EY744219
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_PASMU (50S ribosomal protein L13 OS=Pasteurella multocida GN=rplM PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.316e-23 Identity = 51/116 (43.97%), Postives = 71/116 (61.21%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEH 602 W V DA G+ LGRLA+++A ++GK K Y P+ D GD IV+NA+ + VTG K +K+Y+WHTGY+G +K+ T KE + R P I AV MLP+ ++ GSEH Sbjct: 15 WYVVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVINAEKVAVTGNKESDKLYHWHTGYVGGIKQATFKEMIARRPEAVIEIAVKGMLPKGPLGRAMYRKLKVYAGSEH 130
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_LACPL (50S ribosomal protein L13 OS=Lactobacillus plantarum GN=rplM PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.316e-23 Identity = 50/117 (42.74%), Postives = 74/117 (63.25%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEH 602 +W V DA LGRL++ VA++++GK+KPT+ PN D GD IV+NA + +TG+K + K+YY HT Y G LKERT + + ++PT+ I +V MLP N ++ G+EH Sbjct: 15 KWYVVDATDVPLGRLSTVVASILRGKNKPTFTPNVDTGDNVIVINASKVALTGKKAERKIYYHHTAYAGGLKERTAGDFLAKEPTKLIETSVKGMLPHNSLGHKMGLKLHVYAGAEH 131
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_GEOSL (50S ribosomal protein L13 OS=Geobacter sulfurreducens GN=rplM PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.316e-23 Identity = 51/126 (40.48%), Postives = 77/126 (61.11%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP*TI 632 W + DA +VLGR+A+++A +++GK KP Y P+ D GD +V+NA + +TG KL +K+YY HTG+ G +K T + +E+ P + IRKAV MLP+N ++ G EHP P T+ Sbjct: 16 WYLVDADNKVLGRMATEIANILRGKKKPIYTPSVDTGDFVVVVNAAKLQLTGNKLADKMYYHHTGFPGGIKSITAGKLIEKKPEDLIRKAVKGMLPKNKLARHMLKKLKVYAGPEHPHEAQQPKTL 141
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_DICTD (50S ribosomal protein L13 OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN=rplM PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.316e-23 Identity = 57/140 (40.71%), Postives = 80/140 (57.14%), Query Frame = 3 Query: 204 MKKALAGLRRINLEGLRWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP 623 MK +A I E W V DAKG+VLGRLAS++A +++GK KP Y P+ D GD IV+NAKD+ +TG+K K+Y++H+GY G + T ++ + P + I AV MLP+ I+ G EHP P Sbjct: 1 MKTFMAKKEEIKRE---WYVVDAKGKVLGRLASEIAKILRGKHKPIYTPHVDTGDFVIVVNAKDVVLTGKKEDQKIYFFHSGYPGGHRLITARDMRAKSPEKMIYLAVKGMLPKGPLGRKMLKKLKIYAGPEHPHQAQKP 137
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_DICT6 (50S ribosomal protein L13 OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=rplM PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.316e-23 Identity = 56/140 (40.00%), Postives = 81/140 (57.86%), Query Frame = 3 Query: 204 MKKALAGLRRINLEGLRWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP 623 MK +A I E W V DAKG+VLGRLAS++A +++GK KP Y P+ D GD IV+NAKD+ +TG+K + K+Y++H+GY G + + K+ + P + I AV MLP+ ++ G EHP P Sbjct: 1 MKTFMAKKEEIKRE---WYVVDAKGKVLGRLASEIAKILRGKHKPIYTPHVDTGDFVIVVNAKDVVLTGKKEQQKIYFFHSGYPGGHRLISAKDMRAKSPEKMIYLAVKGMLPKGPLGRKMLKKLKVYAGPEHPHQAQKP 137
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_BACWK (50S ribosomal protein L13 OS=Bacillus weihenstephanensis (strain KBAB4) GN=rplM PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.316e-23 Identity = 50/124 (40.32%), Postives = 76/124 (61.29%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP 623 +W V DA+GQ LGRL+++VA++++GK KPT+ P+ D GD I++NA+ I +TG KL +K+YY HT + G LK+RT E P + + A+ MLP+ ++ G+EHP P Sbjct: 15 KWYVVDAEGQTLGRLSTEVASILRGKHKPTFTPHVDTGDHVIIINAEKIHLTGNKLNDKIYYRHTNHPGGLKQRTALEMRTNYPVQMLELAIKGMLPKGRLGRQVSKKLNVYAGAEHPHQAQQP 138
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_SYNY3 (50S ribosomal protein L13 OS=Synechocystis sp. (strain PCC 6803) GN=rplM PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 9.555e-23 Identity = 53/127 (41.73%), Postives = 77/127 (60.63%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP*TI 632 +W V DA+GQ LGRLA++VAT+++GK+KPT+ P+ D GD I++NA+ I VTGRK + K+Y H+G G +KE T ++ R P + AV MLP+N ++ G HP P T+ Sbjct: 15 KWYVIDAEGQRLGRLATEVATILRGKNKPTFTPHMDTGDFVIIINAEKIEVTGRKREQKLYRRHSGRPGGMKEETFEKLQVRLPERIVESAVRGMLPKNSLGRKLFTKLKVYAGPSHPHAAQQPETL 141
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_STRM5 (50S ribosomal protein L13 OS=Stenotrophomonas maltophilia (strain R551-3) GN=rplM PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 9.555e-23 Identity = 50/117 (42.74%), Postives = 75/117 (64.10%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 W + DA+G+ LGRL +++A ++GK KP Y P+ D GD +V+NA+ I VTG+KL++K+Y+ TGYIG+LK +L + +ER P I AV MLP+ ++ G+EHP Sbjct: 15 WYLVDAEGKTLGRLCTELARRLRGKHKPVYTPHVDTGDYLVVINAEKIVVTGKKLQDKMYHRFTGYIGNLKTESLAQALERHPERVIETAVKGMLPKGPLGRQMYRKLKVYAGTEHP 131
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_RUTMC (50S ribosomal protein L13 OS=Ruthia magnifica subsp. Calyptogena magnifica GN=rplM PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 9.555e-23 Identity = 49/116 (42.24%), Postives = 71/116 (61.21%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEH 602 W + DA G++LGR A+Q+A+ ++GK KP Y P+ D GD +++NA I VTG K ++K+Y+ HTGY+G+LK K+ + P E I K V MLP+ +F GSEH Sbjct: 15 WLLVDADGKILGRFATQIASRLRGKHKPEYTPHTDTGDYIVIINASKIKVTGNKFEDKMYHHHTGYVGNLKSIAFKDLQAKKPEEIINKVVKGMLPKGPLGRDMFRKMKVFAGSEH 130
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_RHOSK (50S ribosomal protein L13 OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=rplM PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 9.555e-23 Identity = 56/133 (42.11%), Postives = 81/133 (60.90%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP*TIRDASS 647 +W + DA+G VLGRLA+ VA +++GK+KPT+ P+ D GD IV+NA + +TG K +K YYWHTG+ G +K RT ++ +E P + KAV RM+ RN ++ G+EHP P T+ D S Sbjct: 14 KWILIDAEGVVLGRLATIVANILRGKNKPTFTPHMDMGDNVIVINADKVQMTGNKRADKRYYWHTGHPGGVKFRTAEQVLEGAHPERVVLKAVERMISRNSLGRQQMTNLRVYAGAEHPHEAQQP-TVLDVKS 145 The following BLAST results are available for this feature:
BLAST of EY744219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY744219 ID=EY744219; Name=EY744219; organism=Citrus sinensis; type=EST; length=820bpback to top |