EY744210

Overview
NameEY744210
Unique NameEY744210
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744210 vs. ExPASy Swiss-Prot
Match: RL14_LEIXX (50S ribosomal protein L14 OS=Leifsonia xyli subsp. xyli GN=rplN PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.108e-13
Identity = 47/102 (46.08%), Postives = 62/102 (60.78%), Query Frame = 2
Query:  110 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 406
            ADNTGAK L  I V G  GR      A +GD+++ATVK   P    K   V+ AVIVR RK  RR DG ++ F++NA VI+   G+ +G+ I GP+G+E  D
Sbjct:   11 ADNTGAKELLTIRVLGGSGRRY----AGLGDVIVATVKDAIPGGNVKKGDVVKAVIVRTRKNTRRTDGSYIKFDENAAVILKNDGDPRGTRIFGPVGRELRD 108          
BLAST of EY744210 vs. ExPASy Swiss-Prot
Match: RL14_BEUC1 (50S ribosomal protein L14 OS=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) GN=rplN PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.108e-13
Identity = 48/116 (41.38%), Postives = 68/116 (58.62%), Query Frame = 2
Query:  110 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD-LWPRIASAANAIV 445
            ADNTGAK +  I V G  GR      A +GD+++ATVK   P     R  V+ AV+VR  K  RR DG ++ F++NA V++   GE +G+ I GP+G+E  D  + RI S A  ++
Sbjct:   11 ADNTGAKEILCIRVLGGSGRRY----AGIGDVIVATVKDAIPGGNVKRGDVVKAVVVRTAKERRRPDGSYIRFDENAAVLLKSDGEPRGTRIFGPVGRELRDKKFMRIVSLAPEVI 122          
BLAST of EY744210 vs. ExPASy Swiss-Prot
Match: RL14_ACAM1 (50S ribosomal protein L14 OS=Acaryochloris marina (strain MBIC 11017) GN=rplN PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.108e-13
Identity = 45/106 (42.45%), Postives = 64/106 (60.38%), Query Frame = 2
Query:   98 TVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 406
            T+N ADN+GAK L  I V G   R        VGD+++ATVK   P++  K   V+ AVIVR RK   R+ G+ + F+DNA V++NP G  +G+ + GP+ +E  D
Sbjct:    7 TLNVADNSGAKRLLCIRVIGGGNRRY----GGVGDVIIATVKDATPNMPVKKSDVVRAVIVRTRKSICRESGMSIRFDDNAAVLINPDGNPRGTRVFGPVARELRD 108          
BLAST of EY744210 vs. ExPASy Swiss-Prot
Match: RK14_STAPU (50S ribosomal protein L14, chloroplastic OS=Staurastrum punctulatum GN=rpl14 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.108e-13
Identity = 44/119 (36.97%), Postives = 72/119 (60.50%), Query Frame = 2
Query:  101 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL-WPRIASAANAIV 445
            +N ADN+GA+ L  I V G   R      A +GDM++A VK+  P++   + +V+ AVIVR  K  +R +G+ + F+DNA V+VN +G  +G+ + GP+ +E  D  + +I S A  ++
Sbjct:    8 LNVADNSGARRLMCIRVLGSSNR----KYANIGDMIIAVVKEAVPNMPLKKSEVVRAVIVRTCKGIKRNNGMILRFDDNAAVVVNQEGNPRGTRVFGPVARELRDFNFTKIVSLAPEVL 122          
BLAST of EY744210 vs. ExPASy Swiss-Prot
Match: RL14_GRAFK (50S ribosomal protein L14 OS=Gramella forsetii (strain KT0803) GN=rplN PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.753e-13
Identity = 45/102 (44.12%), Postives = 63/102 (61.76%), Query Frame = 2
