EY744251

Overview
NameEY744251
Unique NameEY744251
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length979
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744251 vs. ExPASy Swiss-Prot
Match: HIBCH_YEAST (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Saccharomyces cerevisiae GN=EHD3 PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 2.226e-19
Identity = 57/171 (33.33%), Postives = 86/171 (50.29%), Query Frame = 2
Query:  188 VLVEGRAKSRAAILNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGR--AFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGG------FVYLSHLPGYLGEYLALTGE 676
            VL   +  +R   LNRP  LNALN  M   + +    + ++     V++K + R  +FC+GGDV  +       +F     FF   Y   +   T++KP V  +DGITMG G G+S+   +R+ T+ T ++ PE  +GF PD G        V L++    +  YL LTGE
Sbjct:   39 VLFTVQDTARVITLNRPKKLNALNAEMSESMFKTLNEYAKSDTTNLVILKSSNRPRSFCAGGDVATVAIFNFNKEFAKSIKFFTDEYSLNFQIATYLKPIVTFMDGITMGGGVGLSIHTPFRIATENTKWAMPEMDIGFFPDVGSTFALPRIVTLANSNSQMALYLCLTGE 209          
BLAST of EY744251 vs. ExPASy Swiss-Prot
Match: ECHA8_MYCLE (Probable enoyl-CoA hydratase echA8 OS=Mycobacterium leprae GN=echA8 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.493e-11
Identity = 41/154 (26.62%), Postives = 73/154 (47.40%), Query Frame = 2
Query:  182 DQVLVEGRAKSRAAILNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGGFVYLSHLPG 643
            D +LV+G  +     LNRP  LNALN+ M+  +    +  + +PD+G +L+ G+ + F +G D+  +  L     F+   +FF    +   ++     P +A + G  +G G  +++     +  D   F  PE ++G  P  GG   L+   G
Sbjct:    4 DTILVDGYQRVGIITLNRPQALNALNSQMMNEITNAAKELDIDPDVGAILITGSPKVFAAGADIKEMASLTFTDAFD--ADFFSAWGKLAAVR----TPMIAAVAGYALGGGCELAMMCDLLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIG 151          
The following BLAST results are available for this feature:
BLAST of EY744251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
HIBCH_YEAST2.226e-1933.333-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
ECHA8_MYCLE6.493e-1126.62Probable enoyl-CoA hydratase echA8 OS=Mycobacteriu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-E10-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744251 ID=EY744251; Name=EY744251; organism=Citrus sinensis; type=EST; length=979bp
CCCACGCGTCCGCGAGACCAAGGCGCCTTCTTCAGCAAAATCCGAGCTTT
CAAGTGGAAAAATGCAGAGAATCAAATCTTTGTTAAGAATAAAGCATTCA
TTTAAACAAGTAGCGTTTGTGTCTCATCAACAGAGAAGCTTTTCTGCTTT
ACCGGATTACTCGTCAAATGATTATCTTCAAGACCAGGTCTTAGTTGAAG
GAAGAGCTAAGTCAAGAGCAGCTATTCTCAACAGACCCTCTAATCTGAAT
GCTCTTAATACTTCTATGGTGGGTAGGCTGAAGCGATTGTATGAATCATG
GGAAGAAAACCCGGACATTGGGTTCGTCTTGATGAAGGGCGCTGGCAGGG
CTTTCTGCTCTGGTGGGGATGTCATCGCTCTTTATCAGTTACTTAATGAA
GGAAAATTTGAAGACTTTAAAAATTTTTTTGAGACGTTATATCAGTTTGT
ATACCTTCAAGGAACATTTGTAAAGCCACATGTGGCTATATTGGATGGTA
TCACAATGGGATGTGGAGCTGGGATTTCGCTGCAGGGGATGTATCGTGTG
GTCACTGATAAAACTGTTTTTTCTAATCCAGAGACTCAAATGGGGTTCCA
TCCCGATGCAGGGGGCTTCGTTTATCTGTCTCACCTGCCCGGTTACTTAG
GAGAGTACTTGGCTCTAACTGGGGAAAAACCTCAATGGGGTAAAAATGAT
TGCTTGGTGGTCTTGGCCCCCATTAAACGTTAAATGGGGGTTCGTTAAAC
TGCACTTTAATTTTACTTTCCCCCCGGGTTTCCTTCCCTTTTTTTAATCC
TTCCAAAGGCAGCGAAAAATTTTTTTTTCTAAAGTCCCCCCGGAAAAAAA
ACTTTCCCCCGGGGTGTGGAGGAAAAAGGATGGGGAAAAATTTAACACCA
AAAAATGAATCTCTTCTAATCTCTAAAAAAAAAATTTTTTCTCTTGTGCC
CAAATAATTGGGGGGGGAACCCTTTTGTC
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