EY744223

Overview
NameEY744223
Unique NameEY744223
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length871
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744223 vs. ExPASy Swiss-Prot
Match: TYRB_KLEPN (Tyrosine aminotransferase OS=Klebsiella pneumoniae GN=tyrB PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.057e-27
Identity = 65/187 (34.76%), Postives = 101/187 (54.01%), Query Frame = 2
Query:  107 WRNVEPAAKDPILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANME--YLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQNRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFLLLHACAPNPPGS 661
            ++ V+  A DPIL + E F  DP  DKVN+ +G Y +D+G    L+ V EAE R+    +    YLPM G     +    L +G     +K  RIA++Q++ G+GA ++ ADF  R+ P+S +++  PTW NH  I+  A     T+ ++   T G+ F  L+  ++  P    +LLH C  NP G+
Sbjct:    2 FQKVDAYAGDPILSLMERFKEDPRSDKVNLSIGLYYNDDGIIPQLQAVAEAEARLNAEPHGASLYLPMEGFSGYRQAIAPLLFGAEHTALKQNRIASIQTVGGSGALKVGADFLKRYFPESHVWVSDPTWENHIAIFEGAGFEVSTYPWFDKATNGVRFENLLAMLQTLPARDIVLLHPCCHNPTGA 188          
BLAST of EY744223 vs. ExPASy Swiss-Prot
Match: TYRB_SALTY (Aromatic-amino-acid aminotransferase OS=Salmonella typhimurium GN=tyrB PE=3 SV=3)

HSP 1 Score: 117.087 bits (292), Expect = 1.331e-25
Identity = 64/187 (34.22%), Postives = 100/187 (53.48%), Query Frame = 2
Query:  107 WRNVEPAAKDPILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANME--YLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQNRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFLLLHACAPNPPGS 661
            ++ V+  A DPIL + E F  D   DKVN+ +G Y +++G    L+ V EAE R+    +    YLPM G          L +G +   ++ +R+A +Q+L G+GA ++ ADF  R+ PD+ +++  PTW NH  I+  A     T+ +Y   T G+ F  L+  +   P  S +LLH C  NP G+
Sbjct:    2 FQKVDAYAGDPILSLMERFKDDSRHDKVNLSIGLYYNEDGIIPQLKTVAEAEARLNAQPHGASLYLPMEGLNTYRHTIAPLLFGADHPVLQQQRVATIQTLGGSGALKVGADFLKRYFPDAGVWVSDPTWENHIAIFAGAGFEVSTYPWYDDATNGIRFNDLLATLNTLPARSIVLLHPCCHNPTGA 188          
BLAST of EY744223 vs. ExPASy Swiss-Prot
Match: TYRB_PARDE (Aromatic-amino-acid aminotransferase OS=Paracoccus denitrificans GN=tyrB PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.303e-24
Identity = 58/184 (31.52%), Postives = 96/184 (52.17%), Query Frame = 2
Query:  113 NVEPAAKDPILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANME-YLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQNRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFLLLHACAPNPPGS 661
            N++P A D IL +   F ADP   K+++GVG Y+D  G   ++  V  AE+R+  T   + Y  + G  +  +   +L  GD    +K +  A + ++ GTGA R   +     +PD ++++  PTW NH +I     +  +T+ Y+   T+G+DF  +  D+  A  G  +LLH C  NP G+
Sbjct:    4 NLKPQAPDKILALMGEFRADPRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGELILGDG---LKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGA 184          
BLAST of EY744223 vs. ExPASy Swiss-Prot
