EY744215

Overview
NameEY744215
Unique NameEY744215
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length967
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744215 vs. ExPASy Swiss-Prot
Match: RFBB_XANCP (dTDP-glucose 4,6-dehydratase OS=Xanthomonas campestris pv. campestris GN=rfbB PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 7.236e-31
Identity = 80/197 (40.61%), Postives = 107/197 (54.31%), Query Frame = 1
Query:   76 LITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK--------VTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNHFPEK 642
            L+TG AGFI  +     +      ++V LD L Y  NL  L   + +++  FVKGDI    LV  LL     D +++FAA++HVD S      F + N+ GT  LLEA +              RF+HVSTDEVYG   E       E +   P +PYSA+KA ++ LV A+  +YGLPV+TT  +N YGP HFPEK
Sbjct:    5 LVTGRAGFIGGNFVLEAVSR--GIRVVNLDALTYAGNLNTLASLEGNADHIFVKGDIGDGALVTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALPDTRRDAFRFLHVSTDEVYGTLGETGKF--TETTPYAPNSPYSASKAASDHLVRAFHHTYGLPVLTTNCSNNYGPYHFPEK 197          
BLAST of EY744215 vs. ExPASy Swiss-Prot
Match: RFBB_RHISN (Probable dTDP-glucose 4,6-dehydratase OS=Rhizobium sp. (strain NGR234) GN=NGR_a03580 PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 3.040e-29
Identity = 75/198 (37.88%), Postives = 111/198 (56.06%), Query Frame = 1
Query:   73 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV----TGQIR----RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNHFPEK 642
            IL+TG AGFI S +   L+    E  ++ +DKL Y  NL +L P +   N++F++ DI     +N    T   D ++H AA++HVD S   + +F + N+ GT  +LE  +       Q R    + +HVSTDEVYG   +       E S   P++PYSA+KA ++    A+ R+YGLPV+ +  +N YGP HFPEK
Sbjct:    3 ILVTGGAGFIGSALVRYLVSINAE--VLNVDKLTYAGNLASLKPVEGLRNYRFLRADICDRVAINEAFETFQPDYVIHLAAESHVDRSITGADDFVQTNVNGTFTMLETARQYWSNLSQNRKAFFKMLHVSTDEVYGSLGDRGQF--EEVSPYDPSSPYSASKAASDHFATAWQRTYGLPVVISNCSNNYGPFHFPEK 196          
BLAST of EY744215 vs. ExPASy Swiss-Prot
Match: RMLB_STRMU (dTDP-glucose 4,6-dehydratase OS=Streptococcus mutans GN=rmlB PE=1 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.971e-28
Identity = 77/201 (38.31%), Postives = 115/201 (57.21%), Query Frame = 1
Query:   67 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETD-EDAVVGNHEA--------SQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNHFPEK 642
            KNI++TG AGFI S+  + +  N+P+  + VLDKL Y  N  NL         + V GDIA ++LV+ L      D I+H+AA++H DNS  +   F   N  GT++LLEA +      RF HVSTDEVYG+    + + G+ E         ++  P++PYS+TKA ++++V A+ RS+G+    +  +N YGP    EK
Sbjct:    5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNRANL-EEILGDRVELVVGDIADSELVDKL--AAKADAIVHYAAESHNDNSLKDPSPFIYTNFVGTYILLEAARKYD--IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEK 200          
BLAST of EY744215 vs. ExPASy Swiss-Prot
Match: STRE_STRGR (dTDP-glucose 4,6-dehydratase OS=Streptomyces griseus GN=strE PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.733e-28
Identity = 73/193 (37.82%), Postives = 106/193 (54.92%), Query Frame = 1
Query:   70 NILITGAAGFIASHVCNRLIR--NYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNHFPEK 642
            ++L+TGAAGFI S     L+     P+  +  LD L Y  N  NL   +    ++F +GDI  A       +    D ++H AA++HVD S  ++  F + N++GT  LL+A    G +  F+ VSTDEVYG  +  +     E   L P +PYSA+KA  ++L +A+  S+GL V  TR +N YGP  FPEK
Sbjct:    4 HLLVTGAAGFIGSQYVRTLLGPGGPPDVVVTALDALTYAGNPDNLAAVRGHPRYRFERGDICDAPGRR---VMAGQDQVVHLAAESHVDRSLLDASVFVRTNVHGTQTLLDAATRHG-VASFVQVSTDEVYGSLEHGSWT---EDEPLRPNSPYSASKASGDLLALAHHVSHGLDVRVTRCSNNYGPRQFPEK 189          
BLAST of EY744215 vs. ExPASy Swiss-Prot
