EY744236

Overview
NameEY744236
Unique NameEY744236
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length896
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744236 vs. ExPASy Swiss-Prot
Match: NIP12_ORYSJ (Aquaporin NIP1-2 OS=Oryza sativa subsp. japonica GN=NIP1-2 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.329e-11
Identity = 54/189 (28.57%), Postives = 82/189 (43.39%), Query Frame = 3
Query:   90 GIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGAN------ELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGATIAAF 638
            GI   +G ++ VLVY  + ISG H NPAVT       +    +   Y+VAQ LG+     +     +  +   GGGA             S     A E + +F L++ V       R+     +  LA L +G  V +  L   P+TG  +NPARSLG A++  +   +   W++   P  G    A+
Sbjct:   98 GICAVWGLVVMVLVYTVSHISGAHFNPAVTVAFATCGRFRWKQVPSYVVAQVLGST----MASLTLRVVFGGGGGGARGEHLFFGTTPAGSMAQAAALEFVISFFLMFVVSGVATDNRA-----IGELAGLAVGATVAVNVLFAGPVTGASMNPARSLGPAMVAGR---YGGVWVYVAAPVSGTVCGAW 274          
BLAST of EY744236 vs. ExPASy Swiss-Prot
Match: GLPF_SHIFL (Glycerol uptake facilitator protein OS=Shigella flexneri GN=glpF PE=3 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 4.348e-11
Identity = 59/216 (27.31%), Postives = 94/216 (43.52%), Query Frame = 3
Query:   87 LGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKA--------FQKSYYTRYGGGAN-ELADGYST--------GVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQW------------LFWV---GPFIGATIAAF 638
            + + W  G  + + +Y TAG+SG H+NPAVT  L+L       + + ++V+Q  GA     LV          F+++++   G   + +LA  +ST            A E++ T +L+  + + TD            LAPL IG  + ++  +  P+TG  +NPAR  G  V      AW   W             F V    P +GA + AF
Sbjct:   44 ISVIWGLG--VAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLILALTDDGNGVPRG---PLAPLLIGLLIAVIGASMGPLTGFAMNPARDFGPKVF-----AWLAGWGNVAFTGGRDIPYFLVPLFSPIVGAIVGAF 249          
BLAST of EY744236 vs. ExPASy Swiss-Prot
Match: GLPF_PSEAE (Glycerol uptake facilitator protein OS=Pseudomonas aeruginosa GN=glpF PE=3 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 4.348e-11
Identity = 50/175 (28.57%), Postives = 76/175 (43.43%), Query Frame = 3
Query:   75 GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGAN---------ELADGYST--------GVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLG 548
            G+  + I W  G  + + +Y +AG+SG H+NPAV+  L+L       +   Y+ AQ  GA     LV     S +  +    N          LA  +ST        G     E++ T +L+  + + TD            LAPL IG  + ++  A  P+TG  +NPAR  G
Sbjct:   43 GLWEISIIWGVG--VSMAIYLSAGVSGAHLNPAVSIALWLFAGFEGRKLPFYITAQVAGAFCAAALVYTLYSSLFIEFEQAQNIVRGSQDSLALASVFSTYPHPALSVGQAFLVEVVITAILMAVIMALTDDGNGLPRG---PLAPLLIGLLIAVIGSAMGPLTGFAMNPARDFG 212          
BLAST of EY744236 vs. ExPASy Swiss-Prot
Match: AQP9_HUMAN (Aquaporin-9 OS=Homo sapiens GN=AQP9 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.348e-11
Identity = 57/219 (26.03%), Postives = 91/219 (41.55%), Query Frame = 3
Query:   81 GILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGG--------------ANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVP-VLAPLPIGFAVFMVHLATIPITGTGINPARSL-----------GAAVIYNKDKAWDDQWLFWVGPFIGATIAAFLPPIPLE 659
            G++ I   F   + + +Y   G+SGGHINPAV+  + L  ++   +   Y+ AQ LGA  G   V          + GG              A   A   S     A +++ T +L+  VF+  D    +R+   P  L P+ IG  + ++  +    +G  +NPAR L           G  V    +  W   W+  VGP +GA I   +  + +E
Sbjct:   56 GVITINVGFSMAVAMAIYVAGGVSGGHINPAVSLAMCLFGRMKWFKLPFYVGAQFLGAFVGAATVFGIYYDGLMSFAGGKLLIVGENATAHIFATYPAPYLSLANAFADQVVATMILLIIVFAIFD----SRNLGAPRGLEPIAIGLLIIVIASSLGLNSGCAMNPARDLSPRLFTALAGWGFEVFRAGNNFW---WIPVVGPLVGAVIGGLIYVLVIE 267          
