EY744219

Overview
NameEY744219
Unique NameEY744219
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length820
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_VESOH (50S ribosomal protein L13 OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=rplM PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.630e-22
Identity = 50/116 (43.10%), Postives = 71/116 (61.21%), Query Frame = 3
Query:  255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEH 602
            W + DA G+ LGRLA+++A+ ++GK KP Y P+ D GD  +V+NA  I VTG K ++K+YY HTGY+G+LK    K+   ++P   I KAV  MLP+            +F  SEH
Sbjct:   15 WLLIDADGKTLGRLATKIASCLRGKHKPEYTPHTDIGDYIVVINASKIKVTGNKFEDKIYYHHTGYVGNLKSIAFKDLQTKNPETIINKAVKGMLPKGPLGRDMFKKMKVFVDSEH 130          
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_THEAB (50S ribosomal protein L13 OS=Thermosipho africanus (strain TCF52B) GN=rplM PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.630e-22
Identity = 50/117 (42.74%), Postives = 76/117 (64.96%), Query Frame = 3
Query:  255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605
            W + +A+GQ LGRLA+++A V+ GK+KP + P+ D G+  +V+NA  I +TG+K   K+YY H+GY G +KE T ++  +R+P + I+ AV RMLP+            I+ GSEHP
Sbjct:   22 WYLINAEGQTLGRLATRIALVLMGKNKPNWTPHVDCGNFVVVINADKIKLTGKKWDQKIYYRHSGYPGGIKEFTARQLQQRNPEKLIQLAVKRMLPKTILGRKALKRLKIYAGSEHP 138          
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_LEGPL (50S ribosomal protein L13 OS=Legionella pneumophila (strain Lens) GN=rplM PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.630e-22
Identity = 52/123 (42.28%), Postives = 75/123 (60.98%), Query Frame = 3
Query:  255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP 623
            W V DA  +VLGRLA+++A  ++GK K  Y P+ D GD  IV NA+ + VTGRK KNK+Y+ HTG+ G +K  + ++  +++PT+ I  AV  MLP+N           ++ GSEHP     P
Sbjct:   15 WFVVDASEKVLGRLATEIARRLRGKHKAEYTPHVDTGDYIIVTNAEKVIVTGRKFKNKMYHHHTGFPGGIKSASFEKLQDKNPTKIIELAVKGMLPKNPLGREMYRKLKVYAGSEHPHTAQQP 137          
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_LEGPH (50S ribosomal protein L13 OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=rplM PE=3 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.630e-22
Identity = 52/123 (42.28%), Postives = 75/123 (60.98%), Query Frame = 3
Query:  255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP 623
            W V DA  +VLGRLA+++A  ++GK K  Y P+ D GD  IV NA+ + VTGRK KNK+Y+ HTG+ G +K  + ++  +++PT+ I  AV  MLP+N           ++ GSEHP     P
Sbjct:   15 WFVVDASEKVLGRLATEIARRLRGKHKAEYTPHVDTGDYIIVTNAEKVIVTGRKFKNKMYHHHTGFPGGIKSASFEKLQDKNPTKIIELAVKGMLPKNPLGREMYRKLKVYAGSEHPHTAQQP 137          
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_LEGPC (50S ribosomal protein L13 OS=Legionella pneumophila (strain Corby) GN=rplM PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.630e-22
Identity = 52/123 (42.28%), Postives = 75/123 (60.98%), Query Frame = 3
Query:  255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP 623
            W V DA  +VLGRLA+++A  ++GK K  Y P+ D GD  IV NA+ + VTGRK KNK+Y+ HTG+ G +K  + ++  +++PT+ I  AV  MLP+N           ++ GSEHP     P
Sbjct:   15 WFVVDASEKVLGRLATEIARRLRGKHKAEYTPHVDTGDYIIVTNAEKVVVTGRKFKNKMYHHHTGFPGGIKSASFEKLQDKNPTKIIELAVKGMLPKNPLGREMYRKLKVYAGSEHPHTAQQP 137          
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_LEGPA (50S ribosomal protein L13 OS=Legionella pneumophila (strain Paris) GN=rplM PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.630e-22
Identity = 52/123 (42.28%), Postives = 75/123 (60.98%), Query Frame = 3
Query:  255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP 623
            W V DA  +VLGRLA+++A  ++GK K  Y P+ D GD  IV NA+ + VTGRK KNK+Y+ HTG+ G +K  + ++  +++PT+ I  AV  MLP+N           ++ GSEHP     P
Sbjct:   15 WFVVDASEKVLGRLATEIARRLRGKHKAEYTPHVDTGDYIIVTNAEKVVVTGRKFKNKMYHHHTGFPGGIKSASFEKLQDKNPTKIIELAVKGMLPKNPLGREMYRKLKVYAGSEHPHTAQQP 137          
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_LAWIP (50S ribosomal protein L13 OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=rplM PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.630e-22
Identity = 51/117 (43.59%), Postives = 74/117 (63.25%), Query Frame = 3
Query:  252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEH 602
