EY744210

Overview
NameEY744210
Unique NameEY744210
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744210 vs. ExPASy Swiss-Prot
Match: RL14_PYRIL (50S ribosomal protein L14P OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rpl14p PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.714e-27
Identity = 65/144 (45.14%), Postives = 95/144 (65.97%), Query Frame = 2
Query:   26 MSKRGRGGSAGNKFRMSL--GLPVAATVNCADNTGAKNLYIISVKGIKGRL--NRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 445
            M+KRG   + G  +R  +  G+ + + V  ADN+GA+ + +I V G   +    R+P A VGDMV+  V++GKP+LRK++  A++VRQR+P+RR DG ++ FEDNA VIV P+G+ KGS I GP+  E    WP IA+ A+ IV
Sbjct:    1 MAKRGGKRTVGVSYRFHVTPGIFLNSLVPVADNSGARLVRVIGVVGHYSKTVHRRIPGAGVGDMVVVVVREGKPELRKQIFRAIVVRQRRPYRRPDGTWVAFEDNAVVIVTPEGDPKGSEIHGPVAMEATLRWPTIANLASIIV 144          
BLAST of EY744210 vs. ExPASy Swiss-Prot
Match: RL14_PYRAR (50S ribosomal protein L14P OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rpl14p PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 9.747e-27
Identity = 64/144 (44.44%), Postives = 95/144 (65.97%), Query Frame = 2
Query:   26 MSKRGRGGSAG--NKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRL--NRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 445
            M+KRG   + G   +F ++ G+ + + V  ADN+GAK + +I V G   +    R+P A VGDMV+  VK+GKP+LR+++   ++VRQR+P+RR DG ++ FEDNA VIV P+G+ KGS I GP+  E    WP IA+ A+ +V
Sbjct:    1 MAKRGGKRTVGVPYRFHVTPGIFMNSLVPVADNSGAKLVRVIGVVGHYSKTVHRRIPGAGVGDMVVVVVKEGKPELRRQIFRGIVVRQRRPYRRPDGTWVAFEDNAVVIVTPEGDPKGSEIHGPVAMEATLRWPTIANLASIVV 144          
BLAST of EY744210 vs. ExPASy Swiss-Prot
Match: RL14_METBF (50S ribosomal protein L14P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rpl14p PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.171e-26
Identity = 62/130 (47.69%), Postives = 89/130 (68.46%), Query Frame = 2
Query:   56 GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 445
            G +  +   L   A V C DNTGAK + IISVK  +G  NR+P A +GDM + +VKKG P++RK+V+ AV+VRQ++ +RR DG+ + FEDNA VI + +G  KG+ I GPI +E A+ +P+I + A+ IV
Sbjct:    3 GIRSNIPRALNAGAKVPCVDNTGAKVVEIISVKKYRGVKNRMPCAGIGDMCVVSVKKGTPEMRKQVLLAVVVRQKQEFRRPDGLRVSFEDNAMVITDEEGIPKGTDIKGPIAREVAERYPKIGTTASIIV 132          
BLAST of EY744210 vs. ExPASy Swiss-Prot
Match: RL14_METAC (50S ribosomal protein L14P OS=Methanosarcina acetivorans GN=rpl14p PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.171e-26
Identity = 60/130 (46.15%), Postives = 89/130 (68.46%), Query Frame = 2
Query:   56 GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 445
            G +  +   L   A + C DNTGAK + IISVK  +G  NR+P A +GDM + +VKKG P++RK+V+ AV+VRQ++ +RR DG+ + FEDNA VI + +G  KG+ I GP+ +E A+ +P+I + A+ IV
Sbjct:    3 GMRSNIPRALNAGAQIACVDNTGAKVVEIISVKKYRGVKNRMPCAGIGDMCVVSVKKGTPEMRKQVLLAVVVRQKQEFRRPDGLHVSFEDNAMVITDEEGIPKGTDIKGPVAREVAERFPKIGTTASIIV 132          
BLAST of EY744210 vs. ExPASy Swiss-Prot
