EY744215

Overview
NameEY744215
Unique NameEY744215
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length967
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744215 vs. ExPASy Swiss-Prot
Match: YHEB_SCHPO (Uncharacterized protein PB2B2.11 OS=Schizosaccharomyces pombe GN=SPBPB2B2.11 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.657e-33
Identity = 85/203 (41.87%), Postives = 121/203 (59.61%), Query Frame = 1
Query:   76 LITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASS--NFKFVKGDIAS--ADLVNFLLITESIDTIMH---FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT----GQIRR---FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNHFPEK 642
            LITG AGFI S+  +  +  YP++    +DKL Y SN   +  SK  +  NF+F++ D+A+    L  F++    I+ I H   FAA++ VD SF +   FTKNNI  T  LLE  ++      ++R    F+HVSTDEVYGE DE+A V   E S+L PT+PY+A+KA  ++++ +Y  SY + V   R NNVYGP  + EK
Sbjct:   13 LITGGAGFIGSNFLDYAVDKYPDFHFTCIDKLSYVSNYTTVFLSKVLNQPNFRFLEMDLATNYKFLYQFMVEDSEINKITHIINFAAESSVDRSFIDPLYFTKNNILSTQNLLECVRILLGKKEELRNRLNFVHVSTDEVYGEQDENASVD--EKSKLNPTSPYAASKAAVDLIIQSYRYSYKISVTVIRANNVYGPRQYEEK 213          
BLAST of EY744215 vs. ExPASy Swiss-Prot
Match: RFBB_ECOLX (dTDP-glucose 4,6-dehydratase OS=Escherichia coli GN=rfbB PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 3.470e-33
Identity = 83/205 (40.49%), Postives = 113/205 (55.12%), Query Frame = 1
Query:   73 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK--------VTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLL-------PTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNHFPEK 642
            IL+TG AGFI S V   +I N  +  +V +DKL Y  NL++L     S  + F   DI  A+          +D +MH AA++HVD S      F + NI GT+VLLEA +           +  RF H+STDEVYG+      V ++E  QL        P++PYSA+KA ++ LV A+ R+YGLP I +  +N YGP HFPEK
Sbjct:    3 ILVTGGAGFIGSAVVRHIINNTQD-SVVNVDKLTYAGNLESLAEISDSERYSFENADICDAEGDGLYFGQHQLDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSGLDDEKKKNFRFHHISTDEVYGDLPHPDEVNSNETLQLFTETTAYAPSSPYSASKASSDHLVRAWKRTYGLPTIVSNCSNNYGPYHFPEK 206          
BLAST of EY744215 vs. ExPASy Swiss-Prot
Match: RFBB_NEIMA (dTDP-glucose 4,6-dehydratase OS=Neisseria meningitidis serogroup A GN=rfbB1 PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 5.919e-33
Identity = 85/203 (41.87%), Postives = 117/203 (57.64%), Query Frame = 1
Query:   67 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ--------IRRFIHVSTDEVYGE---TDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNHFPEK 642
            + IL+TG AGFI S V   +IRN  +  +V LDKL Y  NL++L     +  + F + DI     ++ +      D +MH AA++HVD S G++ EF + NI GT  LLEA +   Q          RF H+STDEVYG+   TD+       E +   P++PYSA+KA ++ LV A+ R+YGLP I T  +N YGP HFPEK
Sbjct:    2 RKILVTGGAGFIGSAVVRHIIRNTQD-SVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICDRAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYRQQMPSEKHEAFRFHHISTDEVYGDLSGTDDLFT----ETAPYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEK 199          
BLAST of EY744215 vs. ExPASy Swiss-Prot
Match: SPSJ_BACSU (Spore coat polysaccharide biosynthesis protein spsJ OS=Bacillus subtilis GN=spsJ PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.938e-32
Identity = 79/192 (41.15%), Postives = 118/192 (61.46%), Query Frame = 1
Query:   67 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNHFPEK 642
            K+ LITG AGFI       ++R   + +I VLDKL Y S+ + +   K +S F+FVKGDI+  + ++     E+ D ++HFAA++HVD S   +  F   N+ GT+ L EA  + G+ ++ IH+STDEVYG+   D      E + L P NPYSA+KA +++LV++Y +++ LP I TR +N YGP    EK
Sbjct:    3 KSYLITGGAGFIGLTFTKLMLRE-TDARITVLDKLTYASHPEEMEKLKQNSRFRFVKGDISVQEDID-RAFDETYDGVIHFAAESHVDRSISQAEPFITTNVMGTYRLAEAV-LKGKAKKLIHISTDEVYGDLKADDPAFT-ETTPLSPNNPYSASKASSDLLVLSYVKTHKLPAIITRCSNNYGPYQHSEK 190          
