EY744219
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_THEPX (50S ribosomal protein L13 OS=Thermoanaerobacter sp. (strain X514) GN=rplM PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.879e-24 Identity = 57/117 (48.72%), Postives = 75/117 (64.10%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEH 602 +W V DA+G+VLGRLASQ+A ++ GK KPTY P+ D GD IVLNA+ I +TG KL++K Y ++TGY G LKE K+ M+ P I AV MLP+N ++ GSEH Sbjct: 14 KWFVIDAEGKVLGRLASQIAKILMGKHKPTYTPHVDTGDFVIVLNAEKIVLTGNKLEDKYYKYYTGYPGGLKEVQYKKLMQTKPEFVIYHAVKGMLPKNRLGRRMIKRLKVYRGSEH 130
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_THEP3 (50S ribosomal protein L13 OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=rplM PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.879e-24 Identity = 57/117 (48.72%), Postives = 75/117 (64.10%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEH 602 +W V DA+G+VLGRLASQ+A ++ GK KPTY P+ D GD IVLNA+ I +TG KL++K Y ++TGY G LKE K+ M+ P I AV MLP+N ++ GSEH Sbjct: 14 KWFVIDAEGKVLGRLASQIAKILMGKHKPTYTPHVDTGDFVIVLNAEKIVLTGNKLEDKYYKYYTGYPGGLKEVQYKKLMQTKPEFVIYHAVKGMLPKNRLGRRMIKRLKVYRGSEH 130
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_SYNAS (50S ribosomal protein L13 OS=Syntrophus aciditrophicus (strain SB) GN=rplM PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.879e-24 Identity = 50/116 (43.10%), Postives = 78/116 (67.24%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEH 602 W + DA+GQVLGR+AS++A ++GK KP Y P+ D GD +V+NA+ + +TG+KL++K+YY H+GY G LKE+T + M+ PT+ + AV MLP+N ++ G++H Sbjct: 15 WYLIDAEGQVLGRMASEIARRLRGKHKPEYTPHVDTGDFIVVVNAEKMVLTGKKLRDKIYYHHSGYPGGLKEKTAGKMMQEKPTDVLWLAVKGMLPKNSLGRRMLRKLKVYAGNDH 130
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_RHIEC (50S ribosomal protein L13 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=rplM PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.879e-24 Identity = 54/119 (45.38%), Postives = 75/119 (63.03%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 +W + DA+G V+GRLAS +A ++GK K T+ P+ DDGD IV+NA + TG+K +KVYYWHTGY G +KERT ++ +E R P + KAV RM+PR ++ G HP Sbjct: 14 KWVIIDAEGLVVGRLASIIAMRLRGKHKATFTPHVDDGDNVIVINADKVVFTGKKYSDKVYYWHTGYAGGIKERTARQIIEGRFPERVLEKAVERMVPRGPLGRRQMKNLRVYAGPNHP 132
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_PERMH (50S ribosomal protein L13 OS=Persephonella marina (strain DSM 14350 / EX-H1) GN=rplM PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.879e-24 Identity = 58/133 (43.61%), Postives = 76/133 (57.14%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP*TIRDASSTW 653 W V DA G+ LGRLA+ +A +++GK KP + P+ D GD IVLNA I VTG+KL +K Y WHT G L RTL+ +E P E IR AV RMLP+N ++ GSEH P + + + W Sbjct: 15 WYVIDATGKNLGRLATLIANILRGKHKPYFQPDVDVGDFVIVLNADKITVTGKKLTDKEYKWHTNRPGGLNVRTLQWMLEHKPEEVIRLAVERMLPKNKLQKRFMKRLKVYTGSEHKHQAQNPKNLEELKALW 147
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_MYCA9 (50S ribosomal protein L13 OS=Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) GN=rplM PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.879e-24 Identity = 52/117 (44.44%), Postives = 76/117 (64.96%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 W V DA VLGRLA Q A +++GK KPT+AP+ D GD I++NA+ I ++G KL NK Y H+G+ G L +R++ EQ+E+ PT + KA++ MLP+N ++ G+EHP Sbjct: 15 WYVIDATDVVLGRLAVQAANLLRGKHKPTFAPHVDGGDFVIIINAEKIALSGNKLTNKFAYRHSGFPGGLSKRSIGEQLEKFPTRTVEKAIVGMLPKNKLGRQIERKLKVYAGAEHP 131
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_CYAP7 (50S ribosomal protein L13 OS=Cyanothece sp. (strain PCC 7424) GN=rplM PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.879e-24 Identity = 58/134 (43.28%), Postives = 81/134 (60.45%), Query Frame = 3 Query: 237 NLEGL--RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP*TI 632 NLE L +W V DA GQ LGRLAS++A +++GK+KPTY P+ D GD IV+NA+ + VTG+K + KVY+ H+G G +K T ++ R P + KAV MLP+N ++ GS HP P T+ Sbjct: 8 NLETLDKQWYVIDAAGQRLGRLASEIAMILRGKNKPTYTPHLDTGDFVIVINAEKVIVTGKKSQQKVYHRHSGRPGGMKVETFEKLQARLPERIVEKAVKGMLPKNSLGRQLFTKLKVYSGSNHPHQAQKPETL 141
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_BARQU (50S ribosomal protein L13 OS=Bartonella quintana GN=rplM PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.879e-24 Identity = 55/119 (46.22%), Postives = 77/119 (64.71%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 +W + DA+ VLGRLA+ VA ++GK K T+ P+ DDGD IV+NA I +TG+K +K YYWHTGYIG +KERT ++ +E R P + KAV RM+PR ++ GS++P Sbjct: 14 KWVIIDAENLVLGRLAAFVANRLRGKHKATFTPHVDDGDNVIVINADKIVLTGKKYTDKKYYWHTGYIGGIKERTARQILEGRFPERVVEKAVERMIPRGPLGRRQLRNLHVYAGSQNP 132
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_THISH (50S ribosomal protein L13 OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=rplM PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 5.067e-24 Identity = 52/116 (44.83%), Postives = 73/116 (62.93%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEH 602 W + DA G+ LGRLAS+VA ++GK KP Y P+ D GD +++NA + V+G+K ++K+YY HTGYIGH+K + MER P AI AV MLP+N ++ G+EH Sbjct: 15 WYLVDASGKTLGRLASEVARRLRGKHKPEYTPHVDTGDYIVIINADKVRVSGKKAQDKMYYHHTGYIGHMKSMNFNQLMERAPERAIEFAVKGMLPKNPLGRAMFKKLKVYAGTEH 130
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_RHOPS (50S ribosomal protein L13 OS=Rhodopseudomonas palustris (strain BisB5) GN=rplM PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 6.617e-24 Identity = 56/119 (47.06%), Postives = 75/119 (63.03%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 +W + DA G V+GRLA+ VA ++GK PTY P+ D GD I++NA + +TGRK NKVYY HTG+IG +KERT K +E R P + KAV RM+PR ++ G+EHP Sbjct: 14 KWVIIDATGLVVGRLATLVAMRLRGKHLPTYTPHVDCGDNIIIINAAKVVLTGRKRDNKVYYHHTGFIGGIKERTAKSILEGRFPERVVEKAVERMIPRGPLGRVQMGNLRVYGGAEHP 132 The following BLAST results are available for this feature:
BLAST of EY744219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY744219 ID=EY744219; Name=EY744219; organism=Citrus sinensis; type=EST; length=820bpback to top |