EY744234
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744234 vs. ExPASy Swiss-Prot
Match: H2BWT_HUMAN (Histone H2B type W-T OS=Homo sapiens GN=H2BFWT PE=1 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 1.306e-16 Identity = 41/92 (44.57%), Postives = 66/92 (71.74%), Query Frame = 2 Query: 2 HASETVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 277 H++ +++ Y +VLKQVH + +S +A+ +M+S ++DI +++A E+ RLAR K+ TIT+ E + AVRL+LPG++ K A SEGTKAV + Sbjct: 73 HSNCRGDSFATYFRRVLKQVHQGLSLSREAVSVMDSLVHDILDRIATEAGRLARSTKRQTITAWETRMAVRLLLPGQMGKLAESEGTKAVLR 164
BLAST of EY744234 vs. ExPASy Swiss-Prot
Match: H2BFM_HUMAN (Histone H2B type F-M OS=Homo sapiens GN=H2BFM PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.909e-16 Identity = 39/86 (45.35%), Postives = 63/86 (73.26%), Query Frame = 2 Query: 20 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 277 +++ Y +VLKQVH + +S +A+ +M+S I+DI +++A E+ +LA Y K+ TITSR+IQ AVRL+LPG++ K A ++GT A + Sbjct: 161 DSFTPYFPRVLKQVHQGLSLSQEAVSVMDSMIHDILDRIATEAGQLAHYTKRVTITSRDIQMAVRLLLPGKMGKLAEAQGTNAALR 246
BLAST of EY744234 vs. ExPASy Swiss-Prot
Match: H2BV_BOVIN (Histone H2B subacrosomal variant OS=Bos taurus GN=SUBH2BV PE=1 SV=3) HSP 1 Score: 80.1073 bits (196), Expect = 5.486e-15 Identity = 39/87 (44.83%), Postives = 62/87 (71.26%), Query Frame = 2 Query: 17 VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 277 + Y +YI +VLK+V P GISS+ + I+N+ IND+FE+++ E+ L Y K+ T+T +I+ AV L+LP +LAK+AV+ G +AV + Sbjct: 32 LRNYSLYINRVLKEVVPQKGISSRTIDIINTMINDMFERISTEACNLMYYRKRCTLTPEDIEKAVYLLLPEKLAKYAVAFGKEAVQR 118
BLAST of EY744234 vs. ExPASy Swiss-Prot
Match: H2BV_MOUSE (Histone H2B subacrosomal variant OS=Mus musculus GN=Subh2bv PE=1 SV=3) HSP 1 Score: 75.0998 bits (183), Expect = 1.765e-13 Identity = 41/82 (50.00%), Postives = 58/82 (70.73%), Query Frame = 2 Query: 26 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 271 Y +YI +VLK+V P+ GISS ++ IMN INDIFE++A E+ + K+ T+T +IQ AV L+LP +LA AV+ G+KAV Sbjct: 36 YSLYINRVLKEVVPNRGISSYSVDIMNILINDIFERIATEACQQMFLRKRCTLTPGDIQQAVHLLLPKKLATLAVTFGSKAV 117
BLAST of EY744234 vs. ExPASy Swiss-Prot
Match: H2BV1_DICDI (Histone H2B.v1 OS=Dictyostelium discoideum GN=H2Bv1 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 7.415e-12 Identity = 34/81 (41.98%), Postives = 54/81 (66.67%), Query Frame = 2 Query: 32 IYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVT 274 IYI K++KQ++P I K++ I+ S I D + E+ L + + K T+++R++QT+VRL GE+++HAVSEG K VT Sbjct: 18 IYIKKLIKQINPACRIQVKSVQILTSLIRDTTISIMNEAFHLVQLSNKRTLSARDVQTSVRLCTVGEISRHAVSEGVKRVT 98 The following BLAST results are available for this feature:
BLAST of EY744234 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 205
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Sequences
The
following sequences are available for this feature:
EST sequence >EY744234 ID=EY744234; Name=EY744234; organism=Citrus sinensis; type=EST; length=476bpback to top |