BLAST of EY744215 vs. ExPASy Swiss-Prot
Match: RFBB_NEIMB (dTDP-glucose 4,6-dehydratase OS=Neisseria meningitidis serogroup B GN=rfbB1 PE=3 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 3.837e-32
Identity = 84/203 (41.38%), Postives = 117/203 (57.64%), Query Frame = 1
Query:   67 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR--------RFIHVSTDEVYGE---TDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNHFPEK 642
            + IL+TG AGFI S V   +IRN  +  +V +DKL Y  NL++L     +  + F + DI     ++ +      D +MH AA++HVD S G++ EF + NI GT  LLEA +   Q          RF H+STDEVYG+   TD+       E +   P++PYSA+KA ++ LV A+ R+YGLP I T  +N YGP HFPEK
Sbjct:    2 RKILVTGGAGFIGSAVVRHIIRNTRD-AVVNVDKLTYAGNLESLTEVADNPRYAFEQVDICDRAELDRVFAQYRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYWQQMPSEQHEAFRFHHISTDEVYGDLGGTDDLFT----ETAPYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEK 199          
BLAST of EY744215 vs. ExPASy Swiss-Prot
Match: RFBB_SALTY (dTDP-glucose 4,6-dehydratase OS=Salmonella typhimurium GN=rfbB PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 5.011e-32
Identity = 82/205 (40.00%), Postives = 113/205 (55.12%), Query Frame = 1
Query:   73 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK----VTGQIR----RFIHVSTDEVYGETDEDAVVGNH-------EASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNHFPEK 642
            ILITG AGFI S V   +I+N  +  +V +DKL Y  NL++L     S+ + F   DI  +  +  +      D +MH AA++HVD S      F + NI GT+ LLE  +      G+ +    RF H+STDEVYG+      V N        E +   P++PYSA+KA ++ LV A+ R+YGLP I T  +N YGP HFPEK
Sbjct:    3 ILITGGAGFIGSAVVRHIIKNTQD-TVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEK 206          
BLAST of EY744215 vs. ExPASy Swiss-Prot
Match: RFBB_ECOLI (dTDP-glucose 4,6-dehydratase OS=Escherichia coli (strain K12) GN=rfbB PE=3 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 5.011e-32
Identity = 83/205 (40.49%), Postives = 109/205 (53.17%), Query Frame = 1
Query:   73 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR--------RFIHVSTDEVYGETDEDAVVGNHEASQLL-------PTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNHFPEK 642
            IL+TG AGFI S V   +I N  +  +V +DKL Y  N ++L     S  + F   DI  A  +  +      D +MH AA++HVD S      F + NI GT+VLLEA +              RF H+STDEVYG+      V N E   L        P++PYSA+KA ++ LV A+ R+YGLP I T  +N YGP HFPEK
Sbjct:    3 ILVTGGAGFIGSAVVRHIINNTQD-SVVNVDKLTYAGNRESLADVSDSERYVFEHADICDAPAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDSDKKNSFRFHHISTDEVYGDLPHPDEVNNTEELPLFTETTAYAPSSPYSASKASSDHLVRAWKRTYGLPTIVTNCSNNYGPYHFPEK 206          
BLAST of EY744215 vs. ExPASy Swiss-Prot
Match: RFFG_ECOLI (dTDP-glucose 4,6-dehydratase OS=Escherichia coli (strain K12) GN=rffG PE=1 SV=3)

HSP 1 Score: 137.887 bits (346), Expect = 8.548e-32
Identity = 85/203 (41.87%), Postives = 111/203 (54.68%), Query Frame = 1
Query:   67 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV--------TGQIRRFIHVSTDEVYGE---TDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNHFPEK 642
            + ILITG AGFI S +  R I N     +VV+DKL Y  NL +L P   S  F F K DI     +  +      D +MH AA++HVD S      F + NI GT+ LLEA +              RF H+STDEVYG+   TD+       E +   P++PYSA+KA ++ LV A+ R+YGLP + T  +N YGP HFPEK
Sbjct:    2 RKILITGGAGFIGSALV-RYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFT----ETTPYAPSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEK 199          
BLAST of EY744215 vs. ExPASy Swiss-Prot
Match: RFBB_NEIGO (dTDP-glucose 4,6-dehydratase OS=Neisseria gonorrhoeae GN=rfbB PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.116e-31
Identity = 85/209 (40.67%), Postives = 118/209 (56.46%), Query Frame = 1
