EY744222

Overview
NameEY744222
Unique NameEY744222
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1004
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744222 vs. ExPASy Swiss-Prot
Match: CRF2_ARATH (Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana GN=CRF2 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 5.162e-11
Identity = 37/92 (40.22%), Postives = 47/92 (51.09%), Query Frame = 1
Query:  331 VKEESSDNPLXXXXXXXXXXEGTRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETXXXXXXXXXXXXLKFKGTKAKLNFPERVQGTTE 606
            VK ES+ +P+            T  + +RGVRQRPWGKWAAEIRDP K  R+WLGT+ T            ++ +G  A  NF       TE
Sbjct:  100 VKSESTVSPVVSATTTT-----TGEKKFRGVRQRPWGKWAAEIRDPLKRVRLWLGTYNTAEEAAMVYDNAAIQLRGPDALTNFSVTPTTATE 186          
BLAST of EY744222 vs. ExPASy Swiss-Prot
Match: ERF3_TOBAC (Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum GN=ERF3 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.741e-11
Identity = 31/63 (49.21%), Postives = 40/63 (63.49%), Query Frame = 1
Query:  394 GTRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETXXXXXXXXXXXXLKFKGTKAKLNFP 582
            G++   +RGVR+RPWG++AAEIRDP K  RVWLGTF++               +G KAK NFP
Sbjct:   22 GSKEIRFRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDAAARALRGPKAKTNFP 84          
BLAST of EY744222 vs. ExPASy Swiss-Prot
Match: DRE2F_ARATH (Dehydration-responsive element-binding protein 2F OS=Arabidopsis thaliana GN=DREB2F PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.741e-11
Identity = 33/63 (52.38%), Postives = 37/63 (58.73%), Query Frame = 1
Query:  412 YRGVRQRPWGKWAAEIRDPKKAARVWLGTFETXXXXXXXXXXXXLKFKGTKAKLNFPERVQGT 600
            YRGVRQR WGKW AEIR+PKK AR+WLG+F T            LK  G  A LN P   + T
Sbjct:   28 YRGVRQRTWGKWVAEIREPKKRARLWLGSFATAEEAAMAYDEAALKLYGHDAYLNLPHLQRNT 90          
BLAST of EY744222 vs. ExPASy Swiss-Prot
Match: RAP29_ARATH (Ethylene-responsive transcription factor RAP2-9 OS=Arabidopsis thaliana GN=RAP2-9 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.804e-11
Identity = 27/65 (41.54%), Postives = 39/65 (60.00%), Query Frame = 1
Query:  397 TRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETXXXXXXXXXXXXLKFKGTKAKLNFPERV 591
            +  + Y+G+R R WGKW AEIR+P K +R+WLG+++T               +G  A+LNFPE V
Sbjct:   31 SNEKRYKGIRMRKWGKWVAEIREPNKRSRIWLGSYKTAVAAARAYDTAVFYLRGPSARLNFPEEV 95          
BLAST of EY744222 vs. ExPASy Swiss-Prot
Match: ERF82_ARATH (Ethylene-responsive transcription factor 3 OS=Arabidopsis thaliana GN=ERF3 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.804e-11
Identity = 31/57 (54.39%), Postives = 38/57 (66.67%), Query Frame = 1
Query:  412 YRGVRQRPWGKWAAEIRDPKKAARVWLGTFETXXXXXXXXXXXXLKFKGTKAKLNFP 582
            +RGVR+RPWG++AAEIRDP K ARVWLGTF++               +G KAK NFP
Sbjct:   28 FRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSAEEAARAYDSAARNLRGPKAKTNFP 84          
BLAST of EY744222 vs. ExPASy Swiss-Prot
Match: DRE2D_ARATH (Dehydration-responsive element-binding protein 2D OS=Arabidopsis thaliana GN=DREB2D PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.804e-11
Identity = 30/61 (49.18%), Postives = 38/61 (62.30%), Query Frame = 1
Query:  412 YRGVRQRPWGKWAAEIRDPKKAARVWLGTFETXXXXXXXXXXXXLKFKGTKAKLNFPERVQ 594
            Y+GVRQR WGKW AEIR+P + AR+WLGTF+T             K  G +A LN PE ++
Sbjct:   42 YKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSREAALAYDSAARKLYGPEAHLNLPESLR 102          
The following BLAST results are available for this feature:
BLAST of EY744222 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
CRF2_ARATH5.162e-1140.22Ethylene-responsive transcription factor CRF2 OS=A... [more]
ERF3_TOBAC6.741e-1149.21Ethylene-responsive transcription factor 3 OS=Nico... [more]
DRE2F_ARATH6.741e-1152.38Dehydration-responsive element-binding protein 2F ... [more]
RAP29_ARATH8.804e-1141.54Ethylene-responsive transcription factor RAP2-9 OS... [more]
ERF82_ARATH8.804e-1154.39Ethylene-responsive transcription factor 3 OS=Arab... [more]
DRE2D_ARATH8.804e-1149.18Dehydration-responsive element-binding protein 2D ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-C04-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744222 ID=EY744222; Name=EY744222; organism=Citrus sinensis; type=EST; length=1004bp
CTCAACTTCCATGTCTACAGGTCTGTTAACAAAACCAAACAAAACAATTA
CTTTTTCCGTTGTATGTAATAAAATCCAATAAAAAAATTATTGCATTACA
TTAGAGTTTATAGAAGTGCTTATTGTAACTGCAAAAAAGTGGATCATCGA
AGGCATGGAAAGCGGCCACTTCCACTGGAAGCATCACCGGAGGAGAAAGA
GAAAGAACAAGACAACAACTTCCCTGCTTGGACTACTCATGAATCAGACA
TGTCTGCCATGGTTTCCGCTCTTACACAAGTAATTGGCACCACTACCACC
GACGCCGACGCCGACCCCTCGCCGGCAGCCGTTAAAGAAGAATCCTCCGA
TAACCCACTTCAACAAACTCAAACTCAAGATCAAGATCAAGAAGGTACAA
GGAGGAGACATTACAGAGGAGTAAGACAAAGACCTTGGGGCAAATGGGCA
GCCGAAATTAGAGACCCTAAAAAGGCAGCACGAGTATGGCTAGGTACATT
TGAGACTGCTGAAGATGCAGCCATGGCTTATGATAAAGCTGCCCTCAAAT
TCAAAGGCACCAAAGCTAAGCTTAATTTCCCTGAAAGAGTTCAGGGTACT
ACTGAGTTTGTGTATTTAAATTCATCATCATCAAGCTCTGCCTTTCATCA
TCATCATGAGTCGGTGATGCCTGCTCCTCCTCCCAGGCCTAACTCAATGC
ACCAGGGGGCATACCCGGAATTGCTTCAAAATGCCCAAAATTCAACCTTC
GGAAGATGCCAACTTTTAATTAACAAAACTTCCAAACCCCTTTAAACCCA
CAATCCTTCTACTTGGGTTCTTCTTTTCAACCCCCTTTCACGTTTTTTCC
TCCCTCCCTACTCACCCCCCATTGGGAAAAAAAACAAAGGGGAAAAAAAA
AAAAAAAATTTTTTCCCCAAAAAATTTTGAAAAAAACCGTGGTTCGGGGG
GGTTTTTAATTTTTTTTTAAAAGAATAAAATAATATATAAAAAAAACCCC
CCCC
back to top