EY744241

Overview
NameEY744241
Unique NameEY744241
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length624
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744241 vs. ExPASy Swiss-Prot
Match: RAB9B_HUMAN (Ras-related protein Rab-9B OS=Homo sapiens GN=RAB9B PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.844e-14
Identity = 41/112 (36.61%), Postives = 65/112 (58.04%), Query Frame = 1
Query:  301 MQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHAD----SNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATH 624
            ++V+G+ V  QIWDTAGQER++++ + +YRGA   LL + +  RQ+F+N+  W +E   +AD     +   ++ GNK D    +  TEE      E     +LETSA + T+
Sbjct:   49 LEVDGRFVTLQIWDTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVVLGNKVDKEDRQVTTEEAQTWCMENGDYPYLETSAKDDTN 160          
BLAST of EY744241 vs. ExPASy Swiss-Prot
Match: RAB6A_RAT (Ras-related protein Rab-6A (Fragment) OS=Rattus norvegicus GN=Rab6a PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.844e-14
Identity = 36/89 (40.45%), Postives = 59/89 (66.29%), Query Frame = 1
Query:  343 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSA 609
            TAGQER+R++  +Y R +  A++VYDIT   +F    +W+ ++R    S+++IM+ GNK+DL   R V+ E+G   A++  + F+ETSA
Sbjct:    1 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSA 89          
BLAST of EY744241 vs. ExPASy Swiss-Prot
Match: RYL2_YARLI (Ras-like GTP-binding protein RYL2 OS=Yarrowia lipolytica GN=RYL2 PE=3 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 6.557e-14
Identity = 36/74 (48.65%), Postives = 49/74 (66.22%), Query Frame = 1
Query:  307 VEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDL 528
            V   TV+ QIWDTAGQER+R++   YYR A   +L YD+T R +FD +  WL EL+ +  S+I+I + G K DL
Sbjct:   49 VNDTTVRLQIWDTAGQERFRSMAPIYYRSASCGILCYDVTSRASFDAMHLWLLELKQNLSSDIIIHIVGTKVDL 122          
BLAST of EY744241 vs. ExPASy Swiss-Prot
Match: RAS_EMENI (Ras-like protein OS=Emericella nidulans GN=AN0182 PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 6.557e-14
Identity = 40/102 (39.22%), Postives = 62/102 (60.78%), Query Frame = 1
Query:  307 VEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSN-IVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSA 609
            ++ +     + DTAGQE Y A+   Y R   G LLVY IT RQ+F+ ++ + +++    D +   I++ GNK DL+  R V+E++G SLA + G  F+ETSA
Sbjct:   51 IDDEVALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSITSRQSFEEIMTFQQQILRVKDKDYFPIIVVGNKCDLDKERVVSEQEGESLARQFGCKFIETSA 152          
BLAST of EY744241 vs. ExPASy Swiss-Prot
Match: RB33A_MOUSE (Ras-related protein Rab-33A OS=Mus musculus GN=Rab33a PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.118e-13
Identity = 39/105 (37.14%), Postives = 59/105 (56.19%), Query Frame = 1
Query:  301 MQVEGKTVKAQIWDTAGQERYR-AITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIV-IMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSA 609
            +++EG+ +K Q+WDTAGQER+R ++   YYR     + VYD+TK  +F N+  W++E   HA   +V  ++ GNK DL     V        A+   +   ETSA
Sbjct:   78 VEIEGEKIKVQVWDTAGQERFRKSMVEHYYRNVHAVVFVYDVTKMTSFTNLKMWIQECNGHAVPPLVPKVLVGNKCDLREQIQVPSNLALKFADAHNMLLFETSA 182          
BLAST of EY744241 vs. ExPASy Swiss-Prot
Match: RB33A_HUMAN (Ras-related protein Rab-33A OS=Homo sapiens GN=RAB33A PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.118e-13
Identity = 39/105 (37.14%), Postives = 59/105 (56.19%), Query Frame = 1
Query:  301 MQVEGKTVKAQIWDTAGQERYR-AITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIV-IMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSA 609
            +++EG+ +K Q+WDTAGQER+R ++   YYR     + VYD+TK  +F N+  W++E   HA   +V  ++ GNK DL     V        A+   +   ETSA
Sbjct:   78 VEIEGEKIKVQVWDTAGQERFRKSMVEHYYRNVHAVVFVYDVTKMTSFTNLKMWIQECNGHAVPPLVPKVLVGNKCDLREQIQVPSNLALKFADAHNMLLFETSA 182          
BLAST of EY744241 vs. ExPASy Swiss-Prot
Match: RAB7A_DICDI (Ras-related protein Rab-7A OS=Dictyostelium discoideum GN=rab7A PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.118e-13
Identity = 42/111 (37.84%), Postives = 65/111 (58.56%), Query Frame = 1
Query:  301 MQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHA----DSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEG-LSFLETSALEA 618