            +W + DA  ++LGRLA+Q+A  ++GK KP +AP+ D+GD  +V+N + I VTG K + K YY H+GY+G LKE TLK  +E+ P E +  AV  MLP+N           ++ G EH
Sbjct:   14 QWFLVDAHNKILGRLAAQIAHRLRGKHKPEFAPHIDNGDYIVVVNCEQIKVTGNKQEQKKYYRHSGYVGGLKETTLKTLLEKKPAEVLIHAVRGMLPKNRLGRAMLKKLKVYAGPEH 130          
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_HAESO (50S ribosomal protein L13 OS=Haemophilus somnus GN=rplM PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.630e-22
Identity = 50/116 (43.10%), Postives = 69/116 (59.48%), Query Frame = 3
Query:  255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEH 602
            W V DA G+ LGRL  ++A  ++GK K  Y P+ D GD  +V+NA+ + VTG K  +K+YYWHTGY+G +K+ T KE + R P   I  AV  MLP+            ++ GSEH
Sbjct:   15 WYVVDATGKTLGRLGHELARRLRGKHKAEYTPHVDTGDYIVVINAEKVAVTGNKETDKLYYWHTGYVGGIKQATFKEMIARRPEAVIEIAVKGMLPKGPLGRAMFRKLKVYAGSEH 130          
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_BACSK (50S ribosomal protein L13 OS=Bacillus clausii (strain KSM-K16) GN=rplM PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.630e-22
Identity = 51/117 (43.59%), Postives = 73/117 (62.39%), Query Frame = 3
Query:  252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEH 602
            +W V DA+GQ LGRLAS+VA++++GK KPT+ P+ D GD  IVLNA  I +TG KL++K+YY HT + G LK+   ++     P   +  A+  MLP+N           ++ GSEH
Sbjct:   15 KWYVVDAEGQTLGRLASEVASILRGKHKPTFTPHVDTGDHVIVLNASKIQLTGNKLQDKIYYRHTNHPGGLKQTKAQDMRANKPERMLELAIKGMLPKNTLGRKQGMKLHVYAGSEH 131          
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_BACCZ (50S ribosomal protein L13 OS=Bacillus cereus (strain ZK / E33L) GN=rplM PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.630e-22
Identity = 51/124 (41.13%), Postives = 76/124 (61.29%), Query Frame = 3
Query:  252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP 623
            +W V DA+GQ LGRLAS+VA++++GK+KPT+ P+ D GD  I++NA+ I +TG KL +K+YY HT + G LK+RT        P + +  A+  MLP+            ++ G+EHP     P
Sbjct:   15 KWYVVDAEGQTLGRLASEVASILRGKNKPTFTPHVDTGDHVIIINAEKIHLTGNKLNDKMYYRHTNHPGGLKQRTALVLRTNYPVQMLELAIKGMLPKGRLGRQVSKKLNVYAGAEHPHQAQKP 138          
The following BLAST results are available for this feature:
BLAST of EY744219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RL13_VESOH1.630e-2243.1050S ribosomal protein L13 OS=Vesicomyosocius okuta... [more]
RL13_THEAB1.630e-2242.7450S ribosomal protein L13 OS=Thermosipho africanus... [more]
RL13_LEGPL1.630e-2242.2850S ribosomal protein L13 OS=Legionella pneumophil... [more]
RL13_LEGPH1.630e-2242.2850S ribosomal protein L13 OS=Legionella pneumophil... [more]
RL13_LEGPC1.630e-2242.2850S ribosomal protein L13 OS=Legionella pneumophil... [more]
RL13_LEGPA1.630e-2242.2850S ribosomal protein L13 OS=Legionella pneumophil... [more]
RL13_LAWIP1.630e-2243.5950S ribosomal protein L13 OS=Lawsonia intracellula... [more]
RL13_HAESO1.630e-2243.1050S ribosomal protein L13 OS=Haemophilus somnus GN... [more]
RL13_BACSK1.630e-2243.5950S ribosomal protein L13 OS=Bacillus clausii (str... [more]
RL13_BACCZ1.630e-2241.1350S ribosomal protein L13 OS=Bacillus cereus (stra... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-C01-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744219 ID=EY744219; Name=EY744219; organism=Citrus sinensis; type=EST; length=820bp
ATAAACCATACTCTTAGGGTTTACGCAGGGCCATCTCTAACTTTTGTTAT
TATTATTATTTGAATGTCCTTTACTTTTGATTTTGGGTTGTAATTTGAAT
ATAGCTCTGAATTTGATTTGCGTTACTCATTTTTGTTTAAAAGAAGTTAT
AACAGAGCAATAGAAAAATGGCAAACCAAGCAGCCACAGCTTTCAGTGGC
AACATGAAGAAAGCGCTTGCTGGGCTGAGGCGAATCAATCTAGAAGGTCT
ACGATGGAGAGTTTTTGATGCTAAAGGCCAGGTCCTTGGGAGATTAGCAT
CTCAGGTAGCTACTGTCGTTCAAGGCAAGGATAAGCCTACGTACGCTCCT
AATCGTGATGATGGTGATATGTGCATTGTGCTTAATGCAAAAGATATATG
TGTTACTGGGAGGAAACTTAAAAATAAGGTTTACTACTGGCATACCGGGT
ATATAGGCCACCTCAAGGAAAGGACCTTAAAAGAACAGATGGAGAGGGAC
CCTACAGAAGCCATTCGTAAAGCTGTCTTACGCATGCTTCCAAGAAATAA
ATTACGTGATGATAGAGATCGAAAACTGAGGATTTTTCCTGGAAGCGAGC
ACCCTTTTTGGCGACCGGCCCCCTGAACCATACGTGATGCCTCCTCGACG
TGGTAGAGAACTGCGACCTCGGGTTAGAAGAGCCATGATTAAAAGAACAA
AAAAAGGCGGAAAAGCAGCCAAATAACCAGGGATTGAGGAAAAACAAAAA
GAAAAAATTTGAAAACAAAATGGCTGGCCTGAAAATTTTGGTGGGGGCCC
CTTTTGGTTTTGAAAAGGGA
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