EY744215

Overview
NameEY744215
Unique NameEY744215
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length967
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744215 vs. ExPASy Swiss-Prot
Match: GAE1_ARATH (UDP-glucuronate 4-epimerase 1 OS=Arabidopsis thaliana GN=GAE1 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.608e-14
Identity = 61/188 (32.45%), Postives = 86/188 (45.74%), Query Frame = 1
Query:   70 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD--YCSNLKNLIPSKASSNFKFV-KGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGP 624
            ++L+TGA GF+ SHV   L +      +V LD  +  Y  +LK    S  SS   FV +GD+  A L+  L    +   +MH AAQ  V  +  N   +  +NI G   LLE CK        +  S+  VYG  ++     +    Q  P + Y+ATK   E +   Y   YGL +   R   VYGP
Sbjct:   89 SVLVTGATGFVGSHVSLALRKRGDG--VVGLDNFNNYYDPSLKRARRSLLSSRGIFVVEGDLNDAKLLAKLFDVVAFTHVMHLAAQAGVRYALENPQSYVHSNIAGLVNLLEICKAANPQPAIVWASSSSVYGLNEKVPFSESDRTDQ--PASLYAATKKAGEEITHTYNHIYGLAITGLRFFTVYGP 272          
BLAST of EY744215 vs. ExPASy Swiss-Prot
Match: GALE_SALTY (UDP-glucose 4-epimerase OS=Salmonella typhimurium GN=galE PE=3 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 6.154e-14
Identity = 50/165 (30.30%), Postives = 87/165 (52.73%), Query Frame = 1
Query:   73 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFK---FVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLV 558
            +L+TG +G+I SH C +L++N   + +V+LD L  C++ ++++P       K   FV+GDI +  L+  +L   +IDT++HFA    V  S     E+  NN+ GT  L+ A +    ++  I  S+  VYG+  +   V +       P +PY  +K   E ++
Sbjct:    3 VLVTGGSGYIGSHTCVQLLQN--GHDVVILDNL--CNSKRSVLPVIERLGGKHPTFVEGDIRNEALITEILHDHAIDTVIHFAGLKAVGESVARPLEYYDNNVNGTLRLVSAMR-AANVKNLIFSSSATVYGDQPKIPYVESFPTG--TPQSPYGKSKLMVEQIL 160          
BLAST of EY744215 vs. ExPASy Swiss-Prot
Match: GALE_SALTI (UDP-glucose 4-epimerase OS=Salmonella typhi GN=galE PE=3 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 6.154e-14
Identity = 50/165 (30.30%), Postives = 87/165 (52.73%), Query Frame = 1
Query:   73 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFK---FVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLV 558
            +L+TG +G+I SH C +L++N   + +V+LD L  C++ ++++P       K   FV+GDI +  L+  +L   +IDT++HFA    V  S     E+  NN+ GT  L+ A +    ++  I  S+  VYG+  +   V +       P +PY  +K   E ++
Sbjct:    3 VLVTGGSGYIGSHTCVQLLQN--GHDVVILDNL--CNSKRSVLPVIERLGGKHPTFVEGDIRNEALITEILHDHAIDTVIHFAGLKAVGESVAKPLEYYDNNVNGTLRLVSAMR-AANVKNLIFSSSATVYGDQPKIPYVESFPTG--TPQSPYGKSKLMVEQIL 160          
BLAST of EY744215 vs. ExPASy Swiss-Prot
Match: ARAE3_ORYSJ (Probable UDP-arabinose 4-epimerase 3 OS=Oryza sativa subsp. japonica GN=UEL-3 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 8.038e-14
Identity = 55/190 (28.95%), Postives = 93/190 (48.95%), Query Frame = 1
Query:   70 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN-----LKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS-YGLPVITTRGNNVYG 621
            ++L+TG AG+I SH   RL+++   Y++ ++D L   +      L+ L P       +F+  D+     VN +    + D +MHFAA  +V  S      +  N    T ++LEA    G ++  I+ ST   YGE ++  +V   E ++ LP NPY   K  AE +++ + +    + V+  R  NV G
Sbjct:   65 HVLVTGGAGYIGSHASLRLLKD--NYRVTIVDNLSRGNMGAVKVLQELFPQPG--RLQFIYADLGDQKTVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLLILEAMASHG-VKTLIYSSTCATYGEPEKMPIV---ETTRQLPINPYGKAKKMAEDIILDFTKGRKDMAVMILRYFNVIG 246          
BLAST of EY744215 vs. ExPASy Swiss-Prot