Match: RFFG_HAEIN (dTDP-glucose 4,6-dehydratase OS=Haemophilus influenzae GN=rffG PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 7.488e-28
Identity = 77/201 (38.31%), Postives = 109/201 (54.23%), Query Frame = 1
Query:   70 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK--------VTGQIRRFIHVSTDEVYGE--TDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNHFPEK 642
            NIL+TG +GFI S +  R I N+ +  ++ +DKL Y +N   L   + +  + F K DI   +++  +      D +MH AA++HVD S   + +F + NI GT+ LLE  K              RF H+STDEVYG+    E A     E S   P++PYSA+KA +  LV A+ R+YGLPVI T  +N YG     EK
Sbjct:    3 NILVTGGSGFIGSALI-RYIINHTQDFVINIDKLTYAANQSALREVENNPRYVFEKVDICDLNVIENIFEKYQPDAVMHLAAESHVDRSISGAADFVQTNIVGTYTLLEVAKNYWHTLDEAKKTTFRFHHISTDEVYGDLSLSEPAFT---EQSPYHPSSPYSASKAASNHLVQAWHRTYGLPVIITNSSNNYGAYQHAEK 199          
BLAST of EY744215 vs. ExPASy Swiss-Prot
Match: YTCB_BACSU (Uncharacterized UDP-glucose epimerase ytcB OS=Bacillus subtilis GN=ytcB PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.478e-25
Identity = 74/196 (37.76%), Postives = 103/196 (52.55%), Query Frame = 1
Query:   73 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD------YCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFE-FTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNHFPE 639
            IL+TGAAGFI SH+C  L+++     I + D +          NLKNL+P K    F F+K ++ +ADL + L   E +D I H AA   V +S+GN F  +  +NI     LLEAC+    I+ F+  ST  VYGE          E + L P +PY  TK   E L   Y +S+G+P++  R   VYGP   P+
Sbjct:    3 ILVTGAAGFIGSHLCEELLKDKKHNVIGIDDFIGPTPFSLKLKNLKNLLPEK---RFTFIKENLLTADLASLL---EGVDVIFHLAAIPGVRSSWGNHFHPYAAHNIQALQRLLEACR-EHSIQTFVFASTSSVYGEKQGKV----SENTSLSPLSPYGVTKLTGEKLCHVYKQSFGIPIVILRFFTVYGPRQRPD 187          
BLAST of EY744215 vs. ExPASy Swiss-Prot
Match: GALE_BACHD (UDP-glucose 4-epimerase OS=Bacillus halodurans GN=galE PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 5.379e-18
Identity = 63/197 (31.98%), Postives = 94/197 (47.72%), Query Frame = 1
Query:   73 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR--------GNNVYGPNHFPE 639
            IL+TG AG+I SH    L+    +  ++VLD L           + A S+  F  GDI    L++ +  T SIDT++HFAA + V  S     E+ +NN+ GTH LL+   +   +++ +  ST   YGE  +  +    E+   +PTNPY  TK   E +      +YGL  +  R         N   G +H PE
Sbjct:    3 ILVTGGAGYIGSHTVLFLLEQGEQ--VIVLDNLQKGH-------AGALSDVTFYHGDIRDDQLLDTIFTTHSIDTVIHFAANSLVGESVKQPIEYYENNVIGTHTLLKK-MLEHDVKKIVFSSTAATYGEPVQIPI---QESDPTIPTNPYGETKLAIEKMFHWCQEAYGLQYVCLRYFNAAGADPNGRIGEDHSPE 186          
BLAST of EY744215 vs. ExPASy Swiss-Prot
Match: YGAE_ERWAM (Uncharacterized protein in galE 3'region (Fragment) OS=Erwinia amylovora PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.198e-17
Identity = 59/166 (35.54%), Postives = 87/166 (52.41%), Query Frame = 1
Query:   73 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV--------TGQIRRFIHVSTDEVYGET--DEDAVVGNHEASQLLPTNPYSATKA 540
            IL+TG AGFI S V   +I N  +  ++ +DKL Y  NL++L     +    F K DI  ++ +         D +MH AA++HVD S      F + N+ GT+VLLEA ++          +  R  H+STDEV+G+    ED      E +   P++PYSA+KA
Sbjct:    3 ILVTGGAGFIGSAVIRHIINNTDD-TVLNIDKLTYAGNLESLQEISDNPRDHFSKTDICDSESLKRAFNDFEPDVVMHLAAESHVDRSIDGPAAFIETNMIGTYVLLEAARMYWLGLPVERKEAFRLHHISTDEVFGDLHGTEDLFT---EQTAYAPSSPYSASKA 164          
BLAST of EY744215 vs. ExPASy Swiss-Prot
Match: YFNG_BACSU (Putative sugar dehydratase/epimerase yfnG OS=Bacillus subtilis GN=yfnG PE=3 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 1.014e-16
Identity = 57/191 (29.84%), Postives = 90/191 (47.12%), Query Frame = 1