BLAST of EY744236 vs. ExPASy Swiss-Prot
Match: YI7H_SCHPO (Uncharacterized membrane protein C977.17 OS=Schizosaccharomyces pombe GN=SPAC977.17 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.416e-11
Identity = 63/213 (29.58%), Postives = 83/213 (38.97%), Query Frame = 3
Query:   12 VLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAA--------------EIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVG 608
            VL V G  S                L  AW FG M+ V  Y   GISGGH+NPAVT  L + RK    +  +Y+  Q  GA  G  L   +  S  T + GG +      +TG  L                E IGT VLV  +F+  D   S     +       +G  +  + +A    T   +NPAR LG  +      AW      W+G
Sbjct:  322 VLVVFGVGSNLQATVTNGAGGSFESLSFAWGFGCMLGV--YIAGGISGGHVNPAVTISLAIFRKFPWYKVPIYIFFQIWGAFFGGALAYGYHWSSITEFEGGKDIRTP--ATGGCLYTNPKPYVTWRNAFFDEFIGTAVLVGCLFAILDDTNSPPTQGMTAFI---VGLLIAAIGMALGYQTSFTLNPARDLGPRMF-----AW------WIG 516          
BLAST of EY744236 vs. ExPASy Swiss-Prot
Match: SIP11_ORYSJ (Aquaporin SIP1-1 OS=Oryza sativa subsp. japonica GN=SIP1-1 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 7.416e-11
Identity = 48/191 (25.13%), Postives = 77/191 (40.31%), Query Frame = 3
Query:  114 MIFVLVYCTAGISGGHINPAV-----TFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGATIAA------FLPPIP 653
            ++F        + G   NP         GL   R  SL    +   AQ  GA+ G   +       Y    GG +   D ++   G AAE++ TFV+   V          +    P++    +  +   + L     TG  +NPA + G A + N+   W+  +++W+ PF+GA +AA      F PP P
Sbjct:   57 LLFAFNLLCDALGGASFNPTALAAFHAAGLSSPRHSSLFPLALRFPAQAAGAVGGAMAISELMPEQYKHMLGGPSLKVDLHT---GAAAELVLTFVITLAVLWII-----VKGPRNPIVKTWMLSISTVCLVLTGAAYTGPSMNPANAFGWAYVNNRHNTWEQFYVYWICPFVGAVLAAWVFRAVFPPPAP 239          
The following BLAST results are available for this feature:
BLAST of EY744236 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 196
Match NameE-valueIdentityDescription
NIP12_ORYSJ3.329e-1128.57Aquaporin NIP1-2 OS=Oryza sativa subsp. japonica G... [more]
GLPF_SHIFL4.348e-1127.31Glycerol uptake facilitator protein OS=Shigella fl... [more]
GLPF_PSEAE4.348e-1128.57Glycerol uptake facilitator protein OS=Pseudomonas... [more]
AQP9_HUMAN4.348e-1126.03Aquaporin-9 OS=Homo sapiens GN=AQP9 PE=1 SV=1[more]
YI7H_SCHPO7.416e-1129.58Uncharacterized membrane protein C977.17 OS=Schizo... [more]
SIP11_ORYSJ7.416e-1125.13Aquaporin SIP1-1 OS=Oryza sativa subsp. japonica G... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-D07-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744236 ID=EY744236; Name=EY744236; organism=Citrus sinensis; type=EST; length=896bp
ACACGCGTCCGGTCTTGACTGTCATTGGCTACAAAAGCCAGACCGATCCC
GCCAAGAACGTCGACGGCTGTGCCGGCGTCGGCATCCTCGGTATCGCCTG
GGCCTTCGGTGGCATGATCTTTGTCCTCGTTTACTGCACCGCCGGTATCT
CAGGTGGTCACATTAACCCGGCAGTGACGTTCGGACTATTCTTGGCCCGC
AAGGTGTCGTTGGTCCGTGCTGTGATGTACATGGTGGCGCAGTGCCTTGG
TGCAATCTCCGGTGTTGGGTTGGTCAAGGCTTTCCAAAAATCTTACTACA
CAAGGTACGGAGGTGGGGCCAACGAGCTGGCCGATGGGTACAGCACAGGC
GTTGGATTGGCCGCCGAGATCATCGGCACCTTTGTGTTGGTTTACACTGT
CTTCTCGGCCACTGATCCCAAGAGAAGCGCCAGAGACTCCCATGTCCCCG
TTTTGGCACCGCTCCCCATTGGATTTGCTGTGTTCATGGTACACTTGGCC
ACAATCCCAATCACTGGCACTGGCATTAACCCAGCAAGGAGTCTCGGGGC
CGCTGTTATTTACAACAAGGACAAGGCTTGGGATGATCAATGGCTCTTCT
GGGTTGGACCCTTCATCGGTGCAACAATTGCGGCTTTTCTACCACCAATT
CCTCTTGAGAGCTGGGACCTGTCAAGGCTCTTGGTTCCTTCCAGGAACCA
ATCCCCTGGTCTAAATTTAGTTTCAAACAAGGGAATTAACCCCAATCCTT
CCTGGGGGTTAAAGGATTTTAAAATGGGAAAAAAAAAAAACGGGGAAAGG
AAATAAAAGGGGGGTTAAATTTTCAAAAAAGTGAAATAAGGAGGGGGGGG
GGGGGGATTTGGGTGTTTTTCAAAGGAAATTTGTAGGCAAAAAAAT
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