571
            ++ + EALR+ ++EEM RD  V V+GE+V  Y G+YKVT+GL E++G  RV+DTPI E  F G+ +GAA  GL
Sbjct:    2 QITVREALRDAMQEEMLRDDKVFVIGEEVAEYQGAYKVTQGLLEQFGSKRVIDTPITEYGFAGLAVGAAFAGL 74          
BLAST of EY744261 vs. ExPASy Swiss-Prot
Match: ODPB_RICPR (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia prowazekii GN=pdhB PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.596e-15
Identity = 38/73 (52.05%), Postives = 53/73 (72.60%), Query Frame = 2
Query:  353 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLTEKYGDLRVLDTPIAENSFTGMGIGAALTGL 571
            ++ + EALR+ ++EEM RD  V V+GE+V  Y G+YKVT+GL E++G  RV+DTPI E  F G+ +GAA  GL
Sbjct:    2 QITVREALRDAMQEEMLRDEKVFVIGEEVAEYQGAYKVTQGLLEQFGSKRVIDTPITEYGFAGLAVGAAFAGL 74          
BLAST of EY744261 vs. ExPASy Swiss-Prot
Match: ODPB_RICCN (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia conorii GN=pdhB PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.596e-15
Identity = 38/73 (52.05%), Postives = 53/73 (72.60%), Query Frame = 2
Query:  353 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLTEKYGDLRVLDTPIAENSFTGMGIGAALTGL 571
            ++ + EALR+ ++EEM RD  V V+GE+V  Y G+YKVT+GL E++G  RV+DTPI E  F G+ +GAA  GL
Sbjct:    2 QITVREALRDAMQEEMIRDDKVFVIGEEVAEYQGAYKVTQGLLEQFGPKRVIDTPITEYGFAGLAVGAAFAGL 74          
BLAST of EY744261 vs. ExPASy Swiss-Prot
Match: ODPB_RHIME (Pyruvate dehydrogenase E1 component subunit beta OS=Rhizobium meliloti GN=pdhB PE=3 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 4.596e-15
Identity = 38/68 (55.88%), Postives = 52/68 (76.47%), Query Frame = 2
Query:  368 EALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLTEKYGDLRVLDTPIAENSFTGMGIGAALTGL 571
            EALR+ + EEM  +  V VMGE+V  Y G+YKVT+GL +++G  RV+DTPI E+ F G+G+GAA+TGL
Sbjct:  142 EALRDAMAEEMRANEDVFVMGEEVAEYQGAYKVTQGLLQEFGARRVVDTPITEHGFAGVGVGAAMTGL 209          
BLAST of EY744261 vs. ExPASy Swiss-Prot
Match: ODPB_SCHPO (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Schizosaccharomyces pombe GN=pdb1 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.337e-14
Identity = 36/73 (49.32%), Postives = 51/73 (69.86%), Query Frame = 2
Query:  353 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLTEKYGDLRVLDTPIAENSFTGMGIGAALTGL 571
            E+ + +AL   +EEEM RD  V ++GE+V  Y G+YK+++GL +K+G  RV+DTPI E  FTG+  GAA  GL
Sbjct:   37 EMTVRDALNSAMEEEMKRDDRVFLIGEEVAQYNGAYKISRGLLDKFGPKRVIDTPITEMGFTGLATGAAFAGL 109          
BLAST of EY744261 vs. ExPASy Swiss-Prot
Match: ODPB_CAEEL (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Caenorhabditis elegans GN=C04C3.3 PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 2.281e-14
Identity = 35/68 (51.47%), Postives = 50/68 (73.53%), Query Frame = 2
Query:  368 EALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLTEKYGDLRVLDTPIAENSFTGMGIGAALTGL 571
            +AL + ++EE+ RD  V +MGE+V  Y G+YK++KGL +K+GD RV+DTPI E  F G+ +GAA  GL