Match: AATC_CAEEL (Probable aspartate aminotransferase, cytoplasmic OS=Caenorhabditis elegans GN=T01C8.5 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.460e-23
Identity = 63/189 (33.33%), Postives = 97/189 (51.32%), Query Frame = 2
Query:  101 SWWRNVEPAAKDPILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERRIAG--TANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQNRFHPDSQIYIPVPTWSNHHNIWRDA-HVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFLLLHACAPNPPG 658
            S++  +  A    +    + +L + +P KVN+ +GAYR + G+P VL  V E E  IA   + N EYLP+ G     +   +L  G  S  IK++R   VQ LSGTGA R  A+F         +Y+  PTW NH  +++ A   T   + ++    K +     + D+++AP  S ++LH CA NP G
Sbjct:    2 SFFDGIPVAPPIEVFHKNKMYLDETAPVKVNLTIGAYRTEEGQPWVLPVVHETEVEIANDTSLNHEYLPVLGHEGFRKAATELVLGAESPAIKEERSFGVQCLSGTGALRAGAEFLASVCNMKTVYVSNPTWGNHKLVFKKAGFTTVADYTFWDYDNKRVHIEKFLSDLESAPEKSVIILHGCAHNPTG 190          

HSP 2 Score: 25.7942 bits (55), Expect = 1.460e-23
Identity = 8/14 (57.14%), Postives = 12/14 (85.71%), Query Frame = 3
Query:  651 PLGVDPSKEQWKKI 692
            P G+DP++EQWK +
Sbjct:  188 PTGMDPTQEQWKLV 201          
BLAST of EY744223 vs. ExPASy Swiss-Prot
Match: PHHC_PSEAE (Aromatic-amino-acid aminotransferase OS=Pseudomonas aeruginosa GN=phhC PE=3 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 4.431e-21
Identity = 61/177 (34.46%), Postives = 89/177 (50.28%), Query Frame = 2
Query:  134 DPILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQNRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHY-YHPGTKGLDFAALMDDIKNAPNGSFLLLHACAPNPPG 658
            DPILG+ +A+  DP  DK+++GVG Y+D  G   +L  V+ AE+R +       Y+   G         +LA G  S  + ++R  A Q+  GTGA RL  DF     P   I++  PTW  H  ++  A +  +  HY Y      LD  A++  ++  P G  +LLHAC  NP G
Sbjct:   13 DPILGLLDAYRNDPRADKLDLGVGVYKDAQGLTPILRSVKLAEQRLVEQETTKSYVGGHGDALFAARLAELALGAASPLLLEQRADATQTPGGTGALRLAGDFIAHCLPGRGIWLSDPTWPIHETLFAAAGL--KVSHYPYVSADNRLDVEAMLAGLERIPQGDVVLLHACCHNPTG 187          
BLAST of EY744223 vs. ExPASy Swiss-Prot
Match: ATTY_RHIME (Tyrosine aminotransferase OS=Rhizobium meliloti GN=tatA PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.175e-19
Identity = 57/178 (32.02%), Postives = 96/178 (53.93%), Query Frame = 2
Query:  128 AKDPILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANME-YLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQNRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFLLLHACAPNPPG 658
            A DP+L +   F  D  P KV++GVG YRD+ G+  +   V+ AE+R+  T + + Y+   G +  ++   +L  GD    I+   +A VQ+  G+GA RL AD   R      I++ +P+W NH  I++ A +   T+ ++   ++ + F  L+  ++ A +G  +LLHA   NP G
Sbjct:    9 ADDPLLALIGLFRKDERPGKVDLGVGVYRDETGRTPIFRAVKAAEKRLLETQDSKAYIGPEGDLVFLDRLWELVGGDT---IERSHVAGVQTPGGSGALRLAADLIARM-GGRGIWLGLPSWPNHAPIFKAAGLDIATYDFFDIPSQSVIFDNLVSALEGAASGDAVLLHASCHNPTG 182          
