EY744227

Overview
NameEY744227
Unique NameEY744227
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length913
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY744227 vs. ExPASy Swiss-Prot
Match: UBIQ_CAMDR (Ubiquitin OS=Camelus dromedarius PE=3 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 4.174e-33
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 1 
Query:   34 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGILPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 261
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGI PDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY744227 vs. ExPASy Swiss-Prot
Match: UBIQ_BOVIN (Ubiquitin OS=Bos taurus GN=RPS27A PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.174e-33
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 1 
Query:   34 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGILPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 261
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGI PDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY744227 vs. ExPASy Swiss-Prot
Match: UBIQ_TETPY (Ubiquitin OS=Tetrahymena pyriformis GN=TUF11 PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 5.452e-33
Identity = 71/76 (93.42%), Postives = 75/76 (98.68%), Query Frame = 1 
Query:   34 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGILPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 261
            MQIFVKTLTGKTITL+VE+SDTI+NVKAKIQDKEGI PDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY744227 vs. ExPASy Swiss-Prot
Match: UBIQ_SHEEP (Ubiquitin OS=Ovis aries GN=UBA52 PE=3 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 7.120e-33
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 1 
Query:   34 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGILPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 261
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGI PDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR+RGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRMRGG 76
[Close]
BLAST of EY744227 vs. ExPASy Swiss-Prot
Match: UBIQ_EIMBO (Ubiquitin OS=Eimeria bovis PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 9.299e-33
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 1 
Query:   34 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGILPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 261
            MQIFVKTLTGKTITL+VE SDTI+NVKAKIQDKEGI PDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY744227 vs. ExPASy Swiss-Prot
Match: UBIQ_TRYBB (Ubiquitin OS=Trypanosoma brucei brucei PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.215e-32
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 1 
Query:   34 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGILPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 261
            MQIFVKTLTGKTI LEVE+SDTI+NVKAKIQDKEGI PDQQRLIFAGKQLE+GRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY744227 vs. ExPASy Swiss-Prot
Match: UBIQ_STRPU (Ubiquitin OS=Strongylocentrotus purpuratus PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.215e-32
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 1 
Query:   34 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGILPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 261
            MQIFVKTLTGKTITLEVE SD+I+NVKAKIQDKEGI PDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY744227 vs. ExPASy Swiss-Prot
Match: UBIQ_ENCCU (Ubiquitin OS=Encephalitozoon cuniculi GN=ECU02_0740i PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.215e-32
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 1 
Query:   34 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGILPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 261
            MQIFVKTLTGKTITLEVE SD+I+NVKAKIQDKEGI PDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY744227 vs. ExPASy Swiss-Prot
Match: UBIQ_DICDI (Ubiquitin OS=Dictyostelium discoideum GN=ubqA PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.215e-32
Identity = 71/76 (93.42%), Postives = 73/76 (96.05%), Query Frame = 1 
Query:   34 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGILPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 261
            MQIFVKTLTGKTITLEVE SD I+NVKAKIQDKEGI PDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY744227 vs. ExPASy Swiss-Prot
Match: UBIQ_PHYIN (Ubiquitin OS=Phytophthora infestans PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.534e-32
Identity = 70/76 (92.11%), Postives = 73/76 (96.05%), Query Frame = 1 
Query:   34 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGILPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 261
            MQIFVKTLTGKTITL+VE SD+IDNVK KIQDKEGI PDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
The following BLAST results are available for this feature:
BLAST of EY744227 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 122
Match NameE-valueIdentityDescription
UBIQ_CAMDR4.174e-3394.74Ubiquitin OS=Camelus dromedarius PE=3 SV=2[more]
UBIQ_BOVIN4.174e-3394.74Ubiquitin OS=Bos taurus GN=RPS27A PE=1 SV=1[more]
UBIQ_TETPY5.452e-3393.42Ubiquitin OS=Tetrahymena pyriformis GN=TUF11 PE=3 ... [more]
UBIQ_SHEEP7.120e-3393.42Ubiquitin OS=Ovis aries GN=UBA52 PE=3 SV=2[more]
UBIQ_EIMBO9.299e-3393.42Ubiquitin OS=Eimeria bovis PE=2 SV=1[more]
UBIQ_TRYBB1.215e-3293.42Ubiquitin OS=Trypanosoma brucei brucei PE=3 SV=1[more]
UBIQ_STRPU1.215e-3293.42Ubiquitin OS=Strongylocentrotus purpuratus PE=3 SV... [more]
UBIQ_ENCCU1.215e-3293.42Ubiquitin OS=Encephalitozoon cuniculi GN=ECU02_074... [more]
UBIQ_DICDI1.215e-3293.42Ubiquitin OS=Dictyostelium discoideum GN=ubqA PE=1... [more]
UBIQ_PHYIN3.534e-3292.11Ubiquitin OS=Phytophthora infestans PE=1 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-C09-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744227 ID=EY744227; Name=EY744227; organism=Citrus sinensis; type=EST; length=913bp
TGAAATTTGCTGGGTCTCTCCTCATCTGCAGCCATGCAGATCTTCGTGAA
AACCCTAACGGGAAAGACCATAACCCTAGAGGTCGAATCATCGGACACCA
TCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGGATTCTACCGGAC
CAGCAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCAGAACCCT
AGCCGACTACAACATCCAAAAGGAGTCAACACTCCACCTCGTCCTCCGTC
TCCGTGGTGGCGCGAAGAAGCGTAAGAAGAAGACCTACACCAAGCCGAAA
AAGATCAAGCACAAGAAGAAGAAGGTCAAGCTCGCCGTCTTGCAGTTTTA
CAAGGTCGATGATTCTGGAAAGGTCCAGAGGCTGAGGAAGGAGTGTCCGA
ATGCTGAGTGTGGAGCCGGCACCTTCATGGCTAACCACTTTGACAGGCAC
TACTGCGGCAAGTGTGGACTCACCTATGTTTACCAGAAGGCTGGCGGTGA
TTGATTCAAATTAGGTGGTTTGTTTTGCTTATTTTAATTAGTATTAATTA
CTATGGGTTTTTGTGGTTCAAAAATTAAGACTCTTTTCTAATTTTTGTTT
GAACTAAAACTTGTTTGGCTTGAACCGTTTTAATTTAAATGGTTACCTGT
TTTTAATTTTAAAAAAAAAAAAAAAATAAAAAAAAAAAAAAAAAAAAGAA
AAATGGGGGGGGCCGCTCATTAAGAATCCAGTCTAATCTACGCCCGGGCG
TGCGAATTTTCTAATTTTCTTTTATTTGTGGTCACCCTAAATTTTAATTC
TATGGGCGCTGTTGTTTTTTAAAAGTAGGGGGAAGGGGGGAAAAACCCCC
GGTGTGGTTTTCCCCCAACATTTTTTCCCTCCTTGTGATACACTCAATCC
CCCCCCCTTTTTC
back to top