EY744210

Overview
NameEY744210
Unique NameEY744210
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744210 vs. ExPASy Swiss-Prot
Match: RL14_PYRKO (50S ribosomal protein L14P OS=Pyrococcus kodakaraensis GN=rpl14p PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.898e-30
Identity = 69/141 (48.94%), Postives = 97/141 (68.79%), Query Frame = 2
Query:   26 MSKRGRGGSAG-NKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 445
            M+K+G G + G +  R +  LP+ A +  ADN+GAK + II V G KG   RL +A VGDMV+ATVKKG+PD+R +V+ AV+VRQRK +RR DG+ + FEDNA  IV P+G  +G+ I G I +E A+ W R+ S A+ ++
Sbjct:    1 MAKKGAGATRGISPVRPTRALPIGAYLKVADNSGAKVIQIIGVVGYKGTRRRLAAAGVGDMVVATVKKGRPDMRHQVVRAVVVRQRKEYRRLDGMRVKFEDNAAAIVTPEGVPRGTEIRGAIAREAAERWVRLGSIASIVL 141          
BLAST of EY744210 vs. ExPASy Swiss-Prot
Match: RL14_METMP (50S ribosomal protein L14P OS=Methanococcus maripaludis GN=rpl14p PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.898e-30
Identity = 64/120 (53.33%), Postives = 84/120 (70.00%), Query Frame = 2
Query:   83 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAI 442
            LP  A + CADNTGAK L +I+VK   G + RLP+  VG MV  +VKKG P++RK+V+PA+I+RQ+K +RR DG  + FEDNA VIV P+G  KGS I GP+ KE A+ WP ++  A  I
Sbjct:   12 LPNGARLVCADNTGAKELEVIAVKNYVGTVRRLPAGGVGHMVFVSVKKGTPEMRKQVLPAIIIRQKKEYRRADGTRVKFEDNAAVIVTPEGTPKGSEIKGPVSKEAAERWPGVSRLAKII 131          
BLAST of EY744210 vs. ExPASy Swiss-Prot
Match: RL14_METM7 (50S ribosomal protein L14P OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rpl14p PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.479e-30
Identity = 64/120 (53.33%), Postives = 84/120 (70.00%), Query Frame = 2
Query:   83 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAI 442
            LP  A + CADNTGAK L II+VK   G + RLP+  VG MV  +VKKG P++RK+V+PA+I+RQ+K ++R DG  + FEDNA VIV P+G  KGS I GP+ KE A+ WP ++  A  I
Sbjct:   12 LPNGARLVCADNTGAKELEIIAVKNYTGTVRRLPAGGVGHMVFVSVKKGTPEMRKQVLPAIIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSEIKGPVSKEAAERWPGVSRLAKII 131          
BLAST of EY744210 vs. ExPASy Swiss-Prot
Match: RL14_META3 (50S ribosomal protein L14P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rpl14p PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.479e-30
Identity = 65/120 (54.17%), Postives = 84/120 (70.00%), Query Frame = 2
Query:   83 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAI 442
            LP  A + CADNTGAK L II+VKG KG   RLP+  VG +V  +VKKG P++RK+V+PA+I+RQ+K +RR DG  + FEDNA VIV P+G  KGS I GP+ KE A+ W  ++  A  I
Sbjct:   12 LPNGARLICADNTGAKELEIIAVKGYKGVARRLPAGGVGSLVFVSVKKGTPEMRKQVLPAIIIRQKKEYRRPDGSRVKFEDNAAVIVTPEGSPKGSEIKGPVAKEAAERWAGVSRLAKII 131          
BLAST of EY744210 vs. ExPASy Swiss-Prot
Match: RL14_METM6 (50S ribosomal protein L14P OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rpl14p PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 3.237e-30
