EY744215

Overview
NameEY744215
Unique NameEY744215
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length967
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744215 vs. ExPASy Swiss-Prot
Match: ARAE3_ARATH (Probable UDP-arabinose 4-epimerase 3 OS=Arabidopsis thaliana GN=At4g20460 PE=2 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 6.575e-16
Identity = 55/189 (29.10%), Postives = 96/189 (50.79%), Query Frame = 1
Query:   70 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDY-----CSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYG 621
            ++L+TG AG+I SH   RL+++   Y++ ++D L          L+ L P       +F+  D+  A  V+ +    + D +MHFAA  +V  S  +  ++  N    T V+LEA     ++++ I+ ST   YGE D+  +V   E +  +P NPY   K  AE +++ + ++  + V+  R  NV G
Sbjct:   71 HVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNLGAVKVLQGLFPEPG--RLQFIYADLGDAKAVDKIFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLEAV-ARHKVKKLIYSSTCATYGEPDKMPIV---EVTPQVPINPYGKAKKMAEDMILDFSKNSDMAVMILRYFNVIG 251          
BLAST of EY744215 vs. ExPASy Swiss-Prot
Match: GALE_STRLI (UDP-glucose 4-epimerase OS=Streptomyces lividans GN=galE PE=3 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 1.122e-15
Identity = 60/185 (32.43%), Postives = 94/185 (50.81%), Query Frame = 1
Query:   76 LITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITE-SIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPN 627
            L+TG AG++ S V   L+    E  +VVL  L   +  +  +P+ AS    F +GDI   D +  +     S D ++HFAA + V  S     ++  NN+ GT  LLEA +  G +RR +  ST   YGE ++  +V   E++   PTNPY A+K   + ++     ++GL  ++    NV G N
Sbjct:    6 LVTGGAGYVGSVVAQHLVEAGNE--VVVLHNLS--TGFRAGVPAGAS----FYRGDIRDQDFMRKVFRGRLSFDGVLHFAAFSQVGESVVKPEKYWDNNVGGTMALLEAMRGAG-VRRLVFSSTAATYGEPEQVPIV---ESAPTRPTNPYGASKLAVDHMITGEAAAHGLGAVSVPYFNVAGAN 178          
BLAST of EY744215 vs. ExPASy Swiss-Prot
Match: Y1055_METJA (Uncharacterized protein MJ1055 OS=Methanocaldococcus jannaschii GN=MJ1055 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.263e-15
Identity = 60/196 (30.61%), Postives = 96/196 (48.98%), Query Frame = 1
Query:   67 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN-----LKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNHFPE 639
            KNIL+TG+AGFI  H+   L+ NY + K++ +D L+   N      +N I  K   N+ F+K D +  D +   L  + ID I+H  AQ  V  S  N + + K+N  GT  + E  +    I + ++ S+  VYG   +     +    +  P + Y++TK   E++   Y   YG+ +I  R   VYG    P+
Sbjct:    4 KNILVTGSAGFIGFHLSKYLMDNYEDLKVIGIDNLNNYYNPVLKEKRNEI-LKNYENYTFIKLDFSDWDDLVENLKDKEIDLIVHLGAQAGVRYSLQNPWAYIKSNEMGTLNIFEFAR-RFDIEKVVYASSSSVYGGNRKIPFSEDDRVDK--PISLYASTKRSNELMAHVYHHLYGIKMIGLRFFTVYGEYGRPD 195          
BLAST of EY744215 vs. ExPASy Swiss-Prot
Match: GALE_CORDI (UDP-glucose 4-epimerase OS=Corynebacterium diphtheriae GN=galE PE=3 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 3.263e-15
Identity = 56/183 (30.60%), Postives = 98/183 (53.55%), Query Frame = 1
Query:   73 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYG 621
            +L+TG AG++ S VC+ ++     +++ ++D L   +  ++ +P  A+    FV+GDI   D+ + +L ++S D ++HFAA++ V  S     E+ ++N+  T  LL+A K    +R  +  ST   YGE +   +    E +   PTNPY ATK   +  + +Y  +YG    + R  NV G
Sbjct:    3 LLVTGGAGYVGS-VCSTVLLEQG-HEVTIVDNLT--TGNRDAVPLGAT----FVEGDIK--DVADNVLSSDSFDAVLHFAARSLVGESVEKPDEYWQHNMVTTLALLDAMK-RNNVRNIVFSSTAATYGEPETVPIT---EDAPTHPTNPYGATKLSIDYAITSYAHAYGFAATSLRYFNVAG 171          
BLAST of EY744215 vs. ExPASy Swiss-Prot
