EY744219
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_RHOCS (50S ribosomal protein L13 OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=rplM PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 6.194e-22 Identity = 52/119 (43.70%), Postives = 75/119 (63.03%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 +W + DA G VLGRLASQ+A ++GK KPTY P+ D GD IV+NA+ + +TG K ++ ++YWHTGY G +K R+ + ++ R P I KAV RM+PR ++ G+ HP Sbjct: 14 KWILIDADGLVLGRLASQIAMRLRGKHKPTYTPHMDCGDNVIVINAEKVKLTGNKRQDDIFYWHTGYPGGIKGRSKGQILDGRFPERVIIKAVERMVPRGPLGRRQMGNLRVYAGTAHP 132
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_MYCPA (50S ribosomal protein L13 OS=Mycobacterium paratuberculosis GN=rplM PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 6.194e-22 Identity = 51/123 (41.46%), Postives = 71/123 (57.72%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP 623 W V DA VLGRLA A +++GK KPT+APN D GD IV+NA + +G+KL K+ Y H+GY G L+ RT+ E M++ P + A++ MLP+N ++ G EHP P Sbjct: 15 WYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVVNADKVAFSGQKLDKKLAYRHSGYPGGLRSRTIGELMQKHPDRVVADAIVGMLPKNKLSRQIQRKLRVYAGPEHPHTAQQP 137
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_MYCA1 (50S ribosomal protein L13 OS=Mycobacterium avium (strain 104) GN=rplM PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 6.194e-22 Identity = 51/123 (41.46%), Postives = 71/123 (57.72%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP 623 W V DA VLGRLA A +++GK KPT+APN D GD IV+NA + +G+KL K+ Y H+GY G L+ RT+ E M++ P + A++ MLP+N ++ G EHP P Sbjct: 15 WYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVVNADKVAFSGQKLDKKLAYRHSGYPGGLRSRTIGELMQKHPDRVVADAIVGMLPKNKLSRQIQRKLRVYAGPEHPHTAQQP 137
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_BAUCH (50S ribosomal protein L13 OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=rplM PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 6.194e-22 Identity = 53/123 (43.09%), Postives = 74/123 (60.16%), Query Frame = 3 Query: 240 LEGLR--WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEH 602 LE +R W + DA ++LGR AS +A ++GK K Y P+ D GD IVLNAK I VTG KL +K YY +TG++G +KE+ LK+ M + P I +AV MLP+ ++ G+EH Sbjct: 8 LENIRRNWYIMDASNKILGRFASNIALRLRGKHKVIYTPHIDTGDYIIVLNAKKITVTGNKLSDKKYYHYTGFVGGIKEQNLKDLMTKRPEYVIERAVKGMLPKGALGKAMLKKLKVYAGTEH 130
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_GEOKA (50S ribosomal protein L13 OS=Geobacillus kaustophilus GN=rplM PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 8.089e-22 Identity = 54/124 (43.55%), Postives = 73/124 (58.87%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP 623 +W V DA G+ LGRLAS+VA +++GK KPT+ P+ D GD IV+NA + +TG+KL K+YY H+ Y G LK RT E P + I +AV MLP+ ++ GSEHP P Sbjct: 15 KWYVVDAAGKTLGRLASEVAALLRGKHKPTFTPHVDCGDHVIVINADKVELTGKKLTKKLYYRHSLYPGGLKVRTALEMRTNYPEQMIERAVRGMLPKGSLGRQMFKKLHVYRGSEHPHQAQKP 138
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_CLOCE (50S ribosomal protein L13 OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=rplM PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 8.089e-22 Identity = 50/117 (42.74%), Postives = 76/117 (64.96%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEH 602 +W + DA+G+ LGRLAS+VA++++GK+KP + P+ D GD IVLNA+ + +TG+KL K++ +HT + G LKE + ME+ P AI AV MLP+N ++ G+EH Sbjct: 14 KWYIIDAEGKPLGRLASEVASIIRGKNKPIFTPHVDTGDHVIVLNAEKVLLTGKKLDQKLHRYHTLHPGGLKEIKYRHLMEKHPERAIELAVKGMLPKNSLGRQMYRKLKVYRGAEH 130
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_BEUC1 (50S ribosomal protein L13 OS=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) GN=rplM PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 8.089e-22 Identity = 53/125 (42.40%), Postives = 74/125 (59.20%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP*T 629 W V DA VLGRLASQVA +++GK K T+AP+ D GD IV+NA + +TG K + K+ Y H+GY G LK + E +E+ P A+ KA+ M+P+N ++ G+EHP P T Sbjct: 15 WYVIDATDVVLGRLASQVAKLLRGKHKATFAPHVDTGDFVIVVNADKVALTGNKEQQKLAYRHSGYPGGLKATSYAELLEKRPERAVEKAIRGMVPKNSLGRAQMRKLKVYAGAEHPHGAQKPQT 139
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_YERE8 (50S ribosomal protein L13 OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=rplM PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.056e-21 Identity = 50/116 (43.10%), Postives = 71/116 (61.21%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEH 602 W V DA G+ LGRLA+++A+ ++GK K Y P+ D GD IVLNA+ + VTG K +K+YY HTG+IG +K+ T +E + R P I AV MLP+ ++ G+EH Sbjct: 15 WYVVDANGKTLGRLATELASRLRGKHKAEYTPHVDTGDYIIVLNAEKVAVTGNKRTDKIYYRHTGHIGGIKQATFEEMIARSPERVIEIAVKGMLPKGPLGRAMYRKLKVYAGTEH 130
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_THELT (50S ribosomal protein L13 OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=rplM PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.056e-21 Identity = 49/120 (40.83%), Postives = 74/120 (61.67%), Query Frame = 3 Query: 246 GLRWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 G +W V DA G+VLGRLASQ+A + GK++PT+ P D+G+ +V+NA + +TG+KL K+YY ++GY G LK+ T ++ +E+ P I AV RMLP+ ++ HP Sbjct: 17 GKKWFVVDASGKVLGRLASQIAKYLMGKNEPTFFPGVDNGNYVVVINADKVLLTGKKLDKKMYYHYSGYPGGLKQLTARQLLEKHPERLIYLAVKRMLPKAALGTKYLKRLKVYASDSHP 136
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_SACD2 (50S ribosomal protein L13 OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=rplM PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.056e-21 Identity = 48/123 (39.02%), Postives = 75/123 (60.98%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP 623 W + DA G+ LGR+A+++A ++GK KP + P+ D GD +V+NA+ + VTGRK +K+YY HTG+IG +K + ++ +++ P I+ AV MLPR ++ GSEHP P Sbjct: 15 WYIIDADGKTLGRMAAEIAHRLRGKHKPEFTPHVDTGDYIVVINAEKVRVTGRKATDKMYYSHTGFIGGIKSISFEKLIDKAPERTIQNAVKGMLPRGPLGRAMFKKLKVYGGSEHPHTAQQP 137 The following BLAST results are available for this feature:
BLAST of EY744219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY744219 ID=EY744219; Name=EY744219; organism=Citrus sinensis; type=EST; length=820bpback to top |