EY744261

Overview
NameEY744261
Unique NameEY744261
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1022
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744261 vs. ExPASy Swiss-Prot
Match: ODPB_ASCSU (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Ascaris suum PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.931e-13
Identity = 34/68 (50.00%), Postives = 49/68 (72.06%), Query Frame = 2
Query:  368 EALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLTEKYGDLRVLDTPIAENSFTGMGIGAALTGL 571
            +AL   L+EE+ RD  V ++GE+V  Y G+YK++KGL +KYGD R+ DTPI E +  G+ +GAA+ GL
Sbjct:   38 DALNAALDEEIKRDDRVFLIGEEVAQYDGAYKISKGLWKKYGDGRIWDTPITEMAIAGLSVGAAMNGL 105          
BLAST of EY744261 vs. ExPASy Swiss-Prot
Match: ODPB_ACHLA (Pyruvate dehydrogenase E1 component subunit beta OS=Acholeplasma laidlawii GN=pdhB PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 3.293e-13
Identity = 32/73 (43.84%), Postives = 50/73 (68.49%), Query Frame = 2
Query:  356 LLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLTEKYGDLRVLDTPIAENSFTGMGIGAALTGLE 574
            + L EA+ + +++ M++D  + V GED G  GG ++VT GL +KYG+ RV DTPIAE++  G  +G A+ GL+
Sbjct:    4 ITLLEAINQAIDQAMEKDESIVVFGEDAGFEGGVFRVTAGLQKKYGETRVFDTPIAESAIVGSAVGMAINGLK 76          
BLAST of EY744261 vs. ExPASy Swiss-Prot
Match: ODBB_THET8 (2-oxoisovalerate dehydrogenase subunit beta OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=TTHA0230 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 7.337e-13
Identity = 35/72 (48.61%), Postives = 49/72 (68.06%), Query Frame = 2
Query:  356 LLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLTEKYGDLRVLDTPIAENSFTGMGIGAALTGL 571
            + + +AL   L+EEM +DP V V+GEDVG  GG + VT+GL +KYG  RV+DTP++E +  G  +G A  GL
Sbjct:    4 MTMVQALNRALDEEMAKDPRVVVLGEDVGKRGGVFLVTEGLLQKYGPDRVMDTPLSEAAIVGAALGMAAHGL 75          
BLAST of EY744261 vs. ExPASy Swiss-Prot
Match: ODBB_THET2 (2-oxoisovalerate dehydrogenase subunit beta OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=TT_C1756 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 7.337e-13
Identity = 35/72 (48.61%), Postives = 49/72 (68.06%), Query Frame = 2
Query:  356 LLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLTEKYGDLRVLDTPIAENSFTGMGIGAALTGL 571
            + + +AL   L+EEM +DP V V+GEDVG  GG + VT+GL +KYG  RV+DTP++E +  G  +G A  GL
Sbjct:    4 MTMVQALNRALDEEMAKDPRVVVLGEDVGKRGGVFLVTEGLLQKYGPDRVMDTPLSEAAIVGAALGMAAHGL 75          
BLAST of EY744261 vs. ExPASy Swiss-Prot
Match: ODPB_MYCGE (Pyruvate dehydrogenase E1 component subunit beta OS=Mycoplasma genitalium GN=pdhB PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 9.583e-13
Identity = 34/69 (49.28%), Postives = 48/69 (69.57%), Query Frame = 2
Query:  368 EALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLTEKYGDLRVLDTPIAENSFTGMGIGAALTGLE 574
            EAL   ++  ++RD +V + G+D G  GG ++ TKGL +KYG  RV D PIAENS  G+G+GAA+ GL+
Sbjct:   10 EALNNAMDLALERDQNVVLYGQDAGFEGGVFRATKGLQQKYGSERVWDCPIAENSMAGIGVGAAIGGLK 78          
BLAST of EY744261 vs. ExPASy Swiss-Prot
Match: ODPB_MYCPN (Pyruvate dehydrogenase E1 component subunit beta OS=Mycoplasma pneumoniae GN=pdhB PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.788e-12
Identity = 33/69 (47.83%), Postives = 49/69 (71.01%), Query Frame = 2
Query:  368 EALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLTEKYGDLRVLDTPIAENSFTGMGIGAALTGLE 574
            EAL   ++  ++RDP+V + G+D G  GG ++ TKGL +KYG+ RV D PIAE +  G+G+GAA+ GL+
Sbjct:   11 EALGNAMDLALERDPNVVLYGQDAGFEGGVFRATKGLQKKYGEERVWDCPIAEAAMAGIGVGAAIGGLK 79          
BLAST of EY744261 vs. ExPASy Swiss-Prot
Match: ODPB_STAES (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus epidermidis (strain ATCC 12228) GN=pdhB PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 8.112e-12
Identity = 31/72 (43.06%), Postives = 51/72 (70.83%), Query Frame = 2
Query:  353 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLTEKYGDLRVLDTPIAENSFTGMGIGAALTG 568
            ++ + +A+ + L+ E+ RD  V V GEDVG  GG ++VT+GL +++G+ RV DTP+AE+   G+ +G A+TG