Identity = 63/120 (52.50%), Postives = 84/120 (70.00%), Query Frame = 2
Query:   83 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAI 442
            LP  A + CADNTGAK L +I+VK   G + RLP+  VG MV  +VKKG P++RK+V+PA+I+RQ+K ++R DG  + FEDNA VIV P+G  KGS I GP+ KE A+ WP ++  A  I
Sbjct:   12 LPNGARLVCADNTGAKELEVIAVKNYTGTVRRLPAGGVGHMVFVSVKKGTPEMRKQVLPAIIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSEIKGPVSKEAAERWPGVSRLAKII 131          
BLAST of EY744210 vs. ExPASy Swiss-Prot
Match: RL14_METS5 (50S ribosomal protein L14P OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rpl14p PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.228e-30
Identity = 63/115 (54.78%), Postives = 84/115 (73.04%), Query Frame = 2
Query:  101 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 445
            VN +DN+GAK   IISV G +G L R+P A VGD+VM +V+KG PD+RK+   AV++RQR P+RR DG ++ F+DNA VIVNP G  KG+ I GP+ +E A+ WP++AS A  IV
Sbjct:   24 VNVSDNSGAKEAMIISVFGYRGALRRVPYANVGDLVMVSVRKGAPDVRKQKFKAVVIRQRMPFRRPDGTWISFDDNAVVIVNPDGTAKGTEIRGPVAREAAERWPKVASLATLIV 138          
BLAST of EY744210 vs. ExPASy Swiss-Prot
Match: RL14_METM5 (50S ribosomal protein L14P OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rpl14p PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.228e-30
Identity = 63/120 (52.50%), Postives = 84/120 (70.00%), Query Frame = 2
Query:   83 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAI 442
            LP  A + CADNTGAK L +I+VK   G + RLP+  VG MV  +VKKG P++RK+V+PA+I+RQ+K ++R DG  + FEDNA VIV P+G  KGS I GP+ KE A+ WP ++  A  I
Sbjct:   12 LPNGARLVCADNTGAKELEVIAVKNYVGTVRRLPAGGVGHMVFVSVKKGTPEMRKQVLPAIIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSEIKGPVSKEAAERWPGVSRLAKII 131          
BLAST of EY744210 vs. ExPASy Swiss-Prot
Match: RL14_IGNH4 (50S ribosomal protein L14P OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rpl14p PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.228e-30
Identity = 67/134 (50.00%), Postives = 91/134 (67.91%), Query Frame = 2
Query:   50 SAGNKFRMSL--GLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 445
            ++ NK R  +  GL V + V   DN+GAK   II V G  GRL R+P A VGDMV+ TVKKG P++R +V+ A++VRQRKP+RR DG ++ FEDNA VIV+  G  +GS I GP+ +E  + WPRI + A+ +V
Sbjct:    4 ASANKSRRKVVTGLQVGSYVKVTDNSGAKVAMIIGVPGYHGRLRRIPPAGVGDMVVVTVKKGTPEMRHQVVRAIVVRQRKPFRRPDGTWVAFEDNAVVIVSEDGTPRGSEIRGPVAREAVERWPRIGNVASIVV 137          
BLAST of EY744210 vs. ExPASy Swiss-Prot
Match: RL14_SULSO (50S ribosomal protein L14P OS=Sulfolobus solfataricus GN=rpl14p PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.098e-29
Identity = 64/130 (49.23%), Postives = 88/130 (67.69%), Query Frame = 2
Query:   56 GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 445
            G++  ++  L   + VN ADN+G K   II V G +G L R+P A + DMVM ++KKG P++RK+   AVIVRQR P+RR DG ++ FEDNA VI+NP G  KG+ + GPI +E A+ WP+IAS A  +V
