EY744241

Overview
NameEY744241
Unique NameEY744241
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length624
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744241 vs. ExPASy Swiss-Prot
Match: RAA1C_ARATH (Ras-related protein RABA1c OS=Arabidopsis thaliana GN=RABA1C PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 5.889e-39
Identity = 77/108 (71.30%), Postives = 89/108 (82.41%), Query Frame = 1
Query:  301 MQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATH 624
            + V+ K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+  TF+NV  WL+ELR+H D NIV+M+ GNKSDL HL AV  ED  S AEKE L F+ETSALEAT+
Sbjct:   55 LNVDDKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATN 162          
BLAST of EY744241 vs. ExPASy Swiss-Prot
Match: RB11B_TOBAC (Ras-related protein Rab11B OS=Nicotiana tabacum GN=RAB11B PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.714e-38
Identity = 76/106 (71.70%), Postives = 90/106 (84.91%), Query Frame = 1
Query:  301 MQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEA 618
            ++V+ K VKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDIT+  TF+NV RWL+ELRDH D NIVIM+ GNK+DL HLRAV+ ED  + AE+E   F+ETSALE+
Sbjct:   56 IRVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVIMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALES 161          
BLAST of EY744241 vs. ExPASy Swiss-Prot
Match: YPT3_SCHPO (GTP-binding protein ypt3 OS=Schizosaccharomyces pombe GN=ypt3 PE=1 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.923e-38
Identity = 74/106 (69.81%), Postives = 93/106 (87.74%), Query Frame = 1
Query:  307 VEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATH 624
            ++ K +KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDITK+ +FDNV RWL+ELR+HADSNIVIM+ GNK+DL HLRAV+ E+  + A +  LSF+ETSA++A++
Sbjct:   54 LDNKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASN 159          
BLAST of EY744241 vs. ExPASy Swiss-Prot
Match: RAA1A_ARATH (Ras-related protein RABA1a OS=Arabidopsis thaliana GN=RABA1A PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.923e-38
Identity = 75/107 (70.09%), Postives = 88/107 (82.24%), Query Frame = 1
Query:  304 QVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATH 624
            +VEGK VKAQIWDTAGQERYRAITSAYYRGAVGALL+YD+T+  TF+N  RWLRELR H D NIV+M+ GNK DL HL AV  E+  + AE+E L F+ETSAL+AT+
Sbjct:   56 KVEGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATN 162          
BLAST of EY744241 vs. ExPASy Swiss-Prot
Match: ARA1_ARATH (Ras-related protein ARA-1 OS=Arabidopsis thaliana GN=ARA-1 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.604e-36
Identity = 71/108 (65.74%), Postives = 94/108 (87.04%), Query Frame = 1
Query:  301 MQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATH 624
            M++EGK VKAQIWDTAGQER+RA+TSAYYRGAVGAL+VYDIT+R TF++V RWL EL+ H+D+ +  M+ GNK DL ++RAV+ E+G +LAE+EGL F+ETSAL++T+
Sbjct:   54 MEIEGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVGNKCDLENIRAVSVEEGKALAEEEGLFFVETSALDSTN 161          
BLAST of EY744241 vs. ExPASy Swiss-Prot
Match: RB11A_DICDI (Ras-related protein Rab-11A OS=Dictyostelium discoideum GN=rab11A PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.040e-35
Identity = 70/108 (64.81%), Postives = 90/108 (83.33%), Query Frame = 1
Query:  301 MQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATH 624
            +Q EGKT+KAQ+WDTAGQERYRAITSAYYRGAVGALLVYDI K+ T+ +V RW+ ELR++AD NI IM+ GNKSDL HLR V+ ++    +EK  L+F+ETSAL++++
Sbjct:   55 IQTEGKTIKAQVWDTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWILELRENADRNIEIMLVGNKSDLRHLREVSTDEAKEFSEKHKLTFIETSALDSSN 162          
BLAST of EY744241 vs. ExPASy Swiss-Prot
Match: ARA4_ARATH (Ras-related protein ARA-4 OS=Arabidopsis thaliana GN=ARA-4 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.040e-35
Identity = 71/108 (65.74%), Postives = 89/108 (82.41%), Query Frame = 1