Match: CAPI_STAAU (Protein capI OS=Staphylococcus aureus GN=capI PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.050e-13
Identity = 57/187 (30.48%), Postives = 90/187 (48.13%), Query Frame = 1
Query:   73 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD--YCSNLK-NLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGP 624
            ILITG AGFI SH+  +LI+    + ++ +D ++  Y  +LK + + S    NF F K  + + D ++ + + E  + +++ AAQ  V  S  N   +  +NI G   +LE C     I+  I+ S+  VYG         +       P + Y+ATK   E++   Y   Y LP    R   VYGP
Sbjct:    3 ILITGTAGFIGSHLAKKLIKQ--GHYVIGVDSINDYYSVSLKEDRLKSIGKENFTFNKVKLENYDDLSKVFVDEQPEVVVNLAAQAGVRYSIENPRTYIDSNIVGFMNILE-CSRHFNIQNLIYASSSSVYGANTSKPFSTSDNIDH--PLSLYAATKKSNELMAHTYSHLYNLPTTGLRFFTVYGP 184          
BLAST of EY744215 vs. ExPASy Swiss-Prot
Match: GALE_YERPE (UDP-glucose 4-epimerase OS=Yersinia pestis GN=galE PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.791e-13
Identity = 51/165 (30.91%), Postives = 82/165 (49.70%), Query Frame = 1
Query:   73 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNL---IPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLV 558
            +L+TG +G+I SH C +LI     YK V+LD L  C++  ++   I S      +   GDI    L++ +     I  ++HFA    V  S     E+  NN++GT VLLEA +   Q++  I  S+  VYG+  +   V +       P++PY  +K   E ++
Sbjct:    3 VLVTGGSGYIGSHTCVQLIE--AGYKPVILDNL--CNSKSSVLARIHSLTGYTPELYAGDIRDRTLLDSIFAAHPIHAVIHFAGLKAVGESVNRPLEYYNNNVFGTLVLLEAMR-AAQVKNLIFSSSATVYGDQPQIPYVESFPTGS--PSSPYGRSKLMVEQIL 160          
BLAST of EY744215 vs. ExPASy Swiss-Prot
Match: GALE_BACSU (UDP-glucose 4-epimerase OS=Bacillus subtilis GN=galE PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.791e-13
Identity = 50/163 (30.67%), Postives = 79/163 (48.47%), Query Frame = 1
Query:   73 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCS-NLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLV 558
            IL+TG AG+I SH C  L+ +   Y+IVVLD L   S    N +      +  F + D+   + V+ +     I+ ++HFA    V  S     ++  NN+ GT +L EA +  G +++ +  S+  VYG  +   +    E   L  TNPY  TK   E ++
Sbjct:    3 ILVTGGAGYIGSHTCVELLNS--GYEIVVLDNLSNSSAEALNRVKEITGKDLTFYEADLLDREAVDSVFAENEIEAVIHFAGLKAVGESVAIPLKYYHNNLTGTFILCEAMEKYG-VKKIVFSSSATVYGVPETSPIT---EDFPLGATNPYGQTKLMLEQIL 159          
BLAST of EY744215 vs. ExPASy Swiss-Prot
Match: ARAE4_ARATH (Putative UDP-arabinose 4-epimerase 4 OS=Arabidopsis thaliana GN=At5g44480 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.791e-13
Identity = 52/189 (27.51%), Postives = 92/189 (48.68%), Query Frame = 1
Query:   70 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD-----YCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYG 621
            ++L+TG AG+I SH   RL+R+   Y++ ++D L          L+ L P   +   +F+  D+     V  +    + D +MHFAA  +V  S     ++  N    T  +LEA     ++++ I+ ST   YGE ++  +    E +  +P NPY   K  AE +++ + ++  + V+  R  NV G
Sbjct:   96 HVLVTGGAGYIGSHAALRLLRD--SYRVTIVDNLSRGNLGAVKTLQQLFPQ--TGRLQFIYADLGDPLAVEKIFSENAFDAVMHFAAVAYVGESTLYPLKYYHNITSNTLGVLEA-MARHKVKKLIYSSTCATYGEPEKMPIT---EDTPQVPINPYGKAKKMAEDMILDFSKNSDMAVMILRYFNVIG 276          
BLAST of EY744215 vs. ExPASy Swiss-Prot
Match: GALE_LACCA (UDP-glucose 4-epimerase OS=Lactobacillus casei GN=galE PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 3.054e-13
Identity = 61/197 (30.96%), Postives = 92/197 (46.70%), Query Frame = 1
Query:   73 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNV--------YGPNHFPE 639
