EY744215

Overview
NameEY744215
Unique NameEY744215
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length967
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744215 vs. ExPASy Swiss-Prot
Match: ARAE1_ORYSJ (Probable UDP-arabinose 4-epimerase 1 OS=Oryza sativa subsp. japonica GN=UEL-1 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 6.804e-13
Identity = 54/191 (28.27%), Postives = 90/191 (47.12%), Query Frame = 1
Query:   70 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN-----LKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS--YGLPVITTRGNNVYG 621
            ++L+TG AG+I SH   RL+++   +++ ++D L   +      L+NL         +F+  D+     VN +    + D +MHFAA  +V  S      +  N    T V+LEA      +R  I+ ST   YGE ++  +    E +   P NPY   K  AE +++ + +S    + V+  R  NV G
Sbjct:   74 HVLVTGGAGYIGSHAALRLLKD--SFRVTIVDNLSRGNMGAIKVLQNLFSEPG--RLQFIYADLGDPKAVNRIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVVLEA-MAAHNVRTLIYSSTCATYGEPEKMPIT---EGTPQFPINPYGKAKKMAEDIILDFSKSKKADMAVMILRYFNVIG 256          
BLAST of EY744215 vs. ExPASy Swiss-Prot
Match: GAE3_ARATH (UDP-glucuronate 4-epimerase 3 OS=Arabidopsis thaliana GN=GAE3 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.161e-12
Identity = 59/188 (31.38%), Postives = 83/188 (44.15%), Query Frame = 1
Query:   70 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD--YCSNLKNLIPSKASSNFKFV-KGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGP 624
            ++L+TGAAGF+ +HV   L R      ++ LD  +  Y  +LK    +    +  FV +GDI  A L+  L        +MH AAQ  V  +  N   +  +NI G   LLE CK        +  S+  VYG   +          Q  P + Y+ATK   E +   Y   YGL +   R   VYGP
Sbjct:   92 SVLVTGAAGFVGTHVSAALKRRGDG--VLGLDNFNDYYDPSLKRARQALLERSGVFVVEGDINDAALLKKLFEVVPFTHVMHLAAQAGVRYAMENPSSYVHSNIAGFVNLLEVCKSANPQPAIVWASSSSVYGLNTKVPFSEKDRTDQ--PASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGP 275          
BLAST of EY744215 vs. ExPASy Swiss-Prot
Match: GALE_LACHE (UDP-glucose 4-epimerase OS=Lactobacillus helveticus GN=galE PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.516e-12
Identity = 56/183 (30.60%), Postives = 87/183 (47.54%), Query Frame = 1
Query:   73 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYG 621
            +L+ G AG+I SH    L++   +  ++VLD L Y  + K + P       KF +GDI    LV+ +L  E ID +MHFAA + V  S     ++  NN+ G   LL+A      ++  +  S+   YG   +  +    E + L P NPY  TK   E ++    ++ G+     R  NV G
Sbjct:    3 VLVIGGAGYIGSHAVRELVKEGND--VLVLDAL-YTGHRKAVDPKA-----KFYQGDIEDTFLVSKILRDEKIDAVMHFAAYSLVPESVKKPLKYYDNNVTGMISLLQAMN-DANVKYLVFSSSAATYGIPKKLPIT---EDTPLNPINPYGETKMMMEKIMAWADKADGIKYTALRYFNVAG 173          
BLAST of EY744215 vs. ExPASy Swiss-Prot
Match: GALE_STRMU (UDP-glucose 4-epimerase OS=Streptococcus mutans GN=galE PE=3 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.980e-12
Identity = 56/184 (30.43%), Postives = 89/184 (48.37%), Query Frame = 1
Query:   73 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLL-ITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYG 621
            IL+ G AG+I SH+ +RLI    E ++VV+D L    +   + P+      KF +GD+A  + ++ +      +D ++HFAA + V  S     ++  NN  G   LLE     G ++  +  ST   YG  DE  +    E +   P NPY  +K   E ++    R+YG+  +  R  NV G
Sbjct:    3 ILVLGGAGYIGSHMVDRLIEK-GEEEVVVVDSL-VTGHRAAVHPAA-----KFYQGDLADREFMSMVFRENPDVDAVIHFAAYSLVAESMKKPLKYFDNNTAGMIKLLEVMSEFG-VKYIVFSSTAATYGIPDEIPI---KETTPQRPINPYGESKLMMETIMKWSDRAYGIKFVPLRYFNVAG 175          
BLAST of EY744215 vs. ExPASy Swiss-Prot
Match: GAE6_ARATH (UDP-glucuronate 4-epimerase 6 OS=Arabidopsis thaliana GN=GAE6 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.980e-12