Query:  110 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 406
            ADNTGAK +  I V G  G   R  S  VGD ++ +VK+  P+   K   V  AV+VR RK  RR DG ++ F+DNA V++ P+GEM+G+ + GP+ +E  D
Sbjct:   11 ADNTGAKEVLAIRVLG--GTKKRYAS--VGDKIVVSVKEATPNGSIKKGAVSTAVVVRTRKEVRRPDGSYIRFDDNACVLLGPQGEMRGTRVFGPVARELRD 108          
BLAST of EY744210 vs. ExPASy Swiss-Prot
Match: RL14_DESVM (50S ribosomal protein L14 OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=rplN PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.753e-13
Identity = 47/108 (43.52%), Postives = 66/108 (61.11%), Query Frame = 2
Query:   83 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 397
            + V +T+  ADN+GAK +  I V G  G   R   A VGD+V+ +VK+  P  + K   VM AVIVR RK  RR DG ++ F+ NA V++N +GE  G+ I GP+ +E
Sbjct:    2 IQVESTLQVADNSGAKKVACIKVLG--GSKRRY--ATVGDIVVVSVKEALPHCKVKKGDVMQAVIVRTRKEVRRVDGSYIKFDSNAAVLLNKQGEPVGTRIFGPVARE 105          
BLAST of EY744210 vs. ExPASy Swiss-Prot
Match: RK14_CHLRE (50S ribosomal protein L14, chloroplastic OS=Chlamydomonas reinhardtii GN=rpl14 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.753e-13
Identity = 43/105 (40.95%), Postives = 65/105 (61.90%), Query Frame = 2
Query:  101 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 406
            +N ADN+GA+ L  I   G   R     SA +GD+++A VK   P++   R  ++ AVIVR RK  RR++G+ + F+DNA VI+N +G  +G+ + GPI +E  D
Sbjct:    8 LNVADNSGARELMCIRALGGSYR----ESANIGDVIIAVVKDALPNMPVKRSDIVRAVIVRTRKGIRRENGMAIRFDDNAAVIINKEGNPRGTRVFGPIARELRD 108          
BLAST of EY744210 vs. ExPASy Swiss-Prot
Match: RK14_ADICA (50S ribosomal protein L14, chloroplastic OS=Adiantum capillus-veneris GN=rpl14 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.753e-13
Identity = 42/125 (33.60%), Postives = 77/125 (61.60%), Query Frame = 2
Query:   83 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL-WPRIASAANAIV 445
            + + + ++ ADN+GA+ L  I V G   R      A +GD+++A VK+  P++   R +V+ AV+VR R+  +R++G+ + F+DNA VI+N +G  +G+ I GP+ +E  +  + R+ S A  ++
Sbjct:    2 IQIQSYLDVADNSGARKLMCIRVLGTGNR----KYADIGDIIIAVVKEAVPNMFLKRSEVVRAVVVRTRRGLKRRNGMVLEFDDNAAVIINQEGNPRGTRIFGPVARELRECNFARVVSLAPEVL 122          
BLAST of EY744210 vs. ExPASy Swiss-Prot
Match: RL14_THEFY (50S ribosomal protein L14 OS=Thermobifida fusca (strain YX) GN=rplN PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.596e-13
Identity = 47/116 (40.52%), Postives = 67/116 (57.76%), Query Frame = 2
Query:  110 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD-LWPRIASAANAIV 445
            ADNTGAK L  I V G  GR      A +GD ++ATVK   P    K   ++ AV+VR  K  RR DG ++ F++NA V++   G+ +G+ I GP+G+E  D  + RI S A  ++
Sbjct:   11 ADNTGAKELLTIRVLGGSGRRY----ASIGDTIVATVKDALPGAGVKKGDIVKAVVVRTTKERRRPDGFYIRFDENAAVLIKDGGDPRGTRIFGPVGRELRDKKFMRIISLAPEVL 122          
BLAST of EY744210 vs. ExPASy Swiss-Prot