Match: ARAE1_ARATH (UDP-arabinose 4-epimerase 1 OS=Arabidopsis thaliana GN=MUR4 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.566e-15
Identity = 55/189 (29.10%), Postives = 92/189 (48.68%), Query Frame = 1
Query:   70 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN-----LKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYG 621
            ++L+TG AG+I SH   RL++    Y++ ++D L   +      L+ L P       +F+  D+  A  VN +    + D +MHFAA  +V  S     ++  N    T V+LE     G ++  I+ ST   YGE D   ++   E +  +P NPY   K  AE +++ + ++  + V+  R  NV G
Sbjct:   72 HVLVTGGAGYIGSHAALRLLKE--SYRVTIVDNLSRGNLAAVRILQELFPEPG--RLQFIYADLGDAKAVNKIFTENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVLETMAAHG-VKTLIYSSTCATYGEPD---IMPITEETPQVPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIG 252          
BLAST of EY744215 vs. ExPASy Swiss-Prot
Match: ARAE2_ARATH (Putative UDP-arabinose 4-epimerase 2 OS=Arabidopsis thaliana GN=At2g34850 PE=2 SV=3)

HSP 1 Score: 81.6481 bits (200), Expect = 7.270e-15
Identity = 54/189 (28.57%), Postives = 93/189 (49.21%), Query Frame = 1
Query:   70 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDY-----CSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYG 621
            ++L+TG AG+I SH   RL+++   Y++ ++D L          L+ L P       +F+  D+  A+ VN +    + D +MHFAA  +V  S     ++  N    T V+LE     G ++  I+ ST   YGE ++  +    E +  +P NPY   K  AE +++ + ++  + V+  R  NV G
Sbjct:   71 HVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNLGAVKILQQLFPEPGK--LQFIYADLGDANAVNKIFSENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVLETMAAHG-VKTLIYSSTCATYGEPEKMPIT---EETPQVPINPYGKAKKMAEDIILDFSKNSIMAVMILRYFNVIG 251          
BLAST of EY744215 vs. ExPASy Swiss-Prot
Match: ARAE2_ORYSJ (Probable UDP-arabinose 4-epimerase 2 OS=Oryza sativa subsp. japonica GN=UEL-2 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.620e-14
Identity = 56/189 (29.63%), Postives = 89/189 (47.09%), Query Frame = 1
Query:   70 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN-----LKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYG 621
            ++L+TG AG+I SH   RL+R+   Y++ ++D L   +      L+ L P       +F+  D+  A  VN +    + D +MHFAA  +V  S      +  N    T  +LEA      ++  I+ ST   YGE D   +    EA+   P NPY   K  AE +++ + +   + V+  R  NV G
Sbjct:   51 HVLVTGGAGYIGSHATLRLLRD--NYRVTIVDNLSRGNMGAVRVLQRLFPEPG--RLQFIYADLGDAKAVNKIFSENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLTVLEA-MAAYNVKTLIYSSTCATYGEPDTMPIT---EATPQNPINPYGKAKKMAEDIILDFSKRSEMAVMILRYFNVIG 231          
BLAST of EY744215 vs. ExPASy Swiss-Prot
Match: RFBE_SALTI (CDP-paratose 2-epimerase OS=Salmonella typhi GN=rfbE PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 2.115e-14
Identity = 57/200 (28.50%), Postives = 94/200 (47.00%), Query Frame = 1
Query:   73 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDE-------------DAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNHF 633
            +LITG  GF+ S++ +  +    +  ++V D L       NL    +  NF+FV GDI + + V  L+     D+  H A Q  +  S  N     + N+ GT  LLEA +        I+ ST++VYG+ ++             D   G  E++QL   +PY  +K  A+  ++ Y R +GL  +  R +++YG   F
Sbjct:    3 LLITGGCGFLGSNLASFALSQGID--LIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQF 200          
BLAST of EY744215 vs. ExPASy Swiss-Prot
Match: EXOB_AZOBR (UDP-glucose 4-epimerase OS=Azospirillum brasilense GN=exoB PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.115e-14
Identity = 59/189 (31.22%), Postives = 90/189 (47.62%), Query Frame = 1
