EY744241

Overview
NameEY744241
Unique NameEY744241
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length624
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY744241 vs. ExPASy Swiss-Prot
Match: RB11A_PIG (Ras-related protein Rab-11A OS=Sus scrofa GN=RAB11A PE=2 SV=3)

HSP 1 Score: 172.555 bits (436), Expect = 1.498e-42
Identity = 82/108 (75.93%), Postives = 96/108 (88.89%), Query Frame = 1 
Query:  301 MQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATH 624
            +QV+GKT+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K  T++NV RWL+ELRDHADSNIVIM+ GNKSDL HLRAV  ++  + AEK GLSF+ETSAL++T+
Sbjct:   53 IQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTN 160
[Close]
BLAST of EY744241 vs. ExPASy Swiss-Prot
Match: RB11A_MOUSE (Ras-related protein Rab-11A OS=Mus musculus GN=Rab11a PE=1 SV=3)

HSP 1 Score: 172.555 bits (436), Expect = 1.498e-42
Identity = 82/108 (75.93%), Postives = 96/108 (88.89%), Query Frame = 1 
Query:  301 MQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATH 624
            +QV+GKT+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K  T++NV RWL+ELRDHADSNIVIM+ GNKSDL HLRAV  ++  + AEK GLSF+ETSAL++T+
Sbjct:   53 IQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTN 160
[Close]
BLAST of EY744241 vs. ExPASy Swiss-Prot
Match: RB11A_HUMAN (Ras-related protein Rab-11A OS=Homo sapiens GN=RAB11A PE=1 SV=3)

HSP 1 Score: 172.555 bits (436), Expect = 1.498e-42
Identity = 82/108 (75.93%), Postives = 96/108 (88.89%), Query Frame = 1 
Query:  301 MQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATH 624
            +QV+GKT+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K  T++NV RWL+ELRDHADSNIVIM+ GNKSDL HLRAV  ++  + AEK GLSF+ETSAL++T+
Sbjct:   53 IQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTN 160
[Close]
BLAST of EY744241 vs. ExPASy Swiss-Prot
Match: RB11A_CHICK (Ras-related protein Rab-11A OS=Gallus gallus GN=RAB11A PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.498e-42
Identity = 82/108 (75.93%), Postives = 96/108 (88.89%), Query Frame = 1 
Query:  301 MQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATH 624
            +QV+GKT+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K  T++NV RWL+ELRDHADSNIVIM+ GNKSDL HLRAV  ++  + AEK GLSF+ETSAL++T+
Sbjct:   53 IQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTN 160
[Close]
BLAST of EY744241 vs. ExPASy Swiss-Prot
Match: RB11A_CANFA (Ras-related protein Rab-11A OS=Canis familiaris GN=RAB11A PE=2 SV=3)

HSP 1 Score: 172.555 bits (436), Expect = 1.498e-42
Identity = 82/108 (75.93%), Postives = 96/108 (88.89%), Query Frame = 1 
Query:  301 MQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATH 624
            +QV+GKT+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K  T++NV RWL+ELRDHADSNIVIM+ GNKSDL HLRAV  ++  + AEK GLSF+ETSAL++T+
Sbjct:   53 IQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTN 160
[Close]
BLAST of EY744241 vs. ExPASy Swiss-Prot
Match: RB11A_BOVIN (Ras-related protein Rab-11A OS=Bos taurus GN=RAB11A PE=2 SV=3)

HSP 1 Score: 171.4 bits (433), Expect = 3.336e-42
Identity = 82/108 (75.93%), Postives = 95/108 (87.96%), Query Frame = 1 
Query:  301 MQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATH 624
            +QV+GKT+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K  T++NV RWL+ELRDHADSNIVIM+ GNKSDL HLRAV  ++  + AEK GLSF+ETSAL+ T+
Sbjct:   53 IQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDYTN 160
[Close]
BLAST of EY744241 vs. ExPASy Swiss-Prot
Match: RB11B_RAT (Ras-related protein Rab-11B OS=Rattus norvegicus GN=Rab11b PE=2 SV=4)

HSP 1 Score: 170.244 bits (430), Expect = 7.433e-42
Identity = 81/108 (75.00%), Postives = 95/108 (87.96%), Query Frame = 1 
Query:  301 MQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATH 624
            +QV+GKT+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K  T++NV RWL+ELRDHADSNIVIM+ GNKSDL HLRAV  ++  + AEK  LSF+ETSAL++T+
Sbjct:   53 IQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTN 160
[Close]
BLAST of EY744241 vs. ExPASy Swiss-Prot
Match: RB11B_MOUSE (Ras-related protein Rab-11B OS=Mus musculus GN=Rab11b PE=1 SV=3)

