EY744241

Overview
NameEY744241
Unique NameEY744241
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length624
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744241 vs. ExPASy Swiss-Prot
Match: RB11B_DISOM (Ras-related protein Rab-11B OS=Discopyge ommata PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.656e-41
Identity = 80/108 (74.07%), Postives = 95/108 (87.96%), Query Frame = 1
Query:  301 MQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATH 624
            +QV+GKT+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K  T++NV RWL+ELRDHAD+NIVIM+ GNKSDL HLRAV  ++  + AEK  LSF+ETSAL++T+
Sbjct:   53 IQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTN 160          
BLAST of EY744241 vs. ExPASy Swiss-Prot
Match: RAA1B_ARATH (Ras-related protein RABA1b OS=Arabidopsis thaliana GN=RABA1B PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 4.818e-41
Identity = 80/108 (74.07%), Postives = 94/108 (87.04%), Query Frame = 1
Query:  301 MQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATH 624
            ++V+GK VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+R TF+NV RWL+EL++H D NIV+M+ GNKSDL HL AV  EDG S AE+E L F+ETSALEAT+
Sbjct:   55 LKVDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATN 162          
BLAST of EY744241 vs. ExPASy Swiss-Prot
Match: RB11D_LOTJA (Ras-related protein Rab11D OS=Lotus japonicus GN=RAB11D PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 6.292e-41
Identity = 80/108 (74.07%), Postives = 91/108 (84.26%), Query Frame = 1
Query:  301 MQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATH 624
            + V+ K VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+R TF+N  RWL+ELRDH D NIV+M+ GNKSDL HL AV  EDG S AE+E L F+ETSALEAT+
Sbjct:   55 LNVDAKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATN 162          
BLAST of EY744241 vs. ExPASy Swiss-Prot
Match: RIC2_ORYSJ (Ras-related protein RIC2 OS=Oryza sativa subsp. japonica GN=RIC2 PE=2 SV=2)

HSP 1 Score: 166.007 bits (419), Expect = 1.402e-40
Identity = 78/108 (72.22%), Postives = 93/108 (86.11%), Query Frame = 1
Query:  301 MQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATH 624
            +QV+GK VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+  TF+NV RWL+ELRDH D NIV+M+ GNKSDL HL AV  ++G + AE+E L F+ETSALE+T+
Sbjct:   56 LQVDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTN 163          
BLAST of EY744241 vs. ExPASy Swiss-Prot
Match: YPT3_NICPL (Ras-related protein YPT3 OS=Nicotiana plumbaginifolia GN=YPT3 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.550e-39
Identity = 75/108 (69.44%), Postives = 92/108 (85.19%), Query Frame = 1
Query:  301 MQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATH 624
            + ++ K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+  T++NV RWL+ELRDH D NIV+M+ GNKSDL HL AV+ ++   LAE+EGL F+ETSALEAT+
Sbjct:   55 LNIDNKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELRDHTDPNIVVMLIGNKSDLRHLVAVSTDEAKGLAEREGLYFMETSALEATN 162          
BLAST of EY744241 vs. ExPASy Swiss-Prot
Match: RB11E_LOTJA (Ras-related protein Rab11E OS=Lotus japonicus GN=RAB11E PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.024e-39
Identity = 76/108 (70.37%), Postives = 90/108 (83.33%), Query Frame = 1
Query:  301 MQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATH 624
            + ++GK +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+  TF+   RWL+ELRDH D NIV+M+ GNKSDL HL  V+ EDG + AEKE L F+ETSALEAT+
Sbjct:   55 LNIDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIVVMLIGNKSDLRHLVTVSTEDGKAFAEKESLYFMETSALEATN 162          
BLAST of EY744241 vs. ExPASy Swiss-Prot
Match: RGP1_ORYSJ (Ras-related protein RGP1 OS=Oryza sativa subsp. japonica GN=RGP1 PE=2 SV=2)

