EY744234

Overview
NameEY744234
Unique NameEY744234
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length476
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744234 vs. ExPASy Swiss-Prot
Match: H2B7_ARATH (Histone H2B.7 OS=Arabidopsis thaliana GN=At3g46030 PE=1 SV=3)

HSP 1 Score: 167.548 bits (423), Expect = 2.613e-41
Identity = 85/89 (95.51%), Postives = 88/89 (98.88%), Query Frame = 2
Query:   11 ETVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 277
            ++VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESS+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK
Sbjct:   53 KSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 141          
BLAST of EY744234 vs. ExPASy Swiss-Prot
Match: H2B6_ARATH (Histone H2B.6 OS=Arabidopsis thaliana GN=H2B PE=1 SV=3)

HSP 1 Score: 167.548 bits (423), Expect = 2.613e-41
Identity = 85/89 (95.51%), Postives = 88/89 (98.88%), Query Frame = 2
Query:   11 ETVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 277
            ++VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESS+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK
Sbjct:   58 KSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 146          
BLAST of EY744234 vs. ExPASy Swiss-Prot
Match: H2B2_MEDTR (Probable histone H2B.2 OS=Medicago truncatula PE=3 SV=3)

HSP 1 Score: 167.162 bits (422), Expect = 3.412e-41
Identity = 85/91 (93.41%), Postives = 88/91 (96.70%), Query Frame = 2
Query:    5 ASETVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 277
            + ++VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKL QESSRLARYNKKPTITSREIQTAVRLVLPGELAKH VSEGTKAVTK
Sbjct:   54 SKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLTQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHDVSEGTKAVTK 144          
BLAST of EY744234 vs. ExPASy Swiss-Prot
Match: H2B3_ARATH (Histone H2B.3 OS=Arabidopsis thaliana GN=At2g28720 PE=1 SV=3)

HSP 1 Score: 166.777 bits (421), Expect = 4.457e-41
Identity = 84/89 (94.38%), Postives = 88/89 (98.88%), Query Frame = 2
Query:   11 ETVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 277
            ++ ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK
Sbjct:   59 KSTETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 147          
BLAST of EY744234 vs. ExPASy Swiss-Prot
Match: H2B1_SOLLC (Histone H2B.1 OS=Solanum lycopersicum GN=H2B-1 PE=2 SV=4)

HSP 1 Score: 166.777 bits (421), Expect = 4.457e-41
Identity = 85/91 (93.41%), Postives = 89/91 (97.80%), Query Frame = 2
Query:    5 ASETVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 277
            + ++VETYKIYIFKVLKQVHPDIGISSK+MGIMNSFINDIFEKLAQESSRLAR NKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK
Sbjct:   48 SKKSVETYKIYIFKVLKQVHPDIGISSKSMGIMNSFINDIFEKLAQESSRLARINKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 138          
BLAST of EY744234 vs. ExPASy Swiss-Prot
Match: H2B10_ARATH (Histone H2B.10 OS=Arabidopsis thaliana GN=At5g22880 PE=1 SV=3)

HSP 1 Score: 166.777 bits (421), Expect = 4.457e-41
Identity = 85/91 (93.41%), Postives = 88/91 (96.70%), Query Frame = 2
Query:    5 ASETVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 277
            + + VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESS+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK
Sbjct:   51 SKKNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAGESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 141          
BLAST of EY744234 vs. ExPASy Swiss-Prot
Match: H2B2_SOLLC (Histone H2B.2 OS=Solanum lycopersicum GN=H2B-2 PE=2 SV=2)