            I + G AG+I SH   +L+    +  +VVLD L   +  +  +  +A    +F +GDI     ++ +   E ID I+HFAA + V  S  +  ++  NN  G   LLEA    G I++ +  ST   YGE  +   V   E    +PTNPY  +K   E ++     +YGL  +  R  NV         G +H PE
Sbjct:    3 IAVLGGAGYIGSHTVKQLLAAGED--VVVLDNL--ITGHRKAVDPRA----RFYQGDIRDYHFLSQVFSQEKIDGIVHFAAFSIVPESMKDPLKYFDNNTGGMITLLEAMNQFG-IKKIVFSSTAATYGEPKQ---VPIKETDPQVPTNPYGESKLAMEKIMHWADVAYGLKFVALRYFNVAGAMPDGSIGEDHHPE 187          
BLAST of EY744215 vs. ExPASy Swiss-Prot
Match: GAE4_ARATH (UDP-glucuronate 4-epimerase 4 OS=Arabidopsis thaliana GN=GAE4 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.989e-13
Identity = 59/187 (31.55%), Postives = 83/187 (44.39%), Query Frame = 1
Query:   73 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD--YCSNLKNLIPSKAS-SNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGP 624
            +L+TGAAGF+ +HV   L R      ++ LD  +  Y  +LK    +    S    V+GDI   +L+  L    S   +MH AAQ  V  +  N   +  +NI G   LLE CK        +  S+  VYG   +       +  Q  P + Y+ATK   E +   Y   YGL +   R   VYGP
Sbjct:   99 VLVTGAAGFVGTHVSAALKRRGDG--VIGLDNFNDYYDPSLKRARRALLERSGIFIVEGDINDVELLRKLFKIVSFTHVMHLAAQAGVRYAMENPSSYVHSNIAGFVNLLEICKSVNPQPAIVWASSSSVYGLNTKVPFSEKDKTDQ--PASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGP 281          
The following BLAST results are available for this feature:
BLAST of EY744215 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
GAE1_ARATH3.608e-1432.45UDP-glucuronate 4-epimerase 1 OS=Arabidopsis thali... [more]
GALE_SALTY6.154e-1430.30UDP-glucose 4-epimerase OS=Salmonella typhimurium ... [more]
GALE_SALTI6.154e-1430.30UDP-glucose 4-epimerase OS=Salmonella typhi GN=gal... [more]
ARAE3_ORYSJ8.038e-1428.95Probable UDP-arabinose 4-epimerase 3 OS=Oryza sati... [more]
CAPI_STAAU1.050e-1330.48Protein capI OS=Staphylococcus aureus GN=capI PE=3... [more]
GALE_YERPE1.791e-1330.91UDP-glucose 4-epimerase OS=Yersinia pestis GN=galE... [more]
GALE_BACSU1.791e-1330.67UDP-glucose 4-epimerase OS=Bacillus subtilis GN=ga... [more]
ARAE4_ARATH1.791e-1327.51Putative UDP-arabinose 4-epimerase 4 OS=Arabidopsi... [more]
GALE_LACCA3.054e-1330.96UDP-glucose 4-epimerase OS=Lactobacillus casei GN=... [more]
GAE4_ARATH3.989e-1331.55UDP-glucuronate 4-epimerase 4 OS=Arabidopsis thali... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-B08-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744215 ID=EY744215; Name=EY744215; organism=Citrus sinensis; type=EST; length=967bp
CCACGCGTCCGATTTATGTACTTTTTATCATGTAGAAGTTGATTTGCAAT
GGCTACGTATACCCCGAAGAACATCCTCATCACTGGGGCTGCTGGGTTCA
TTGCTTCCCATGTATGCAACCGGCTGATTCGTAACTATCCCGAGTACAAA
ATTGTTGTGCTTGACAAGCTTGATTATTGTTCGAATCTGAAAAACCTAAT
ACCCTCCAAAGCATCCTCCAACTTTAAGTTTGTTAAGGGGGACATTGCCA
GTGCTGACCTTGTCAACTTTCTTCTCATCACTGAGTCCATTGACACTATT
ATGCACTTTGCTGCGCAAACTCATGTGGACAACTCTTTTGGAAATAGTTT
TGAGTTTACCAAGAACAATATCTATGGTACTCATGTCCTCCTTGAAGCCT
GCAAAGTGACTGGGCAGATCCGGAGGTTCATCCATGTCAGCACAGATGAG
GTCTATGGGGAGACTGACGAGGATGCTGTTGTGGGTAACCATGAAGCTTC
CCAACTCCTGCCAACAAATCCTTATTCTGCAACTAAAGCTGGAGCAGAAA
TGCTTGTTATGGCTTATGGTAGGTCATATGGGCTACCAGTGATTACAACC
CGTGGAAACAATGTTTATGGACCAAATCATTTCCCTGAAAAAACTAAATC
CAAAAGTTTATCCTCTTGGCCATGAAGGGGTTTGCCTCTTTCCCATTCAT
GGGTGATGGGTTCTAATGGGGAAAAGTTTATTTATACTGGGAAGGATGTT
TCCTGAGGCTTTTTGAATGCTTTCCTCTCAAGGGGAAAAAATTGGGCCAT
GTTTTAAAATGTTTGGTACAAAAAAAGGAAAAGGAAAAAGGATTGGATGG
GGGACAAAAAAAATTTTCAAAACTCTTTTCCAAGGGAACCCCCGGAAAAC
AACCATCCAATTTTTGTTAAAAAAAAAAGGGCCCTTTTTAAAAATATAAA
GAAGAGTTATTTTTTTT
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