HSP 1 Score: 161.384 bits (407), Expect = 3.453e-39
Identity = 77/108 (71.30%), Postives = 90/108 (83.33%), Query Frame = 1
Query:  301 MQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATH 624
            + ++ +TVKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDITKRQ+FD+V RWL ELR HAD NIVIM+ GNKSDL  LR V  ED    AE+E L F+ETSALE+T+
Sbjct:   60 LHIDARTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDLGTLRVVPTEDAKEFAERENLFFMETSALESTN 167          
BLAST of EY744241 vs. ExPASy Swiss-Prot
Match: RB11D_TOBAC (Ras-related protein Rab11D OS=Nicotiana tabacum GN=RAB11D PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 3.453e-39
Identity = 78/108 (72.22%), Postives = 91/108 (84.26%), Query Frame = 1
Query:  301 MQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATH 624
            + ++ K+VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDITKRQTFD++ RWL ELR HAD NIVIM+ GNK+DL   RAV  ED    A+KEGL FLETSA+EAT+
Sbjct:   57 LAIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLIGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATN 164          
BLAST of EY744241 vs. ExPASy Swiss-Prot
Match: RB11C_TOBAC (Ras-related protein Rab11C OS=Nicotiana tabacum GN=RAB11C PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 4.509e-39
Identity = 78/105 (74.29%), Postives = 89/105 (84.76%), Query Frame = 1
Query:  307 VEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEAT 621
            ++ K+VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDITKRQTFD++ RWL ELR HAD NIVIM+ GNK+DL   RAV  ED    A+KEGL FLETSA+EAT
Sbjct:   59 IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLTGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEAT 163          
BLAST of EY744241 vs. ExPASy Swiss-Prot
Match: RB11A_LOTJA (Ras-related protein Rab11A OS=Lotus japonicus GN=RAB11A PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 4.509e-39
Identity = 79/106 (74.53%), Postives = 90/106 (84.91%), Query Frame = 1
Query:  307 VEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATH 624
            ++ KTVKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDITKRQTFD++ RWL ELR+HAD NIVI++ GNK DL + R V  ED    AEKEGL FLETSALEAT+
Sbjct:   61 IDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIGNKCDLVNQRDVPTEDAKEFAEKEGLFFLETSALEATN 166          
The following BLAST results are available for this feature:
BLAST of EY744241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 401
Match NameE-valueIdentityDescription
RB11B_DISOM1.656e-4174.07Ras-related protein Rab-11B OS=Discopyge ommata PE... [more]
RAA1B_ARATH4.818e-4174.07Ras-related protein RABA1b OS=Arabidopsis thaliana... [more]
RB11D_LOTJA6.292e-4174.07Ras-related protein Rab11D OS=Lotus japonicus GN=R... [more]
RIC2_ORYSJ1.402e-4072.22Ras-related protein RIC2 OS=Oryza sativa subsp. ja... [more]
YPT3_NICPL1.550e-3969.44Ras-related protein YPT3 OS=Nicotiana plumbaginifo... [more]
RB11E_LOTJA2.024e-3970.37Ras-related protein Rab11E OS=Lotus japonicus GN=R... [more]
RGP1_ORYSJ3.453e-3971.30Ras-related protein RGP1 OS=Oryza sativa subsp. ja... [more]
RB11D_TOBAC3.453e-3972.22Ras-related protein Rab11D OS=Nicotiana tabacum GN... [more]
RB11C_TOBAC4.509e-3974.29Ras-related protein Rab11C OS=Nicotiana tabacum GN... [more]
RB11A_LOTJA4.509e-3974.53Ras-related protein Rab11A OS=Lotus japonicus GN=R... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-D12-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744241 ID=EY744241; Name=EY744241; organism=Citrus sinensis; type=EST; length=624bp
CCACGCGTCCGCAAATATAAATATTAAATAACTGTCTCCGGTACTCTGTC
AAATGAAGATCAATGAACACGATGAGCTGATCTTCTGATAAAGTGATTGA
CATGTTCCTTTGGTCACCCGAGTCCTCAAGAATTTACATCTTTCTTTTGT
GCCTAAGATGTATGGTTTGAGTTTTCTTTTGTGGATATAAGTTCCAACTA
GCATATAATTAAATATACTTGCTTCCTTAAATGTCGTTAATACTGTTGTG
GATAAATTGTTTGCACTCTGGATCTATGTGTAGCTAATATCTAATATTTG
ATGCAGGTAGAAGGGAAAACAGTTAAGGCACAGATTTGGGATACTGCAGG
CCAGGAGCGGTACCGAGCAATCACCAGTGCCTACTATAGAGGAGCAGTTG
GTGCACTCCTTGTCTATGATATAACCAAGAGGCAAACTTTTGACAATGTC
CTAAGGTGGCTTCGTGAATTGAGGGACCATGCAGATTCAAACATTGTCAT
AATGATGGCTGGAAATAAGTCGGACTTAAATCATCTGAGAGCTGTTACCG
AGGAGGATGGCCATTCTTTGGCTGAAAAAGAAGGTCTCTCATTTCTTGAG
ACATCAGCTTTGGAAGCAACCCAT
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