            + V+ + V  QIWDTAGQER++++  A+YRGA   +L YD+   +TF+N+  W  E    A      N   ++ GNK DL + R V+++   S  + +G + + ETSA EA
Sbjct:   50 LMVDDRVVTMQIWDTAGQERFQSLGVAFYRGADCCVLCYDVNVAKTFENLDSWRDEFLIQAGPRDPDNFPFVVLGNKIDLENQRVVSQKRAASWCQSKGNIPYFETSAKEA 160          
BLAST of EY744241 vs. ExPASy Swiss-Prot
Match: RAS_LACBI (Ras-like protein OS=Laccaria bicolor PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.908e-13
Identity = 39/102 (38.24%), Postives = 62/102 (60.78%), Query Frame = 1
Query:  307 VEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSN-IVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSA 609
            ++ +     + DTAGQE Y A+   Y R   G LLVY IT RQ+F+ ++ + +++    D +   I++ GNK DL+  R V++++G SLA + G  F+ETSA
Sbjct:   51 IDDEVALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSITSRQSFEEIMTFQQQILRVKDKDYFPIIVVGNKCDLDKERVVSKQEGESLARQFGCKFIETSA 152          
BLAST of EY744241 vs. ExPASy Swiss-Prot
Match: RAB9A_HUMAN (Ras-related protein Rab-9A OS=Homo sapiens GN=RAB9A PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.908e-13
Identity = 39/112 (34.82%), Postives = 64/112 (57.14%), Query Frame = 1
Query:  301 MQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHAD----SNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATH 624
            ++V+G  V  QIWDTAGQER+R++ + +YRG+   LL + +   Q+F N+  W +E   +AD     +   ++ GNK D++  +  TEE      +     + ETSA +AT+
Sbjct:   49 LEVDGHFVTMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKIDISERQVSTEEAQAWCRDNGDYPYFETSAKDATN 160          
BLAST of EY744241 vs. ExPASy Swiss-Prot
Match: RAB9A_CANFA (Ras-related protein Rab-9A OS=Canis familiaris GN=RAB9A PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 1.908e-13
Identity = 39/112 (34.82%), Postives = 64/112 (57.14%), Query Frame = 1
Query:  301 MQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHAD----SNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATH 624
            ++V+G  V  QIWDTAGQER+R++ + +YRG+   LL + +   Q+F N+  W +E   +AD     +   ++ GNK D++  +  TEE      +     + ETSA +AT+
Sbjct:   49 LEVDGHFVTMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKIDISERQVSTEEAQAWCRDNGDYPYFETSAKDATN 160          
The following BLAST results are available for this feature:
BLAST of EY744241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 401
Match NameE-valueIdentityDescription
RAB9B_HUMAN3.844e-1436.61Ras-related protein Rab-9B OS=Homo sapiens GN=RAB9... [more]
RAB6A_RAT3.844e-1440.45Ras-related protein Rab-6A (Fragment) OS=Rattus no... [more]
RYL2_YARLI6.557e-1448.65Ras-like GTP-binding protein RYL2 OS=Yarrowia lipo... [more]
RAS_EMENI6.557e-1439.22Ras-like protein OS=Emericella nidulans GN=AN0182 ... [more]
RB33A_MOUSE1.118e-1337.14Ras-related protein Rab-33A OS=Mus musculus GN=Rab... [more]
RB33A_HUMAN1.118e-1337.14Ras-related protein Rab-33A OS=Homo sapiens GN=RAB... [more]
RAB7A_DICDI1.118e-1337.84Ras-related protein Rab-7A OS=Dictyostelium discoi... [more]
RAS_LACBI1.908e-1338.24Ras-like protein OS=Laccaria bicolor PE=2 SV=1[more]
RAB9A_HUMAN1.908e-1334.82Ras-related protein Rab-9A OS=Homo sapiens GN=RAB9... [more]
RAB9A_CANFA1.908e-1334.82Ras-related protein Rab-9A OS=Canis familiaris GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-D12-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744241 ID=EY744241; Name=EY744241; organism=Citrus sinensis; type=EST; length=624bp
CCACGCGTCCGCAAATATAAATATTAAATAACTGTCTCCGGTACTCTGTC
AAATGAAGATCAATGAACACGATGAGCTGATCTTCTGATAAAGTGATTGA
CATGTTCCTTTGGTCACCCGAGTCCTCAAGAATTTACATCTTTCTTTTGT
GCCTAAGATGTATGGTTTGAGTTTTCTTTTGTGGATATAAGTTCCAACTA
GCATATAATTAAATATACTTGCTTCCTTAAATGTCGTTAATACTGTTGTG
GATAAATTGTTTGCACTCTGGATCTATGTGTAGCTAATATCTAATATTTG
ATGCAGGTAGAAGGGAAAACAGTTAAGGCACAGATTTGGGATACTGCAGG
CCAGGAGCGGTACCGAGCAATCACCAGTGCCTACTATAGAGGAGCAGTTG
GTGCACTCCTTGTCTATGATATAACCAAGAGGCAAACTTTTGACAATGTC
CTAAGGTGGCTTCGTGAATTGAGGGACCATGCAGATTCAAACATTGTCAT
AATGATGGCTGGAAATAAGTCGGACTTAAATCATCTGAGAGCTGTTACCG
AGGAGGATGGCCATTCTTTGGCTGAAAAAGAAGGTCTCTCATTTCTTGAG
ACATCAGCTTTGGAAGCAACCCAT
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