Match: RL14_METMA (50S ribosomal protein L14P OS=Methanosarcina mazei GN=rpl14p PE=3 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 6.318e-26
Identity = 59/130 (45.38%), Postives = 88/130 (67.69%), Query Frame = 2
Query:   56 GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 445
            G +  +   L   A + C DNTGAK + IISVK  +G  NR+P A +GDM + +VKKG P++RK+++ AV+VRQ++ +RR DG+ + FEDNA VI +  G  KG+ I GP+ +E A+ +P+I + A+ IV
Sbjct:    3 GIRSNIPRALNAGAQIACVDNTGAKVVEIISVKKYRGVKNRMPCAGIGDMCVVSVKKGTPEMRKQILLAVVVRQKQEFRRPDGLHVSFEDNAMVITDEDGIPKGTDIKGPVAREVAERFPKIGTTASIIV 132          
BLAST of EY744210 vs. ExPASy Swiss-Prot
Match: RL14_HALMA (50S ribosomal protein L14P OS=Haloarcula marismortui GN=rpl14p PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.318e-26
Identity = 59/122 (48.36%), Postives = 81/122 (66.39%), Query Frame = 2
Query:   80 GLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 445
            GL   + + CADNTGA+ L +ISV G  G  NR P A +GD +  +V KG P++R++V+ AV+VRQRKP RR DG  + FEDNA VIV+   + +G+ + GPI +E A  +  +ASAA  IV
Sbjct:   11 GLEKGSLITCADNTGARELKVISVHGYSGTKNRHPKAGLGDKITVSVTKGTPEMRRQVLEAVVVRQRKPIRRPDGTRVKFEDNAAVIVDENEDPRGTELKGPIAREVAQRFGSVASAATMIV 132          
BLAST of EY744210 vs. ExPASy Swiss-Prot
Match: RL14_HALLT (50S ribosomal protein L14P OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=rpl14p PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.318e-26
Identity = 60/128 (46.88%), Postives = 84/128 (65.62%), Query Frame = 2
Query:   62 KFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 445
            K  ++ GL   + + CADNTGA+ L +ISV G  G  NR P A +GD V  +V KG P++R++V+ AV+VRQRKP RR +G  + FEDNA VI++   E +G+ I GP+ +E A+ +  IAS A  IV
Sbjct:    5 KADVTQGLSKGSLITCADNTGARELKVISVAGYSGTKNRHPKAGIGDKVTVSVTKGTPEMRRQVLEAVVVRQRKPIRRPNGTRVKFEDNAAVIIDDLDEPRGTEIKGPVAREVAERFGSIASTATMIV 132          
BLAST of EY744210 vs. ExPASy Swiss-Prot
Match: RL14_HALWD (50S ribosomal protein L14P OS=Haloquadratum walsbyi (strain DSM 16790) GN=rpl14p PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 8.251e-26
Identity = 63/128 (49.22%), Postives = 83/128 (64.84%), Query Frame = 2
Query:   62 KFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 445
            K  ++ GL   + V CADNTGA+ L +ISV G  G  NR P A +GD V  +V KG P++R++V+ AVIVRQRK  RR DG  + FEDNA VI++   E +G+ I GPI +E A+ +  IAS A  IV
Sbjct:    5 KADVTKGLERGSLVTCADNTGARELKVISVMGSSGTKNRHPKAGIGDQVTVSVTKGTPEMRRQVLEAVIVRQRKSIRRPDGTRVKFEDNAAVIIDEMEEPRGTEIKGPIAREVAERFGSIASTATMIV 132          
BLAST of EY744210 vs. ExPASy Swiss-Prot
Match: RL14_NATPD (50S ribosomal protein L14P OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rpl14p PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 4.095e-25
Identity = 56/122 (45.90%), Postives = 80/122 (65.57%), Query Frame = 2
Query:   80 GLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 445
            GL   + + CADNTGA+ L + S+ G  G  NR P A +GD +  +V KG P++R++V+ AV++RQRKP RR DG  + FEDNA VIV+   + +G+ + GPI +E A+ +  IAS A  IV