Match: RK14_SCEOB (50S ribosomal protein L14, chloroplastic OS=Scenedesmus obliquus GN=rpl14 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.596e-13
Identity = 47/119 (39.50%), Postives = 73/119 (61.34%), Query Frame = 2
Query:  101 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL-WPRIASAANAIV 445
            +N ADN+GA+ L  I V G  GR     +A +GD+++A VK   P++  K   V+ AVIVR  K  RR++G+ + F+DNA V++N +G  +G+ + GPI +E  D  + +I S A  +V
Sbjct:    8 LNVADNSGARKLMCIRVLG-GGR----QTATIGDVIIAVVKDALPNMPLKKSDVVRAVIVRTSKGVRRENGMMLCFDDNAAVVINKEGNPRGTRVFGPIARELRDRNFTKIVSLAPEVV 121          
The following BLAST results are available for this feature:
BLAST of EY744210 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 379
Match NameE-valueIdentityDescription
RL14_LEIXX2.108e-1346.0850S ribosomal protein L14 OS=Leifsonia xyli subsp.... [more]
RL14_BEUC12.108e-1341.3850S ribosomal protein L14 OS=Beutenbergia cavernae... [more]
RL14_ACAM12.108e-1342.4550S ribosomal protein L14 OS=Acaryochloris marina ... [more]
RK14_STAPU2.108e-1336.9750S ribosomal protein L14, chloroplastic OS=Staura... [more]
RL14_GRAFK2.753e-1344.1250S ribosomal protein L14 OS=Gramella forsetii (st... [more]
RL14_DESVM2.753e-1343.5250S ribosomal protein L14 OS=Desulfovibrio vulgari... [more]
RK14_CHLRE2.753e-1340.9550S ribosomal protein L14, chloroplastic OS=Chlamy... [more]
RK14_ADICA2.753e-1333.6050S ribosomal protein L14, chloroplastic OS=Adiant... [more]
RL14_THEFY3.596e-1340.5250S ribosomal protein L14 OS=Thermobifida fusca (s... [more]
RK14_SCEOB3.596e-1339.5050S ribosomal protein L14, chloroplastic OS=Scened... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-B03-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744210 ID=EY744210; Name=EY744210; organism=Citrus sinensis; type=EST; length=901bp
CACGCGTCCGCCTTTAGCTGCGAAAATGTCGAAGCGAGGACGTGGAGGAT
CAGCAGGTAACAAGTTCAGGATGTCACTGGGTTTGCCAGTGGCAGCAACT
GTGAACTGTGCTGACAACACTGGGGCAAAGAACCTTTACATCATCTCAGT
TAAGGGAATCAAAGGTCGCCTCAACCGTTTGCCGTCTGCCTGTGTTGGAG
ACATGGTTATGGCTACCGTGAAGAAAGGGAAGCCTGATCTTAGGAAGAAG
GTGATGCCCGCCGTCATTGTAAGGCAGCGCAAGCCATGGCGCAGAAAGGA
TGGTGTCTTCATGTACTTTGAAGATAATGCTGGTGTTATTGTGAATCCAA
AGGGAGAAATGAAGGGTTCTGCCATCACCGGTCCAATTGGTAAAGAGTGT
GCTGATTTGTGGCCGAGAATTGCAAGTGCAGCCAATGCTATCGTTTAAGA
CATTCAAGACCGATAACCTATATCATCCTTTTTGTTGCACTAAAAAGAAA
TCTGGTGAAGTTTCATAGTAGGAAGGAGTAAAGCTTTTCTGTGAACTTTC
TGTATGATTTTGTTATTCTAGTTTTGTAAGTGGTAAGAAAGTTTGGAGTT
TTGTTGATCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
GGGCGGGCCCCTCCTAAAGAACCCAACCTTAAGTACCCCGTTGCATGCCA
ACGTCCAAACCTCTTCTAAAAGTGGCCCCCTAAATTCAATTTCCCGGGGC
CCTCCTTTTTTAAACCGTCCTGAAGGGGGAAAACCCCTGGGGGTTTCCCC
AACTTTAATCCCCCTTGGCAAACAATCCCCCCTTTTCCCCCCCCGGGGGG
GAAAAAAAGAAAAAAAGGGCCCCCCCCCGATTCCCCCCCTTCCCCCAAAA
T
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