EY744241

Overview
NameEY744241
Unique NameEY744241
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length624
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744241 vs. ExPASy Swiss-Prot
Match: RAB4B_HUMAN (Ras-related protein Rab-4B OS=Homo sapiens GN=RAB4B PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.152e-26
Identity = 58/105 (55.24%), Postives = 77/105 (73.33%), Query Frame = 1
Query:  298 LMQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSAL 612
            ++ V GKTVK QIWDTAGQER+R++T +YYRGA GALLVYDIT R+T++++  WL + R  A  NIV+++ GNK DL+  R VT  +    A++  L FLETSAL
Sbjct:   49 VVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSAL 153          
BLAST of EY744241 vs. ExPASy Swiss-Prot
Match: RAB4B_CANFA (Ras-related protein Rab-4B OS=Canis familiaris GN=RAB4B PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.152e-26
Identity = 58/105 (55.24%), Postives = 77/105 (73.33%), Query Frame = 1
Query:  298 LMQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSAL 612
            ++ V GKTVK QIWDTAGQER+R++T +YYRGA GALLVYDIT R+T++++  WL + R  A  NIV+++ GNK DL+  R VT  +    A++  L FLETSAL
Sbjct:   49 VVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSAL 153          
BLAST of EY744241 vs. ExPASy Swiss-Prot
Match: RAB14_RAT (Ras-related protein Rab-14 OS=Rattus norvegicus GN=Rab14 PE=2 SV=3)

HSP 1 Score: 119.398 bits (298), Expect = 1.505e-26
Identity = 55/104 (52.88%), Postives = 77/104 (74.04%), Query Frame = 1
Query:  298 LMQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSA 609
            +++V G+ +K QIWDTAGQER+RA+T +YYRGA GAL+VYDIT+R T++++  WL + R+  + N VI++ GNK+DL   R VT E+    AE+ GL FLE SA
Sbjct:   52 IIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASA 155          
BLAST of EY744241 vs. ExPASy Swiss-Prot
Match: RAB14_PONAB (Ras-related protein Rab-14 OS=Pongo abelii GN=RAB14 PE=2 SV=3)

HSP 1 Score: 119.398 bits (298), Expect = 1.505e-26
Identity = 55/104 (52.88%), Postives = 77/104 (74.04%), Query Frame = 1
Query:  298 LMQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSA 609
            +++V G+ +K QIWDTAGQER+RA+T +YYRGA GAL+VYDIT+R T++++  WL + R+  + N VI++ GNK+DL   R VT E+    AE+ GL FLE SA
Sbjct:   52 IIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASA 155          
BLAST of EY744241 vs. ExPASy Swiss-Prot
Match: RAB14_PIG (Ras-related protein Rab-14 OS=Sus scrofa GN=RAB14 PE=2 SV=3)

HSP 1 Score: 119.398 bits (298), Expect = 1.505e-26
Identity = 55/104 (52.88%), Postives = 77/104 (74.04%), Query Frame = 1
Query:  298 LMQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSA 609
            +++V G+ +K QIWDTAGQER+RA+T +YYRGA GAL+VYDIT+R T++++  WL + R+  + N VI++ GNK+DL   R VT E+    AE+ GL FLE SA
Sbjct:   52 IIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASA 155          
BLAST of EY744241 vs. ExPASy Swiss-Prot
Match: RAB14_MOUSE (Ras-related protein Rab-14 OS=Mus musculus GN=Rab14 PE=1 SV=3)

HSP 1 Score: 119.398 bits (298), Expect = 1.505e-26
Identity = 55/104 (52.88%), Postives = 77/104 (74.04%), Query Frame = 1
Query:  298 LMQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSA 609
            +++V G+ +K QIWDTAGQER+RA+T +YYRGA GAL+VYDIT+R T++++  WL + R+  + N VI++ GNK+DL   R VT E+    AE+ GL FLE SA
Sbjct:   52 IIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASA 155          
BLAST of EY744241 vs. ExPASy Swiss-Prot
Match: RAB14_HUMAN (Ras-related protein Rab-14 OS=Homo sapiens GN=RAB14 PE=1 SV=4)

HSP 1 Score: 119.398 bits (298), Expect = 1.505e-26
Identity = 55/104 (52.88%), Postives = 77/104 (74.04%), Query Frame = 1
Query:  298 LMQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSA 609
            +++V G+ +K QIWDTAGQER+RA+T +YYRGA GAL+VYDIT+R T++++  WL + R+  + N VI++ GNK+DL   R VT E+    AE+ GL FLE SA
Sbjct:   52 IIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASA 155          
BLAST of EY744241 vs. ExPASy Swiss-Prot
Match: RAB14_CHICK (Ras-related protein Rab-14 OS=Gallus gallus GN=RAB14 PE=2 SV=3)