BLAST of EY744223 vs. ExPASy Swiss-Prot
Match: AATM_YEAST (Aspartate aminotransferase, mitochondrial OS=Saccharomyces cerevisiae GN=AAT1 PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.475e-16
Identity = 63/208 (30.29%), Postives = 100/208 (48.08%), Query Frame = 2
Query:  116 VEPAAKDPILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERRIAG----TANMEYLPMGGSVKMVEETLKLAYGDNSE-----FIKDKRIAAVQSLSGTGACRLFADFQNRFHPDSQIYIPVPTWSNHHNIWR-DAHVTQRTFHYYHPGTKGLD-------FAALMDDIKNAPNGSFLLLHACAPNPPGSGSFEGTMEK 688
            V  A  D +LG++E F    + +K+++ VG Y+D  GK      V +A++ I        N+ YLP+ GS +  E  +K  + ++       ++   RI+ VQ+LSGTGA  + A F   F     I+IP P+W+NH NI++ +       + YY  G   +D         A  +  +N  N   ++LHAC  NP G    +   EK
Sbjct:   23 VPRAPPDKVLGLSEHFKKVKNVNKIDLTVGIYKDGWGKVTTFPSVAKAQKLIESHLELNKNLSYLPITGSKEFQENVMKFLFKESCPQFGPFYLAHDRISFVQTLSGTGALAVAAKFLALF-ISRDIWIPDPSWANHKNIFQNNGFENIYRYSYYKDGQIDIDGWIEQLKTFAYNNQQENNKNPPCIILHACCHNPTGLDPTKEQWEK 229          
The following BLAST results are available for this feature:
BLAST of EY744223 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
TYRB_KLEPN7.057e-2734.76Tyrosine aminotransferase OS=Klebsiella pneumoniae... [more]
TYRB_SALTY1.331e-2534.22Aromatic-amino-acid aminotransferase OS=Salmonella... [more]
TYRB_PARDE7.303e-2431.52Aromatic-amino-acid aminotransferase OS=Paracoccus... [more]
AATC_CAEEL1.460e-2333.33Probable aspartate aminotransferase, cytoplasmic O... [more]
PHHC_PSEAE4.431e-2134.46Aromatic-amino-acid aminotransferase OS=Pseudomona... [more]
ATTY_RHIME3.175e-1932.02Tyrosine aminotransferase OS=Rhizobium meliloti GN... [more]
AATM_YEAST1.475e-1630.29Aspartate aminotransferase, mitochondrial OS=Sacch... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-C05-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744223 ID=EY744223; Name=EY744223; organism=Citrus sinensis; type=EST; length=871bp
AAAGAAGAAGAAAATCCAATTCTTTTACATGGCGATGCGGAGCTTGATAT
CGGAGCGGGTCTCGTGTCGGAGCTCTGTTTTAGGAGCTAGATGGATGTCG
TCGTGGTGGCGGAACGTGGAGCCCGCTGCTAAGGATCCGATTCTCGGCGT
CACTGAAGCTTTCTTGGCAGATCCCAGTCCTGATAAAGTCAATGTTGGAG
TCGGAGCTTATCGAGATGATAATGGAAAGCCAGTTGTTCTTGAATGCGTC
AGAGAAGCAGAGCGGAGAATTGCTGGAACCGCCAACATGGAGTATCTTCC
TATGGGAGGGAGTGTGAAAATGGTGGAGGAAACTCTGAAGCTCGCCTATG
GAGATAATTCTGAGTTCATCAAGGATAAAAGGATAGCAGCTGTACAATCT
CTCTCAGGGACTGGTGCATGCCGACTTTTTGCGGACTTTCAGAATCGTTT
TCATCCTGATTCTCAAATCTACATACCTGTCCCAACATGGTCCAACCACC
ATAACATCTGGAGAGATGCCCATGTCACTCAAAGGACTTTTCATTACTAT
CACCCTGGGACTAAGGGTTTAGATTTTGCAGCGCTGATGGATGACATTAA
GAATGCACCAAATGGTTCATTCCTTCTACTTCATGCTTGTGCTCCCAATC
CCCCTGGGAGTGGATCCTTCGAAGGAACAATGGAAAAAAATCCCATACCC
AATTTAAGGGAATTACTTGGTGGCCAATTATTACTTAACTTCAAATTTTA
TACTGGGGTGGCGGACAAATTTTGCCTGGAAAAAAAAAATAGGTTTCTTT
TTCGGGGAAAAGGGCCCCTTTCCCTTTTTTTTGAATGGGCGTATTCGGGG
TTTTGCCCGGGGGGGGGTCCC
back to top