EY744227

Overview
NameEY744227
Unique NameEY744227
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length913
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY744227 vs. ExPASy Swiss-Prot
Match: UBIQ_RABIT (Ubiquitin OS=Oryctolagus cuniculus PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.174e-33
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 1 
Query:   34 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGILPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 261
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGI PDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY744227 vs. ExPASy Swiss-Prot
Match: UBIQ_PONPY (Ubiquitin OS=Pongo pygmaeus GN=UBA52 PE=3 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 4.174e-33
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 1 
Query:   34 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGILPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 261
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGI PDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY744227 vs. ExPASy Swiss-Prot
Match: UBIQ_PLUXY (Ubiquitin OS=Plutella xylostella PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.174e-33
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 1 
Query:   34 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGILPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 261
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGI PDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY744227 vs. ExPASy Swiss-Prot
Match: UBIQ_PIG (Ubiquitin OS=Sus scrofa GN=UBA52 PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.174e-33
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 1 
Query:   34 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGILPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 261
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGI PDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY744227 vs. ExPASy Swiss-Prot
Match: UBIQ_PANTR (Ubiquitin OS=Pan troglodytes GN=UBB PE=1 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 4.174e-33
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 1 
Query:   34 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGILPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 261
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGI PDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY744227 vs. ExPASy Swiss-Prot
Match: UBIQ_OPHHA (Ubiquitin OS=Ophiophagus hannah PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.174e-33
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 1 
Query:   34 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGILPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 261
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGI PDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY744227 vs. ExPASy Swiss-Prot
Match: UBIQ_MOUSE (Ubiquitin OS=Mus musculus GN=Rps27a PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.174e-33
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 1 
Query:   34 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGILPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 261
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGI PDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY744227 vs. ExPASy Swiss-Prot
Match: UBIQ_MANSE (Ubiquitin OS=Manduca sexta PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.174e-33
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 1 
Query:   34 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGILPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 261
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGI PDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY744227 vs. ExPASy Swiss-Prot
Match: UBIQ_MACFA (Ubiquitin OS=Macaca fascicularis GN=UBA52 PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.174e-33
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 1 
Query:   34 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGILPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 261
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGI PDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY744227 vs. ExPASy Swiss-Prot
Match: UBIQ_ICTPU (Ubiquitin OS=Ictalurus punctatus GN=rps27a PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.174e-33
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 1 
Query:   34 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGILPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 261
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGI PDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
The following BLAST results are available for this feature:
BLAST of EY744227 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 122
Match NameE-valueIdentityDescription
UBIQ_RABIT4.174e-3394.74Ubiquitin OS=Oryctolagus cuniculus PE=1 SV=1[more]
UBIQ_PONPY4.174e-3394.74Ubiquitin OS=Pongo pygmaeus GN=UBA52 PE=3 SV=2[more]
UBIQ_PLUXY4.174e-3394.74Ubiquitin OS=Plutella xylostella PE=3 SV=1[more]
UBIQ_PIG4.174e-3394.74Ubiquitin OS=Sus scrofa GN=UBA52 PE=3 SV=1[more]
UBIQ_PANTR4.174e-3394.74Ubiquitin OS=Pan troglodytes GN=UBB PE=1 SV=2[more]
UBIQ_OPHHA4.174e-3394.74Ubiquitin OS=Ophiophagus hannah PE=3 SV=1[more]
UBIQ_MOUSE4.174e-3394.74Ubiquitin OS=Mus musculus GN=Rps27a PE=1 SV=1[more]
UBIQ_MANSE4.174e-3394.74Ubiquitin OS=Manduca sexta PE=3 SV=1[more]
UBIQ_MACFA4.174e-3394.74Ubiquitin OS=Macaca fascicularis GN=UBA52 PE=3 SV=... [more]
UBIQ_ICTPU4.174e-3394.74Ubiquitin OS=Ictalurus punctatus GN=rps27a PE=3 SV... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-C09-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744227 ID=EY744227; Name=EY744227; organism=Citrus sinensis; type=EST; length=913bp
TGAAATTTGCTGGGTCTCTCCTCATCTGCAGCCATGCAGATCTTCGTGAA
AACCCTAACGGGAAAGACCATAACCCTAGAGGTCGAATCATCGGACACCA
TCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGGATTCTACCGGAC
CAGCAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCAGAACCCT
AGCCGACTACAACATCCAAAAGGAGTCAACACTCCACCTCGTCCTCCGTC
TCCGTGGTGGCGCGAAGAAGCGTAAGAAGAAGACCTACACCAAGCCGAAA
AAGATCAAGCACAAGAAGAAGAAGGTCAAGCTCGCCGTCTTGCAGTTTTA
CAAGGTCGATGATTCTGGAAAGGTCCAGAGGCTGAGGAAGGAGTGTCCGA
ATGCTGAGTGTGGAGCCGGCACCTTCATGGCTAACCACTTTGACAGGCAC
TACTGCGGCAAGTGTGGACTCACCTATGTTTACCAGAAGGCTGGCGGTGA
TTGATTCAAATTAGGTGGTTTGTTTTGCTTATTTTAATTAGTATTAATTA
CTATGGGTTTTTGTGGTTCAAAAATTAAGACTCTTTTCTAATTTTTGTTT
GAACTAAAACTTGTTTGGCTTGAACCGTTTTAATTTAAATGGTTACCTGT
TTTTAATTTTAAAAAAAAAAAAAAAATAAAAAAAAAAAAAAAAAAAAGAA
AAATGGGGGGGGCCGCTCATTAAGAATCCAGTCTAATCTACGCCCGGGCG
TGCGAATTTTCTAATTTTCTTTTATTTGTGGTCACCCTAAATTTTAATTC
TATGGGCGCTGTTGTTTTTTAAAAGTAGGGGGAAGGGGGGAAAAACCCCC
GGTGTGGTTTTCCCCCAACATTTTTTCCCTCCTTGTGATACACTCAATCC
CCCCCCCTTTTTC
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