Sbjct:    9 GSRKGLTPALQHYSVVNVADNSGGKEAMIIGVYGYRGVLRRVPFANIADMVMVSIKKGTPEVRKQKFRAVIVRQRMPYRRPDGTWISFEDNAVVIINPDGTPKGTEVRGPIAREAAERWPKIASLATLVV 138          
BLAST of EY744210 vs. ExPASy Swiss-Prot
Match: RL14_ARCFU (50S ribosomal protein L14P OS=Archaeoglobus fulgidus GN=rpl14p PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.674e-29
Identity = 66/121 (54.55%), Postives = 86/121 (71.07%), Query Frame = 2
Query:   83 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 445
            LP  A + CADNTGA+ L II+VKG KG   R P+A VGD+V+ TVKKG P++RK+V  AVIVRQRK +RR DG  + FEDNA VI N +GE +GS I G + +E A+ + +I + A+ IV
Sbjct:   12 LPTGARLVCADNTGARELEIIAVKGYKGVRRRYPAAGVGDIVVVTVKKGTPEIRKQVHYAVIVRQRKEYRRPDGTRVKFEDNAAVITNERGEPRGSEIRGAVAREAAERFSKIGTIASVIV 132          
The following BLAST results are available for this feature:
BLAST of EY744210 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 379
Match NameE-valueIdentityDescription
RL14_PYRKO1.898e-3048.9450S ribosomal protein L14P OS=Pyrococcus kodakarae... [more]
RL14_METMP1.898e-3053.3350S ribosomal protein L14P OS=Methanococcus maripa... [more]
RL14_METM72.479e-3053.3350S ribosomal protein L14P OS=Methanococcus maripa... [more]
RL14_META32.479e-3054.1750S ribosomal protein L14P OS=Methanococcus aeolic... [more]
RL14_METM63.237e-3052.5050S ribosomal protein L14P OS=Methanococcus maripa... [more]
RL14_METS54.228e-3054.7850S ribosomal protein L14P OS=Metallosphaera sedul... [more]
RL14_METM54.228e-3052.5050S ribosomal protein L14P OS=Methanococcus maripa... [more]
RL14_IGNH44.228e-3050.0050S ribosomal protein L14P OS=Ignicoccus hospitali... [more]
RL14_SULSO2.098e-2949.2350S ribosomal protein L14P OS=Sulfolobus solfatari... [more]
RL14_ARCFU4.674e-2954.5550S ribosomal protein L14P OS=Archaeoglobus fulgid... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-B03-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744210 ID=EY744210; Name=EY744210; organism=Citrus sinensis; type=EST; length=901bp
CACGCGTCCGCCTTTAGCTGCGAAAATGTCGAAGCGAGGACGTGGAGGAT
CAGCAGGTAACAAGTTCAGGATGTCACTGGGTTTGCCAGTGGCAGCAACT
GTGAACTGTGCTGACAACACTGGGGCAAAGAACCTTTACATCATCTCAGT
TAAGGGAATCAAAGGTCGCCTCAACCGTTTGCCGTCTGCCTGTGTTGGAG
ACATGGTTATGGCTACCGTGAAGAAAGGGAAGCCTGATCTTAGGAAGAAG
GTGATGCCCGCCGTCATTGTAAGGCAGCGCAAGCCATGGCGCAGAAAGGA
TGGTGTCTTCATGTACTTTGAAGATAATGCTGGTGTTATTGTGAATCCAA
AGGGAGAAATGAAGGGTTCTGCCATCACCGGTCCAATTGGTAAAGAGTGT
GCTGATTTGTGGCCGAGAATTGCAAGTGCAGCCAATGCTATCGTTTAAGA
CATTCAAGACCGATAACCTATATCATCCTTTTTGTTGCACTAAAAAGAAA
TCTGGTGAAGTTTCATAGTAGGAAGGAGTAAAGCTTTTCTGTGAACTTTC
TGTATGATTTTGTTATTCTAGTTTTGTAAGTGGTAAGAAAGTTTGGAGTT
TTGTTGATCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
GGGCGGGCCCCTCCTAAAGAACCCAACCTTAAGTACCCCGTTGCATGCCA
ACGTCCAAACCTCTTCTAAAAGTGGCCCCCTAAATTCAATTTCCCGGGGC
CCTCCTTTTTTAAACCGTCCTGAAGGGGGAAAACCCCTGGGGGTTTCCCC
AACTTTAATCCCCCTTGGCAAACAATCCCCCCTTTTCCCCCCCCGGGGGG
GAAAAAAAGAAAAAAAGGGCCCCCCCCCGATTCCCCCCCTTCCCCCAAAA
T
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