HSP 1 Score: 166.392 bits (420), Expect = 5.821e-41
Identity = 84/91 (92.31%), Postives = 89/91 (97.80%), Query Frame = 2
Query:    5 ASETVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 277
            + +++ETYKIYIFKVLKQVHPDIGISSK+MGIMNSFINDIFEKLAQESSRLAR NKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK
Sbjct:   46 SKKSIETYKIYIFKVLKQVHPDIGISSKSMGIMNSFINDIFEKLAQESSRLARINKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 136          
BLAST of EY744234 vs. ExPASy Swiss-Prot
Match: H2B1_ORYSJ (Histone H2B.1 OS=Oryza sativa subsp. japonica GN=H2B1 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 5.821e-41
Identity = 84/91 (92.31%), Postives = 89/91 (97.80%), Query Frame = 2
Query:    5 ASETVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 277
            A ++VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQE++RLARYNKKPTITSREIQT+VRLVLPGELAKHAVSEGTKAVTK
Sbjct:   58 AKKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQEAARLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTK 148          
BLAST of EY744234 vs. ExPASy Swiss-Prot
Match: H2B1_ORYSI (Histone H2B.1 OS=Oryza sativa subsp. indica GN=OsI_010709 PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 5.821e-41
Identity = 84/91 (92.31%), Postives = 89/91 (97.80%), Query Frame = 2
Query:    5 ASETVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 277
            A ++VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQE++RLARYNKKPTITSREIQT+VRLVLPGELAKHAVSEGTKAVTK
Sbjct:   58 AKKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQEAARLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTK 148          
BLAST of EY744234 vs. ExPASy Swiss-Prot
Match: H2B11_ORYSJ (Histone H2B.11 OS=Oryza sativa subsp. japonica GN=H2B.11 PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 5.821e-41
Identity = 84/91 (92.31%), Postives = 89/91 (97.80%), Query Frame = 2
Query:    5 ASETVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 277
            A ++VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQE++RLARYNKKPTITSREIQT+VRLVLPGELAKHAVSEGTKAVTK
Sbjct:   45 AKKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQEAARLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTK 135          
The following BLAST results are available for this feature:
BLAST of EY744234 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 205
Match NameE-valueIdentityDescription
H2B7_ARATH2.613e-4195.51Histone H2B.7 OS=Arabidopsis thaliana GN=At3g46030... [more]
H2B6_ARATH2.613e-4195.51Histone H2B.6 OS=Arabidopsis thaliana GN=H2B PE=1 ... [more]
H2B2_MEDTR3.412e-4193.41Probable histone H2B.2 OS=Medicago truncatula PE=3... [more]
H2B3_ARATH4.457e-4194.38Histone H2B.3 OS=Arabidopsis thaliana GN=At2g28720... [more]
H2B1_SOLLC4.457e-4193.41Histone H2B.1 OS=Solanum lycopersicum GN=H2B-1 PE=... [more]
H2B10_ARATH4.457e-4193.41Histone H2B.10 OS=Arabidopsis thaliana GN=At5g2288... [more]
H2B2_SOLLC5.821e-4192.31Histone H2B.2 OS=Solanum lycopersicum GN=H2B-2 PE=... [more]
H2B1_ORYSJ5.821e-4192.31Histone H2B.1 OS=Oryza sativa subsp. japonica GN=H... [more]
H2B1_ORYSI5.821e-4192.31Histone H2B.1 OS=Oryza sativa subsp. indica GN=OsI... [more]
H2B11_ORYSJ5.821e-4192.31Histone H2B.11 OS=Oryza sativa subsp. japonica GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-D05-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744234 ID=EY744234; Name=EY744234; organism=Citrus sinensis; type=EST; length=476bp
CCACGCGTCCGAGACCGTGGAGACCTACAAGATCTACATATTCAAGGTGC
TGAAGCAGGTGCATCCTGACATAGGAATCTCCAGCAAGGCCATGGGTATC
ATGAACAGCTTTATCAACGATATCTTCGAGAAATTGGCTCAGGAGTCGTC
TCGTCTCGCGAGATACAACAAGAAGCCCACTATCACTTCTCGTGAGATCC
AGACTGCTGTTAGACTTGTCTTGCCCGGTGAGCTTGCCAAGCATGCCGTT
TCTGAAGGCACTAAGGCTGTCACTAAGTTTACTAGCTCTTAATGAACCTA
TAGCTTCAATAATTCAATTAGTATCTTCTCTTTCTAGCTTGGGCTCTGCA
ATTTTTAAGGTCCTGTTTCTTTTATTTTCCTTTTGGTTGTAGATTTTCTC
TTTTGTTTACTTTTTGTATCTACCCTACCCAACAACCTAATCGAAGTTCT
TTTTGCTCAAAAAAAAAAAAAAAAAA
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