Query:  301 MQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATH 624
            M ++GK VKAQIWDTAGQER+RA+TSAYYRGAVGAL+VYDIT+  TF+NV RWL EL  H+D+ +  M+ GNK DL  +RAV+ E+G SLAE EGL F+ETSAL++T+
Sbjct:   54 MLIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKMLIGNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTN 161          
BLAST of EY744241 vs. ExPASy Swiss-Prot
Match: RAB25_RABIT (Ras-related protein Rab-25 OS=Oryctolagus cuniculus GN=RAB25 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.835e-32
Identity = 68/101 (67.33%), Postives = 81/101 (80.20%), Query Frame = 1
Query:  322 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATH 624
            VKAQIWDTAG ERYRAITSAYYRGAVGALLV+D+TK QT+  V RWL+EL DHA++ IV+M+ GNKSDL+  R V  E+    AE  GL FLETSAL++T+
Sbjct:   61 VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTN 161          
BLAST of EY744241 vs. ExPASy Swiss-Prot
Match: RAB25_HUMAN (Ras-related protein Rab-25 OS=Homo sapiens GN=RAB25 PE=1 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 1.835e-32
Identity = 68/101 (67.33%), Postives = 81/101 (80.20%), Query Frame = 1
Query:  322 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATH 624
            VKAQIWDTAG ERYRAITSAYYRGAVGALLV+D+TK QT+  V RWL+EL DHA++ IV+M+ GNKSDL+  R V  E+    AE  GL FLETSAL++T+
Sbjct:   61 VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTN 161          
BLAST of EY744241 vs. ExPASy Swiss-Prot
Match: YPT31_YEAST (GTP-binding protein YPT31/YPT8 OS=Saccharomyces cerevisiae GN=YPT31 PE=1 SV=3)

HSP 1 Score: 138.658 bits (348), Expect = 2.397e-32
Identity = 64/106 (60.38%), Postives = 84/106 (79.25%), Query Frame = 1
Query:  301 MQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEA 618
            ++++GK +KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDI+K  +++N   WL ELR++AD N+ + + GNKSDL HLRAV  E+  + A++  L F ETSAL +
Sbjct:   55 LEIDGKRIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKSDLAHLRAVPTEESKTFAQENQLLFTETSALNS 160          
The following BLAST results are available for this feature:
BLAST of EY744241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 401
Match NameE-valueIdentityDescription
RAA1C_ARATH5.889e-3971.30Ras-related protein RABA1c OS=Arabidopsis thaliana... [more]
RB11B_TOBAC1.714e-3871.70Ras-related protein Rab11B OS=Nicotiana tabacum GN... [more]
YPT3_SCHPO2.923e-3869.81GTP-binding protein ypt3 OS=Schizosaccharomyces po... [more]
RAA1A_ARATH2.923e-3870.09Ras-related protein RABA1a OS=Arabidopsis thaliana... [more]
ARA1_ARATH1.604e-3665.74Ras-related protein ARA-1 OS=Arabidopsis thaliana ... [more]
RB11A_DICDI1.040e-3564.81Ras-related protein Rab-11A OS=Dictyostelium disco... [more]
ARA4_ARATH1.040e-3565.74Ras-related protein ARA-4 OS=Arabidopsis thaliana ... [more]
RAB25_RABIT1.835e-3267.33Ras-related protein Rab-25 OS=Oryctolagus cuniculu... [more]
RAB25_HUMAN1.835e-3267.33Ras-related protein Rab-25 OS=Homo sapiens GN=RAB2... [more]
YPT31_YEAST2.397e-3260.38GTP-binding protein YPT31/YPT8 OS=Saccharomyces ce... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-D12-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744241 ID=EY744241; Name=EY744241; organism=Citrus sinensis; type=EST; length=624bp
CCACGCGTCCGCAAATATAAATATTAAATAACTGTCTCCGGTACTCTGTC
AAATGAAGATCAATGAACACGATGAGCTGATCTTCTGATAAAGTGATTGA
CATGTTCCTTTGGTCACCCGAGTCCTCAAGAATTTACATCTTTCTTTTGT
GCCTAAGATGTATGGTTTGAGTTTTCTTTTGTGGATATAAGTTCCAACTA
GCATATAATTAAATATACTTGCTTCCTTAAATGTCGTTAATACTGTTGTG
GATAAATTGTTTGCACTCTGGATCTATGTGTAGCTAATATCTAATATTTG
ATGCAGGTAGAAGGGAAAACAGTTAAGGCACAGATTTGGGATACTGCAGG
CCAGGAGCGGTACCGAGCAATCACCAGTGCCTACTATAGAGGAGCAGTTG
GTGCACTCCTTGTCTATGATATAACCAAGAGGCAAACTTTTGACAATGTC
CTAAGGTGGCTTCGTGAATTGAGGGACCATGCAGATTCAAACATTGTCAT
AATGATGGCTGGAAATAAGTCGGACTTAAATCATCTGAGAGCTGTTACCG
AGGAGGATGGCCATTCTTTGGCTGAAAAAGAAGGTCTCTCATTTCTTGAG
ACATCAGCTTTGGAAGCAACCCAT
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