Sbjct:   11 GLEKGSLITCADNTGARELKVTSISGYSGTKNRHPKAGLGDKITVSVTKGTPEMRRQVLEAVVIRQRKPIRRPDGTRVKFEDNAAVIVDENEDPRGTELKGPIAREVAERFGSIASTATIIV 132          
BLAST of EY744210 vs. ExPASy Swiss-Prot
Match: RL14_METB6 (50S ribosomal protein L14P OS=Methanoregula boonei (strain 6A8) GN=rpl14p PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 9.122e-25
Identity = 61/144 (42.36%), Postives = 88/144 (61.11%), Query Frame = 2
Query:   14 LAAKMSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 445
            + AK SK  R  + G K            + CADNTGA+ + I+SV G  G   R P   +GD+   TVKKG PD+RKK++ AV++RQ+K  RR +G+ + F+DNA V+V+ K E KG+ I GP+ +E A+ +P++ S A  IV
Sbjct:    1 MKAKQSKTPRALATGTK------------LTCADNTGARIVQIVSVFGYHGVRRRQPKMGLGDIATVTVKKGTPDMRKKLVRAVVIRQKKEMRRPNGLRVSFDDNAVVVVDEKNEPKGTEIKGPVAREVAERYPKLGSMATIIV 132          
The following BLAST results are available for this feature:
BLAST of EY744210 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 379
Match NameE-valueIdentityDescription
RL14_PYRIL5.714e-2745.1450S ribosomal protein L14P OS=Pyrobaculum islandic... [more]
RL14_PYRAR9.747e-2744.4450S ribosomal protein L14P OS=Pyrobaculum arsenati... [more]
RL14_METBF2.171e-2647.6950S ribosomal protein L14P OS=Methanosarcina barke... [more]
RL14_METAC2.171e-2646.1550S ribosomal protein L14P OS=Methanosarcina aceti... [more]
RL14_METMA6.318e-2645.3850S ribosomal protein L14P OS=Methanosarcina mazei... [more]
RL14_HALMA6.318e-2648.3650S ribosomal protein L14P OS=Haloarcula marismort... [more]
RL14_HALLT6.318e-2646.8850S ribosomal protein L14P OS=Halorubrum lacusprof... [more]
RL14_HALWD8.251e-2649.2250S ribosomal protein L14P OS=Haloquadratum walsby... [more]
RL14_NATPD4.095e-2545.9050S ribosomal protein L14P OS=Natronomonas pharaon... [more]
RL14_METB69.122e-2542.3650S ribosomal protein L14P OS=Methanoregula boonei... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-B03-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744210 ID=EY744210; Name=EY744210; organism=Citrus sinensis; type=EST; length=901bp
CACGCGTCCGCCTTTAGCTGCGAAAATGTCGAAGCGAGGACGTGGAGGAT
CAGCAGGTAACAAGTTCAGGATGTCACTGGGTTTGCCAGTGGCAGCAACT
GTGAACTGTGCTGACAACACTGGGGCAAAGAACCTTTACATCATCTCAGT
TAAGGGAATCAAAGGTCGCCTCAACCGTTTGCCGTCTGCCTGTGTTGGAG
ACATGGTTATGGCTACCGTGAAGAAAGGGAAGCCTGATCTTAGGAAGAAG
GTGATGCCCGCCGTCATTGTAAGGCAGCGCAAGCCATGGCGCAGAAAGGA
TGGTGTCTTCATGTACTTTGAAGATAATGCTGGTGTTATTGTGAATCCAA
AGGGAGAAATGAAGGGTTCTGCCATCACCGGTCCAATTGGTAAAGAGTGT
GCTGATTTGTGGCCGAGAATTGCAAGTGCAGCCAATGCTATCGTTTAAGA
CATTCAAGACCGATAACCTATATCATCCTTTTTGTTGCACTAAAAAGAAA
TCTGGTGAAGTTTCATAGTAGGAAGGAGTAAAGCTTTTCTGTGAACTTTC
TGTATGATTTTGTTATTCTAGTTTTGTAAGTGGTAAGAAAGTTTGGAGTT
TTGTTGATCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
GGGCGGGCCCCTCCTAAAGAACCCAACCTTAAGTACCCCGTTGCATGCCA
ACGTCCAAACCTCTTCTAAAAGTGGCCCCCTAAATTCAATTTCCCGGGGC
CCTCCTTTTTTAAACCGTCCTGAAGGGGGAAAACCCCTGGGGGTTTCCCC
AACTTTAATCCCCCTTGGCAAACAATCCCCCCTTTTCCCCCCCCGGGGGG
GAAAAAAAGAAAAAAAGGGCCCCCCCCCGATTCCCCCCCTTCCCCCAAAA
T
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