Identity = 57/188 (30.32%), Postives = 82/188 (43.62%), Query Frame = 1
Query:   70 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD--YCSNLKNLIPSKASSNFKF-VKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGP 624
            ++L+TGAAGF+ SH C+  +R   +  ++  D  +  Y  +LK            F V+GD+    L+  L        I+H AAQ  V  +  N   +  +NI G   LLE  K        +  S+  VYG   E+     H   Q  P + Y+ATK   E +   Y   YGL +   R   VYGP
Sbjct:  113 SVLVTGAAGFVGSH-CSLALRKRGD-GVLGFDNFNDYYDPSLKRARQELLEKQQVFIVEGDLNDGPLLRKLFDVVPFTHILHLAAQAGVRYAMKNPQSYIASNIAGFVNLLEVAKAANPQPAIVWASSSSVYGLNTENPFSEEHRTDQ--PASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGP 296          
BLAST of EY744215 vs. ExPASy Swiss-Prot
Match: GAE2_ARATH (UDP-glucuronate 4-epimerase 2 OS=Arabidopsis thaliana GN=GAE2 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.980e-12
Identity = 61/200 (30.50%), Postives = 87/200 (43.50%), Query Frame = 1
Query:   34 RS*FAMATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD--YCSNLKNLIPSKASSNFKF-VKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGP 624
            RS   + T    ++L+TGAAGF+ +HV   L R      ++ LD  +  Y ++LK    +    +  F V+GDI    L+  L        +MH AAQ  V  +  N   +  +NI G   LLE CK        +  S+  VYG   +          Q  P + Y+ATK   E +   Y   YGL +   R   VYGP
Sbjct:   81 RSSARVRTRNGVSVLVTGAAGFVGTHVSAALKRRGDG--VLGLDNFNDYYDTSLKRSRQALLERSGVFIVEGDINDLSLLKKLFEVVPFTHVMHLAAQAGVRYAMENPGSYVHSNIAGFVNLLEVCKSANPQPAIVWASSSSVYGLNTKVPFSEKDRTDQ--PASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGP 276          
BLAST of EY744215 vs. ExPASy Swiss-Prot
Match: EXOB_RHIME (UDP-glucose 4-epimerase OS=Rhizobium meliloti GN=exoB PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.377e-12
Identity = 62/190 (32.63%), Postives = 81/190 (42.63%), Query Frame = 1
Query:   70 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVK------GDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYG 621
            NIL+ G AG+I SH C +L      Y+ VV D L             ++ + +FVK      GDI     ++ +L       I+HFAA   V  S  +   F  NN+ GT  LL A    G I  F+  ST   YG  D    V   E+ +  P NPY  TK   E  +  YG   GL  +  R  N  G
Sbjct:    5 NILVVGGAGYIGSHTCLQLAAK--GYQPVVYDNL-------------SNGHEEFVKWGVLEKGDIRDRQRLDEVLARHKPRAILHFAAMIEVGESVKDPAAFYDNNVIGTLTLLSAALAAG-IDAFVFSSTCATYGLPDS---VPMDESHKQAPINPYGRTKWICEQALKDYGLYKGLRSVILRYFNAAG 175          
BLAST of EY744215 vs. ExPASy Swiss-Prot
Match: GALE_MYCPN (UDP-glucose 4-epimerase OS=Mycoplasma pneumoniae GN=galE PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.410e-12
Identity = 56/206 (27.18%), Postives = 97/206 (47.09%), Query Frame = 1
Query:   61 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESI-----DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYG-PNHFPEKTKSKSL 660
            T   +L+ G  G+I S   ++L++ YP+  + V+D +++ S    L+P + + +F          +L++   +T++I     D + HFAA+T V  S      +  +N+ GT  LL A K   +  +    ST  V+G      +  N    + L +NPY  +K  +E+++    RS    VI  R  NV G  N F    K+ +L
Sbjct:    4 TKSKVLVLGGLGYIGSCFIDQLLKQYPDVTVSVID-INHTSLALQLLPRQVNVHF---------VNLLDRAQLTDTIAQINPDVVFHFAAKTSVKESTEQPLTYFDHNLVGTLNLLHALKELQKPIQLFFSSTAAVFGSASTLPIPENLVLEETLASNPYGISKFLSEIVLQTLTRSPHFQVIALRYFNVAGASNPFGNFNKNTTL 199          
BLAST of EY744215 vs. ExPASy Swiss-Prot
Match: GALE_STRTR (UDP-glucose 4-epimerase OS=Streptococcus thermophilus GN=galE PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 7.523e-12
Identity = 55/196 (28.06%), Postives = 92/196 (46.94%), Query Frame = 1