Sbjct:    3 QMTMVQAINDALKSELKRDEDVLVFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLALGLAVTG 74          
BLAST of EY744261 vs. ExPASy Swiss-Prot
Match: ODPB_STAEQ (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=pdhB PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 8.112e-12
Identity = 31/72 (43.06%), Postives = 51/72 (70.83%), Query Frame = 2
Query:  353 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLTEKYGDLRVLDTPIAENSFTGMGIGAALTG 568
            ++ + +A+ + L+ E+ RD  V V GEDVG  GG ++VT+GL +++G+ RV DTP+AE+   G+ +G A+TG
Sbjct:    3 QMTMVQAINDALKSELKRDEDVLVFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLALGLAVTG 74          
BLAST of EY744261 vs. ExPASy Swiss-Prot
Match: ODPB_BACST (Pyruvate dehydrogenase E1 component subunit beta OS=Bacillus stearothermophilus GN=pdhB PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 6.867e-11
Identity = 30/72 (41.67%), Postives = 48/72 (66.67%), Query Frame = 2
Query:  353 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLTEKYGDLRVLDTPIAENSFTGMGIGAALTG 568
            ++ + +A+ + L  E+  DP+V + GEDVG  GG ++ T+GL  ++G+ RV DTP+AE+   G+ IG AL G
Sbjct:    3 QMTMVQAITDALRIELKNDPNVLIFGEDVGVNGGVFRATEGLQAEFGEDRVFDTPLAESGIGGLAIGLALQG 74          
BLAST of EY744261 vs. ExPASy Swiss-Prot
Match: ODPB_LEIXX (Pyruvate dehydrogenase E1 component subunit beta OS=Leifsonia xyli subsp. xyli GN=pdhB PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.969e-11
Identity = 32/71 (45.07%), Postives = 46/71 (64.79%), Query Frame = 2
Query:  356 LLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLTEKYGDLRVLDTPIAENSFTGMGIGAALTG 568
            L + +AL  GL + +  DP V ++GEDVG  GG ++VT+GL  ++G  RV+DTP+AE    G  IG A+ G
Sbjct:   17 LPMVKALNAGLRQALVADPKVLILGEDVGPLGGVFRVTEGLQSEFGASRVVDTPLAEAGIVGTAIGLAMRG 87          
The following BLAST results are available for this feature:
BLAST of EY744261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
ODPB_ASCSU1.931e-1350.00Pyruvate dehydrogenase E1 component subunit beta, ... [more]
ODPB_ACHLA3.293e-1343.84Pyruvate dehydrogenase E1 component subunit beta O... [more]
ODBB_THET87.337e-1348.612-oxoisovalerate dehydrogenase subunit beta OS=The... [more]
ODBB_THET27.337e-1348.612-oxoisovalerate dehydrogenase subunit beta OS=The... [more]
ODPB_MYCGE9.583e-1349.28Pyruvate dehydrogenase E1 component subunit beta O... [more]
ODPB_MYCPN2.788e-1247.83Pyruvate dehydrogenase E1 component subunit beta O... [more]
ODPB_STAES8.112e-1243.06Pyruvate dehydrogenase E1 component subunit beta O... [more]
ODPB_STAEQ8.112e-1243.06Pyruvate dehydrogenase E1 component subunit beta O... [more]
ODPB_BACST6.867e-1141.67Pyruvate dehydrogenase E1 component subunit beta O... [more]
ODPB_LEIXX8.969e-1145.07Pyruvate dehydrogenase E1 component subunit beta O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-F08-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744261 ID=EY744261; Name=EY744261; organism=Citrus sinensis; type=EST; length=1022bp
ATTTTAAACAAACATTCAATTTCTTTTCGCCATTTCCTTCTTTCAGTTAA
TAAGAAAAACCTCTCGCAGTTCTTCAAATCGAATCGAATCGAATCCAATG
GCTGCAATTTTCCTGGGCGTGGGAGCTGCAACGGCTTTATCACCGTCCAA
TTGCTTCGATTCTAAGAAGTTCCAGCTCTCAACTCGCAGATCTCTCTCAG
GACGGAAACCGTGGTTCTTAGTTGTCAGATCTGATGGAAGCGTCAACTTA
GGCTCGAATCAAAGATCCCGGAGGACTCAACAGTTGATCACTAATGCAGT
TGCAACGAAGGCTGATTCGGCAGCTTCTACTTCGGCATCAAAGCAAGGGC
ACGAACTTTTACTTTTTGAAGCTCTACGAGAAGGCTTGGAAGAAGAAATG
GACAGAGATCCACATGTATGTGTCATGGGTGAAGATGTTGGTCACTATGG
GGGTTCGTACAAAGTGACCAAAGGCCTGACTGAAAAGTATGGGGATCTCA
GGGTTCTTGACACCCCTATTGCTGAGAACTCTTTCACTGGTATGGGCATT
GGGGCTGCCCTGACTGGGCTTGAGGCCCAATTGTGGAAGGAATGAAAATG
GGGATTTCTTTCTTTAACCTTTCAACCATATTCTCCAACAACTTGAGGGT
ATGGCCCCACTATACTTCTGGTGGGGCAGGTTAACCCTCACAATAATTTA
TCCCTGGGACCTGGGTGGAATTTGGCCAAAAAACTGTGAACTGAAACCTT
CCCCAAGGCCCCTGAAGCCATAATTTTCCAATCAAACCCCCGGAAAAATA
AAATGGGGGGGCCAGGGTCCAAACCCCCATACAAATGGCCAAAGGGGTAT
TGGATAAAAAGACTTATCACCCCCCAAAAGGTAAGAAAACCCATTTTTTA
TCCCTTTTTTACAAAGAAGATGGGTTTTTGTCTTTAATTACACCCCCCAA
AAAGGAAAGAAGAGATATCCCCAAAACAAGAAGAAAAAAAAAATAATTTT
TTTTTTTAAAAAATTCTTGTGT
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