HSP 1 Score: 119.398 bits (298), Expect = 1.505e-26
Identity = 55/104 (52.88%), Postives = 77/104 (74.04%), Query Frame = 1
Query:  298 LMQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSA 609
            +++V G+ +K QIWDTAGQER+RA+T +YYRGA GAL+VYDIT+R T++++  WL + R+  + N VI++ GNK+DL   R VT E+    AE+ GL FLE SA
Sbjct:   52 IIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASA 155          
BLAST of EY744241 vs. ExPASy Swiss-Prot
Match: RAB8A_DICDI (Ras-related protein Rab-8A OS=Dictyostelium discoideum GN=rab8A PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.965e-26
Identity = 53/103 (51.46%), Postives = 74/103 (71.84%), Query Frame = 1
Query:  301 MQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSA 609
            +++EGK +K QIWDTAGQER+R IT+AYYRGA+G LLVYD+T  ++F N+  W+R +  HA  ++  M+ GNK D+   + V    G SLA++ G+ FLETSA
Sbjct:   57 IELEGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHATDSVNKMLIGNKCDMAEKKVVDSSRGKSLADEYGIKFLETSA 159          
BLAST of EY744241 vs. ExPASy Swiss-Prot
Match: RAB4B_DANRE (Ras-related protein Rab-4B OS=Danio rerio GN=rab4b PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.965e-26
Identity = 59/105 (56.19%), Postives = 76/105 (72.38%), Query Frame = 1
Query:  298 LMQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSAL 612
            ++ V GKTVK QIWDTAGQER+R++T +YYRGA GALLVYDIT R+T++ +  WL + R  A  NIVI++ GNK DL+  R VT  +    A++  L FLETSAL
Sbjct:   49 VVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARTLASPNIVIILCGNKKDLDADREVTFLEASRFAQENELMFLETSAL 153          
The following BLAST results are available for this feature:
BLAST of EY744241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 401
Match NameE-valueIdentityDescription
RAB4B_HUMAN1.152e-2655.24Ras-related protein Rab-4B OS=Homo sapiens GN=RAB4... [more]
RAB4B_CANFA1.152e-2655.24Ras-related protein Rab-4B OS=Canis familiaris GN=... [more]
RAB14_RAT1.505e-2652.88Ras-related protein Rab-14 OS=Rattus norvegicus GN... [more]
RAB14_PONAB1.505e-2652.88Ras-related protein Rab-14 OS=Pongo abelii GN=RAB1... [more]
RAB14_PIG1.505e-2652.88Ras-related protein Rab-14 OS=Sus scrofa GN=RAB14 ... [more]
RAB14_MOUSE1.505e-2652.88Ras-related protein Rab-14 OS=Mus musculus GN=Rab1... [more]
RAB14_HUMAN1.505e-2652.88Ras-related protein Rab-14 OS=Homo sapiens GN=RAB1... [more]
RAB14_CHICK1.505e-2652.88Ras-related protein Rab-14 OS=Gallus gallus GN=RAB... [more]
RAB8A_DICDI1.965e-2651.46Ras-related protein Rab-8A OS=Dictyostelium discoi... [more]
RAB4B_DANRE1.965e-2656.19Ras-related protein Rab-4B OS=Danio rerio GN=rab4b... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-D12-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744241 ID=EY744241; Name=EY744241; organism=Citrus sinensis; type=EST; length=624bp
CCACGCGTCCGCAAATATAAATATTAAATAACTGTCTCCGGTACTCTGTC
AAATGAAGATCAATGAACACGATGAGCTGATCTTCTGATAAAGTGATTGA
CATGTTCCTTTGGTCACCCGAGTCCTCAAGAATTTACATCTTTCTTTTGT
GCCTAAGATGTATGGTTTGAGTTTTCTTTTGTGGATATAAGTTCCAACTA
GCATATAATTAAATATACTTGCTTCCTTAAATGTCGTTAATACTGTTGTG
GATAAATTGTTTGCACTCTGGATCTATGTGTAGCTAATATCTAATATTTG
ATGCAGGTAGAAGGGAAAACAGTTAAGGCACAGATTTGGGATACTGCAGG
CCAGGAGCGGTACCGAGCAATCACCAGTGCCTACTATAGAGGAGCAGTTG
GTGCACTCCTTGTCTATGATATAACCAAGAGGCAAACTTTTGACAATGTC
CTAAGGTGGCTTCGTGAATTGAGGGACCATGCAGATTCAAACATTGTCAT
AATGATGGCTGGAAATAAGTCGGACTTAAATCATCTGAGAGCTGTTACCG
AGGAGGATGGCCATTCTTTGGCTGAAAAAGAAGGTCTCTCATTTCTTGAG
ACATCAGCTTTGGAAGCAACCCAT
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