Sbjct:   29 DALNQAMDEEIKRDDRVFLMGEEVAQYDGAYKISKGLWKKHGDKRVVDTPITEMGFAGIAVGAAFAGL 96          
BLAST of EY744261 vs. ExPASy Swiss-Prot
Match: ODBB_BACSU (2-oxoisovalerate dehydrogenase subunit beta OS=Bacillus subtilis GN=bfmBAB PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 5.081e-14
Identity = 35/68 (51.47%), Postives = 52/68 (76.47%), Query Frame = 2
Query:  368 EALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLTEKYGDLRVLDTPIAENSFTGMGIGAALTGL 571
            +A+   ++EEM+RD  V V+GEDVG  GG +K T GL E++G+ RV+DTP+AE++  G+GIGAA+ G+
Sbjct:    8 DAINLAMKEEMERDSRVFVLGEDVGRKGGVFKATAGLYEQFGEERVMDTPLAESAIAGVGIGAAMYGM 75          
The following BLAST results are available for this feature:
BLAST of EY744261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
ODPB_HUMAN1.580e-1550.00Pyruvate dehydrogenase E1 component subunit beta, ... [more]
ODPB_YEAST2.063e-1553.62Pyruvate dehydrogenase E1 component subunit beta, ... [more]
ODPB_DICDI2.694e-1550.00Pyruvate dehydrogenase E1 component subunit beta, ... [more]
ODPB_RICTY4.596e-1552.05Pyruvate dehydrogenase E1 component subunit beta O... [more]
ODPB_RICPR4.596e-1552.05Pyruvate dehydrogenase E1 component subunit beta O... [more]
ODPB_RICCN4.596e-1552.05Pyruvate dehydrogenase E1 component subunit beta O... [more]
ODPB_RHIME4.596e-1555.88Pyruvate dehydrogenase E1 component subunit beta O... [more]
ODPB_SCHPO1.337e-1449.32Pyruvate dehydrogenase E1 component subunit beta, ... [more]
ODPB_CAEEL2.281e-1451.47Pyruvate dehydrogenase E1 component subunit beta, ... [more]
ODBB_BACSU5.081e-1451.472-oxoisovalerate dehydrogenase subunit beta OS=Bac... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-F08-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744261 ID=EY744261; Name=EY744261; organism=Citrus sinensis; type=EST; length=1022bp
ATTTTAAACAAACATTCAATTTCTTTTCGCCATTTCCTTCTTTCAGTTAA
TAAGAAAAACCTCTCGCAGTTCTTCAAATCGAATCGAATCGAATCCAATG
GCTGCAATTTTCCTGGGCGTGGGAGCTGCAACGGCTTTATCACCGTCCAA
TTGCTTCGATTCTAAGAAGTTCCAGCTCTCAACTCGCAGATCTCTCTCAG
GACGGAAACCGTGGTTCTTAGTTGTCAGATCTGATGGAAGCGTCAACTTA
GGCTCGAATCAAAGATCCCGGAGGACTCAACAGTTGATCACTAATGCAGT
TGCAACGAAGGCTGATTCGGCAGCTTCTACTTCGGCATCAAAGCAAGGGC
ACGAACTTTTACTTTTTGAAGCTCTACGAGAAGGCTTGGAAGAAGAAATG
GACAGAGATCCACATGTATGTGTCATGGGTGAAGATGTTGGTCACTATGG
GGGTTCGTACAAAGTGACCAAAGGCCTGACTGAAAAGTATGGGGATCTCA
GGGTTCTTGACACCCCTATTGCTGAGAACTCTTTCACTGGTATGGGCATT
GGGGCTGCCCTGACTGGGCTTGAGGCCCAATTGTGGAAGGAATGAAAATG
GGGATTTCTTTCTTTAACCTTTCAACCATATTCTCCAACAACTTGAGGGT
ATGGCCCCACTATACTTCTGGTGGGGCAGGTTAACCCTCACAATAATTTA
TCCCTGGGACCTGGGTGGAATTTGGCCAAAAAACTGTGAACTGAAACCTT
CCCCAAGGCCCCTGAAGCCATAATTTTCCAATCAAACCCCCGGAAAAATA
AAATGGGGGGGCCAGGGTCCAAACCCCCATACAAATGGCCAAAGGGGTAT
TGGATAAAAAGACTTATCACCCCCCAAAAGGTAAGAAAACCCATTTTTTA
TCCCTTTTTTACAAAGAAGATGGGTTTTTGTCTTTAATTACACCCCCCAA
AAAGGAAAGAAGAGATATCCCCAAAACAAGAAGAAAAAAAAAATAATTTT
TTTTTTTAAAAAATTCTTGTGT
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