Query:   73 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLL-ITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNHFPEKTKSKS 657
            IL+ G AG+I SH+ +RL+    E K+VV+D L    +   + P        F +GD++  D +  +      +D ++HFAA + V  S     ++  NN  G   LLE     G ++  +  ST   YG  +E  ++   E +   P NPY  +K   E ++    ++YG+  +  R  NV G N      +++S
Sbjct:    3 ILVLGGAGYIGSHMVDRLVEKGQE-KVVVVDSL-VTGHRAAVHPDAI-----FYQGDLSDQDFMRKVFKENPDVDAVIHFAAYSLVGESMEKPLKYFDNNTAGMVKLLEVMNECG-VKYIVFSSTAATYGIPEEIPIL---ETTPQNPINPYGESKLMMETIMKWSDQAYGIKYVPLRYFNVAGANLMVRLVRTRS 187          
BLAST of EY744215 vs. ExPASy Swiss-Prot
Match: GALE_KLEPN (UDP-glucose 4-epimerase (Fragment) OS=Klebsiella pneumoniae GN=galE PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.825e-12
Identity = 40/133 (30.08%), Postives = 73/133 (54.89%), Query Frame = 1
Query:   73 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP---SKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGE 462
            +L+TG +G+I SH C +L++    +++V+LD L  C++ + ++P           F++GDI +   +  +L   +I+ ++HFA    V  S     E+  NN+ GT  L+ A +  G ++ FI  S+  VYG+
Sbjct:    3 VLVTGGSGYIGSHTCVQLLQR--GHEVVILDNL--CNSKRRILPVIERLGGKEATFIEGDIRNEARMTEILHDHAIEAVIHFAGLKAVGESVAKPLEYYDNNVTGTLKLVSAMRAAG-VKNFIFSSSATVYGD 130          
The following BLAST results are available for this feature:
BLAST of EY744215 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
ARAE1_ORYSJ6.804e-1328.27Probable UDP-arabinose 4-epimerase 1 OS=Oryza sati... [more]
GAE3_ARATH1.161e-1231.38UDP-glucuronate 4-epimerase 3 OS=Arabidopsis thali... [more]
GALE_LACHE1.516e-1230.60UDP-glucose 4-epimerase OS=Lactobacillus helveticu... [more]
GALE_STRMU1.980e-1230.43UDP-glucose 4-epimerase OS=Streptococcus mutans GN... [more]
GAE6_ARATH1.980e-1230.32UDP-glucuronate 4-epimerase 6 OS=Arabidopsis thali... [more]
GAE2_ARATH1.980e-1230.50UDP-glucuronate 4-epimerase 2 OS=Arabidopsis thali... [more]
EXOB_RHIME3.377e-1232.63UDP-glucose 4-epimerase OS=Rhizobium meliloti GN=e... [more]
GALE_MYCPN4.410e-1227.18UDP-glucose 4-epimerase OS=Mycoplasma pneumoniae G... [more]
GALE_STRTR7.523e-1228.06UDP-glucose 4-epimerase OS=Streptococcus thermophi... [more]
GALE_KLEPN9.825e-1230.08UDP-glucose 4-epimerase (Fragment) OS=Klebsiella p... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-B08-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744215 ID=EY744215; Name=EY744215; organism=Citrus sinensis; type=EST; length=967bp
CCACGCGTCCGATTTATGTACTTTTTATCATGTAGAAGTTGATTTGCAAT
GGCTACGTATACCCCGAAGAACATCCTCATCACTGGGGCTGCTGGGTTCA
TTGCTTCCCATGTATGCAACCGGCTGATTCGTAACTATCCCGAGTACAAA
ATTGTTGTGCTTGACAAGCTTGATTATTGTTCGAATCTGAAAAACCTAAT
ACCCTCCAAAGCATCCTCCAACTTTAAGTTTGTTAAGGGGGACATTGCCA
GTGCTGACCTTGTCAACTTTCTTCTCATCACTGAGTCCATTGACACTATT
ATGCACTTTGCTGCGCAAACTCATGTGGACAACTCTTTTGGAAATAGTTT
TGAGTTTACCAAGAACAATATCTATGGTACTCATGTCCTCCTTGAAGCCT
GCAAAGTGACTGGGCAGATCCGGAGGTTCATCCATGTCAGCACAGATGAG
GTCTATGGGGAGACTGACGAGGATGCTGTTGTGGGTAACCATGAAGCTTC
CCAACTCCTGCCAACAAATCCTTATTCTGCAACTAAAGCTGGAGCAGAAA
TGCTTGTTATGGCTTATGGTAGGTCATATGGGCTACCAGTGATTACAACC
CGTGGAAACAATGTTTATGGACCAAATCATTTCCCTGAAAAAACTAAATC
CAAAAGTTTATCCTCTTGGCCATGAAGGGGTTTGCCTCTTTCCCATTCAT
GGGTGATGGGTTCTAATGGGGAAAAGTTTATTTATACTGGGAAGGATGTT
TCCTGAGGCTTTTTGAATGCTTTCCTCTCAAGGGGAAAAAATTGGGCCAT
GTTTTAAAATGTTTGGTACAAAAAAAGGAAAAGGAAAAAGGATTGGATGG
GGGACAAAAAAAATTTTCAAAACTCTTTTCCAAGGGAACCCCCGGAAAAC
AACCATCCAATTTTTGTTAAAAAAAAAAGGGCCCTTTTTAAAAATATAAA
GAAGAGTTATTTTTTTT
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