Query:   49 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYG 621
            M+ +  KN+ +TG  G + S++   LI        +V D +       NL   +       V+G +    ++   L    IDT+ H AAQ  V  +  N     + NI GT  +LEAC+    I+R I  S+D+ YG+ +    +   E   L   +PY  +K+ A+++   Y  +YGLPV  TR  N+YG
Sbjct:    1 MSFWKNKNVFVTGCTGLLGSYLVKELIEQGANVTGLVRDHVPQ----SNLYQGEHIKKMNIVRGSLEDLAVIERALGEYEIDTVFHLAAQAIVGVANRNPISTFEANILGTWNILEACRKHPLIKRVIVASSDKAYGDQEN---LPYDENMPLQGKHPYDVSKSCADLISHTYFHTYGLPVCITRCGNLYG 184          
BLAST of EY744215 vs. ExPASy Swiss-Prot
Match: GALE_METJA (Putative UDP-glucose 4-epimerase OS=Methanocaldococcus jannaschii GN=MJ0211 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.325e-16
Identity = 66/192 (34.38%), Postives = 94/192 (48.96%), Query Frame = 1
Query:   73 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADL---VNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNHFPE 639
            IL+TG AGFI SH+ ++LI N   Y +++LD L   +  KN I  KA    +FV  DI   DL   +NF    + ++ ++H AAQ +V NS  N       N+ GT  +LE  +     +     S   VYGE +   V  NH  +   P +PY  +K   E  +  Y R YG+     R +NVYG    P+
Sbjct:    2 ILVTGGAGFIGSHIVDKLIEN--NYDVIILDNLT--TGNKNNINPKA----EFVNADIRDKDLDEKINF----KDVEVVIHQAAQINVRNSVENPVYDGDINVLGTINILEMMRKYDIDKIVFASSGGAVYGEPNYLPVDENHPIN---PLSPYGLSKYVGEEYIKLYNRLYGIEYAILRYSNVYGERQDPK 178          
The following BLAST results are available for this feature:
BLAST of EY744215 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
RFBB_XANCP7.236e-3140.61dTDP-glucose 4,6-dehydratase OS=Xanthomonas campes... [more]
RFBB_RHISN3.040e-2937.88Probable dTDP-glucose 4,6-dehydratase OS=Rhizobium... [more]
RMLB_STRMU1.971e-2838.31dTDP-glucose 4,6-dehydratase OS=Streptococcus muta... [more]
STRE_STRGR5.733e-2837.82dTDP-glucose 4,6-dehydratase OS=Streptomyces grise... [more]
RFFG_HAEIN7.488e-2838.31dTDP-glucose 4,6-dehydratase OS=Haemophilus influe... [more]
YTCB_BACSU3.478e-2537.76Uncharacterized UDP-glucose epimerase ytcB OS=Baci... [more]
GALE_BACHD5.379e-1831.98UDP-glucose 4-epimerase OS=Bacillus halodurans GN=... [more]
YGAE_ERWAM1.198e-1735.54Uncharacterized protein in galE 3'region (Fragment... [more]
YFNG_BACSU1.014e-1629.84Putative sugar dehydratase/epimerase yfnG OS=Bacil... [more]
GALE_METJA1.325e-1634.38Putative UDP-glucose 4-epimerase OS=Methanocaldoco... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-B08-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744215 ID=EY744215; Name=EY744215; organism=Citrus sinensis; type=EST; length=967bp
CCACGCGTCCGATTTATGTACTTTTTATCATGTAGAAGTTGATTTGCAAT
GGCTACGTATACCCCGAAGAACATCCTCATCACTGGGGCTGCTGGGTTCA
TTGCTTCCCATGTATGCAACCGGCTGATTCGTAACTATCCCGAGTACAAA
ATTGTTGTGCTTGACAAGCTTGATTATTGTTCGAATCTGAAAAACCTAAT
ACCCTCCAAAGCATCCTCCAACTTTAAGTTTGTTAAGGGGGACATTGCCA
GTGCTGACCTTGTCAACTTTCTTCTCATCACTGAGTCCATTGACACTATT
ATGCACTTTGCTGCGCAAACTCATGTGGACAACTCTTTTGGAAATAGTTT
TGAGTTTACCAAGAACAATATCTATGGTACTCATGTCCTCCTTGAAGCCT
GCAAAGTGACTGGGCAGATCCGGAGGTTCATCCATGTCAGCACAGATGAG
GTCTATGGGGAGACTGACGAGGATGCTGTTGTGGGTAACCATGAAGCTTC
CCAACTCCTGCCAACAAATCCTTATTCTGCAACTAAAGCTGGAGCAGAAA
TGCTTGTTATGGCTTATGGTAGGTCATATGGGCTACCAGTGATTACAACC
CGTGGAAACAATGTTTATGGACCAAATCATTTCCCTGAAAAAACTAAATC
CAAAAGTTTATCCTCTTGGCCATGAAGGGGTTTGCCTCTTTCCCATTCAT
GGGTGATGGGTTCTAATGGGGAAAAGTTTATTTATACTGGGAAGGATGTT
TCCTGAGGCTTTTTGAATGCTTTCCTCTCAAGGGGAAAAAATTGGGCCAT
GTTTTAAAATGTTTGGTACAAAAAAAGGAAAAGGAAAAAGGATTGGATGG
GGGACAAAAAAAATTTTCAAAACTCTTTTCCAAGGGAACCCCCGGAAAAC
AACCATCCAATTTTTGTTAAAAAAAAAAGGGCCCTTTTTAAAAATATAAA
GAAGAGTTATTTTTTTT
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