Query:   55 TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYG 621
            T     +L+TG AG+I SHV + L         V +D  D  +  +  IP+        V+GDI SA+L++ ++    +D +MHFA    V  S     ++ +NN   +  LL AC   G I + +  ST  VYG  +    V   E +  +P NPY A+K   E ++   G ++GL  +  R  NV G
Sbjct:    5 TAASPRVLVTGGAGYIGSHVLHALTD--AGIPAVTID--DLSAGRREAIPAAVP----LVEGDIGSAELLDRVMRDHRVDAVMHFAGSIVVPESVVKPLDYYRNNTANSLTLLGACLRAG-IDKVVFSSTAAVYGAPES---VPIREDAPTVPINPYGASKLMTEQMLRDAGAAHGLRSVILRYFNVAG 181          
BLAST of EY744215 vs. ExPASy Swiss-Prot
Match: GALE_ECOLI (UDP-glucose 4-epimerase OS=Escherichia coli (strain K12) GN=galE PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.608e-14
Identity = 50/165 (30.30%), Postives = 88/165 (53.33%), Query Frame = 1
Query:   73 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFK---FVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLV 558
            +L+TG +G+I SH C +L++N   + +++LD L  C++ ++++P       K   FV+GDI +  L+  +L   +IDT++HFA    V  S     E+  NN+ GT  L+ A +    ++ FI  S+  VYG+  +   V +       P +PY  +K   E ++
Sbjct:    3 VLVTGGSGYIGSHTCVQLLQN--GHDVIILDNL--CNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMR-AANVKNFIFSSSATVYGDQPKIPYVESFPTG--TPQSPYGKSKLMVEQIL 160          
The following BLAST results are available for this feature:
BLAST of EY744215 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
ARAE3_ARATH6.575e-1629.10Probable UDP-arabinose 4-epimerase 3 OS=Arabidopsi... [more]
GALE_STRLI1.122e-1532.43UDP-glucose 4-epimerase OS=Streptomyces lividans G... [more]
Y1055_METJA3.263e-1530.61Uncharacterized protein MJ1055 OS=Methanocaldococc... [more]
GALE_CORDI3.263e-1530.60UDP-glucose 4-epimerase OS=Corynebacterium diphthe... [more]
ARAE1_ARATH5.566e-1529.10UDP-arabinose 4-epimerase 1 OS=Arabidopsis thalian... [more]
ARAE2_ARATH7.270e-1528.57Putative UDP-arabinose 4-epimerase 2 OS=Arabidopsi... [more]
ARAE2_ORYSJ1.620e-1429.63Probable UDP-arabinose 4-epimerase 2 OS=Oryza sati... [more]
RFBE_SALTI2.115e-1428.50CDP-paratose 2-epimerase OS=Salmonella typhi GN=rf... [more]
EXOB_AZOBR2.115e-1431.22UDP-glucose 4-epimerase OS=Azospirillum brasilense... [more]
GALE_ECOLI3.608e-1430.30UDP-glucose 4-epimerase OS=Escherichia coli (strai... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-B08-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744215 ID=EY744215; Name=EY744215; organism=Citrus sinensis; type=EST; length=967bp
CCACGCGTCCGATTTATGTACTTTTTATCATGTAGAAGTTGATTTGCAAT
GGCTACGTATACCCCGAAGAACATCCTCATCACTGGGGCTGCTGGGTTCA
TTGCTTCCCATGTATGCAACCGGCTGATTCGTAACTATCCCGAGTACAAA
ATTGTTGTGCTTGACAAGCTTGATTATTGTTCGAATCTGAAAAACCTAAT
ACCCTCCAAAGCATCCTCCAACTTTAAGTTTGTTAAGGGGGACATTGCCA
GTGCTGACCTTGTCAACTTTCTTCTCATCACTGAGTCCATTGACACTATT
ATGCACTTTGCTGCGCAAACTCATGTGGACAACTCTTTTGGAAATAGTTT
TGAGTTTACCAAGAACAATATCTATGGTACTCATGTCCTCCTTGAAGCCT
GCAAAGTGACTGGGCAGATCCGGAGGTTCATCCATGTCAGCACAGATGAG
GTCTATGGGGAGACTGACGAGGATGCTGTTGTGGGTAACCATGAAGCTTC
CCAACTCCTGCCAACAAATCCTTATTCTGCAACTAAAGCTGGAGCAGAAA
TGCTTGTTATGGCTTATGGTAGGTCATATGGGCTACCAGTGATTACAACC
CGTGGAAACAATGTTTATGGACCAAATCATTTCCCTGAAAAAACTAAATC
CAAAAGTTTATCCTCTTGGCCATGAAGGGGTTTGCCTCTTTCCCATTCAT
GGGTGATGGGTTCTAATGGGGAAAAGTTTATTTATACTGGGAAGGATGTT
TCCTGAGGCTTTTTGAATGCTTTCCTCTCAAGGGGAAAAAATTGGGCCAT
GTTTTAAAATGTTTGGTACAAAAAAAGGAAAAGGAAAAAGGATTGGATGG
GGGACAAAAAAAATTTTCAAAACTCTTTTCCAAGGGAACCCCCGGAAAAC
AACCATCCAATTTTTGTTAAAAAAAAAAGGGCCCTTTTTAAAAATATAAA
GAAGAGTTATTTTTTTT
back to top