Query:   49 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ--------IRRFIHVSTDEVYGE---TDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNHFPEK 642
            M T   KNIL+TG AGFI S V   +I+N  +  +V LDKL Y  NL++L     +  + F + DI     ++ +      D +MH AA++HVD + G++ EF + NI GT  LLEA +   Q          RF H+STDEVYG+   TD+       E +   P++PYSA+KA A+ LV A+ R+Y LP I +  +N YGP  FPEK
Sbjct:    1 MQTEGKKNILVTGGAGFIGSAVVRHIIQNTRD-SVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICDRAELDRVFAQYRPDAVMHLAAESHVDRAIGSAGEFIRTNIVGTFDLLEAARAYWQQMPSEKREAFRFHHISTDEVYGDLHGTDDLFT----ETTPYAPSSPYSASKAAADHLVRAWQRTYRLPSIVSNCSNNYGPRQFPEK 204          
BLAST of EY744215 vs. ExPASy Swiss-Prot
Match: RFBB_XANCB (dTDP-glucose 4,6-dehydratase OS=Xanthomonas campestris pv. campestris (strain B100) GN=rfbB PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 5.540e-31
Identity = 80/197 (40.61%), Postives = 107/197 (54.31%), Query Frame = 1
Query:   76 LITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK--------VTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNHFPEK 642
            L+TG AGFI  +     +      ++V LD L Y  NL  L   + +++  FVKGDI    LV  LL     D +++FAA++HVD S      F + N+ GT  LLEA +              RF+HVSTDEVYG   E       E +   P +PYSA+KA ++ LV A+  +YGLPV+TT  +N YGP HFPEK
Sbjct:    5 LVTGGAGFIGGNFVLEAVSR--GIRVVNLDALTYAGNLNTLASLEGNADHIFVKGDIGDGALVTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALPDTRRDAFRFLHVSTDEVYGTLGETGKF--TETTPYAPNSPYSASKAASDHLVRAFHHTYGLPVLTTNCSNNYGPYHFPEK 197          
The following BLAST results are available for this feature:
BLAST of EY744215 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
YHEB_SCHPO2.657e-3341.87Uncharacterized protein PB2B2.11 OS=Schizosaccharo... [more]
RFBB_ECOLX3.470e-3340.49dTDP-glucose 4,6-dehydratase OS=Escherichia coli G... [more]
RFBB_NEIMA5.919e-3341.87dTDP-glucose 4,6-dehydratase OS=Neisseria meningit... [more]
SPSJ_BACSU2.938e-3241.15Spore coat polysaccharide biosynthesis protein sps... [more]
RFBB_NEIMB3.837e-3241.38dTDP-glucose 4,6-dehydratase OS=Neisseria meningit... [more]
RFBB_SALTY5.011e-3240.00dTDP-glucose 4,6-dehydratase OS=Salmonella typhimu... [more]
RFBB_ECOLI5.011e-3240.49dTDP-glucose 4,6-dehydratase OS=Escherichia coli (... [more]
RFFG_ECOLI8.548e-3241.87dTDP-glucose 4,6-dehydratase OS=Escherichia coli (... [more]
RFBB_NEIGO1.116e-3140.67dTDP-glucose 4,6-dehydratase OS=Neisseria gonorrho... [more]
RFBB_XANCB5.540e-3140.61dTDP-glucose 4,6-dehydratase OS=Xanthomonas campes... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-B08-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744215 ID=EY744215; Name=EY744215; organism=Citrus sinensis; type=EST; length=967bp
CCACGCGTCCGATTTATGTACTTTTTATCATGTAGAAGTTGATTTGCAAT
GGCTACGTATACCCCGAAGAACATCCTCATCACTGGGGCTGCTGGGTTCA
TTGCTTCCCATGTATGCAACCGGCTGATTCGTAACTATCCCGAGTACAAA
ATTGTTGTGCTTGACAAGCTTGATTATTGTTCGAATCTGAAAAACCTAAT
ACCCTCCAAAGCATCCTCCAACTTTAAGTTTGTTAAGGGGGACATTGCCA
GTGCTGACCTTGTCAACTTTCTTCTCATCACTGAGTCCATTGACACTATT
ATGCACTTTGCTGCGCAAACTCATGTGGACAACTCTTTTGGAAATAGTTT
TGAGTTTACCAAGAACAATATCTATGGTACTCATGTCCTCCTTGAAGCCT
GCAAAGTGACTGGGCAGATCCGGAGGTTCATCCATGTCAGCACAGATGAG
GTCTATGGGGAGACTGACGAGGATGCTGTTGTGGGTAACCATGAAGCTTC
CCAACTCCTGCCAACAAATCCTTATTCTGCAACTAAAGCTGGAGCAGAAA
TGCTTGTTATGGCTTATGGTAGGTCATATGGGCTACCAGTGATTACAACC
CGTGGAAACAATGTTTATGGACCAAATCATTTCCCTGAAAAAACTAAATC
CAAAAGTTTATCCTCTTGGCCATGAAGGGGTTTGCCTCTTTCCCATTCAT
GGGTGATGGGTTCTAATGGGGAAAAGTTTATTTATACTGGGAAGGATGTT
TCCTGAGGCTTTTTGAATGCTTTCCTCTCAAGGGGAAAAAATTGGGCCAT
GTTTTAAAATGTTTGGTACAAAAAAAGGAAAAGGAAAAAGGATTGGATGG
GGGACAAAAAAAATTTTCAAAACTCTTTTCCAAGGGAACCCCCGGAAAAC
AACCATCCAATTTTTGTTAAAAAAAAAAGGGCCCTTTTTAAAAATATAAA
GAAGAGTTATTTTTTTT
back to top