HSP 1 Score: 170.244 bits (430), Expect = 7.433e-42
Identity = 81/108 (75.00%), Postives = 95/108 (87.96%), Query Frame = 1 
Query:  301 MQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATH 624
            +QV+GKT+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K  T++NV RWL+ELRDHADSNIVIM+ GNKSDL HLRAV  ++  + AEK  LSF+ETSAL++T+
Sbjct:   53 IQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTN 160
[Close]
BLAST of EY744241 vs. ExPASy Swiss-Prot
Match: RB11B_HUMAN (Ras-related protein Rab-11B OS=Homo sapiens GN=RAB11B PE=1 SV=4)

HSP 1 Score: 170.244 bits (430), Expect = 7.433e-42
Identity = 81/108 (75.00%), Postives = 95/108 (87.96%), Query Frame = 1 
Query:  301 MQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATH 624
            +QV+GKT+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K  T++NV RWL+ELRDHADSNIVIM+ GNKSDL HLRAV  ++  + AEK  LSF+ETSAL++T+
Sbjct:   53 IQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTN 160
[Close]
BLAST of EY744241 vs. ExPASy Swiss-Prot
Match: RB11B_BOVIN (Ras-related protein Rab-11B OS=Bos taurus GN=RAB11B PE=2 SV=3)

HSP 1 Score: 170.244 bits (430), Expect = 7.433e-42
Identity = 81/108 (75.00%), Postives = 95/108 (87.96%), Query Frame = 1 
Query:  301 MQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATH 624
            +QV+GKT+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K  T++NV RWL+ELRDHADSNIVIM+ GNKSDL HLRAV  ++  + AEK  LSF+ETSAL++T+
Sbjct:   53 IQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTN 160
The following BLAST results are available for this feature:
BLAST of EY744241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 401
Match NameE-valueIdentityDescription
RB11A_PIG1.498e-4275.93Ras-related protein Rab-11A OS=Sus scrofa GN=RAB11... [more]
RB11A_MOUSE1.498e-4275.93Ras-related protein Rab-11A OS=Mus musculus GN=Rab... [more]
RB11A_HUMAN1.498e-4275.93Ras-related protein Rab-11A OS=Homo sapiens GN=RAB... [more]
RB11A_CHICK1.498e-4275.93Ras-related protein Rab-11A OS=Gallus gallus GN=RA... [more]
RB11A_CANFA1.498e-4275.93Ras-related protein Rab-11A OS=Canis familiaris GN... [more]
RB11A_BOVIN3.336e-4275.93Ras-related protein Rab-11A OS=Bos taurus GN=RAB11... [more]
RB11B_RAT7.433e-4275.00Ras-related protein Rab-11B OS=Rattus norvegicus G... [more]
RB11B_MOUSE7.433e-4275.00Ras-related protein Rab-11B OS=Mus musculus GN=Rab... [more]
RB11B_HUMAN7.433e-4275.00Ras-related protein Rab-11B OS=Homo sapiens GN=RAB... [more]
RB11B_BOVIN7.433e-4275.00Ras-related protein Rab-11B OS=Bos taurus GN=RAB11... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-D12-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744241 ID=EY744241; Name=EY744241; organism=Citrus sinensis; type=EST; length=624bp
CCACGCGTCCGCAAATATAAATATTAAATAACTGTCTCCGGTACTCTGTC
AAATGAAGATCAATGAACACGATGAGCTGATCTTCTGATAAAGTGATTGA
CATGTTCCTTTGGTCACCCGAGTCCTCAAGAATTTACATCTTTCTTTTGT
GCCTAAGATGTATGGTTTGAGTTTTCTTTTGTGGATATAAGTTCCAACTA
GCATATAATTAAATATACTTGCTTCCTTAAATGTCGTTAATACTGTTGTG
GATAAATTGTTTGCACTCTGGATCTATGTGTAGCTAATATCTAATATTTG
ATGCAGGTAGAAGGGAAAACAGTTAAGGCACAGATTTGGGATACTGCAGG
CCAGGAGCGGTACCGAGCAATCACCAGTGCCTACTATAGAGGAGCAGTTG
GTGCACTCCTTGTCTATGATATAACCAAGAGGCAAACTTTTGACAATGTC
CTAAGGTGGCTTCGTGAATTGAGGGACCATGCAGATTCAAACATTGTCAT
AATGATGGCTGGAAATAAGTCGGACTTAAATCATCTGAGAGCTGTTACCG
AGGAGGATGGCCATTCTTTGGCTGAAAAAGAAGGTCTCTCATTTCTTGAG
ACATCAGCTTTGGAAGCAACCCAT
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