EY744209

Overview
NameEY744209
Unique NameEY744209
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length977
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744209 vs. ExPASy Swiss-Prot
Match: TBG_PLAFO (Tubulin gamma chain OS=Plasmodium falciparum (isolate NF54) GN=G-TUB PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.643e-14
Identity = 49/190 (25.79%), Postives = 97/190 (51.05%), Query Frame = 1
Query:   13 LNSDLRKLAVNLIPFPRLHFFMVGFAPLT-SRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLS---MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGM-----DEMEFTEAESN---MNDLVSEYQ 546
            +N+D+  L  +LI  P+ HF +  + P+T  +     +  TV ++ +++   KN+M +A  R G Y++   + RG+    +V + +  ++++    F++W P +++ ++    P  +S   +    + N TSI  +F R   QF  +++R+AFL  Y  E M      +  F E ES+     +L+ EY+
Sbjct:  250 MNNDMISLISSLIINPKCHFLITSYTPITIDKHISNVQKTTVLDVMKRLLHTKNIMVSAPVRRGMYISILNIIRGETDPTQVHKGLQRIRDRKLVNFIKWNPASIQVTLAKQSPHVVSQHKVCGLMMANHTSISTLFERCVTQFDRLYKRRAFLENYKKESMFSSADGQGNFEEMESSKEITQNLIDEYK 439          
BLAST of EY744209 vs. ExPASy Swiss-Prot
Match: TBG2_ARATH (Tubulin gamma-2 chain OS=Arabidopsis thaliana GN=TUBG2 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.643e-14
Identity = 51/191 (26.70%), Postives = 98/191 (51.31%), Query Frame = 1
Query:   13 LNSDLRKLAVNLIPFPRLHFFMVGFAPLT-SRGSQQYRALTVPELTQQMWDAKNMMCAADPRH-----GRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP---RGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGM----DEMEFTEAESNMNDLVSEYQ 546
            +N+DL  L  +LIP PR HF M G+ PLT  R +   R  TV ++ +++   KN+M ++  R+      +Y++   + +G++   +V E +  ++ +    F++W P +++ ++    P       ++   + + TSI+ +F R   Q+  + +++AFL  Y    M    D  EF E+   +  LV EY+
Sbjct:  249 MNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIDWGPASIQVALSKKSPYVQTSHRVSGLMLASHTSIRHLFSRCLSQYDKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESLVDEYK 439          
BLAST of EY744209 vs. ExPASy Swiss-Prot
Match: TBG1_ARATH (Tubulin gamma-1 chain OS=Arabidopsis thaliana GN=TUBG1 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.643e-14
Identity = 51/191 (26.70%), Postives = 98/191 (51.31%), Query Frame = 1
Query:   13 LNSDLRKLAVNLIPFPRLHFFMVGFAPLT-SRGSQQYRALTVPELTQQMWDAKNMMCAADPRH-----GRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP---RGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGM----DEMEFTEAESNMNDLVSEYQ 546
            +N+DL  L  +LIP PR HF M G+ PLT  R +   R  TV ++ +++   KN+M ++  R+      +Y++   + +G++   +V E +  ++ +    F+EW P +++ ++    P       ++   + + TSI+ +F +   Q+  + +++AFL  Y    M    D  EF E+   +  LV EY+
Sbjct:  249 MNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSKKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYDKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESLVDEYK 439          
BLAST of EY744209 vs. ExPASy Swiss-Prot
Match: TBG3_MAIZE (Tubulin gamma-3 chain (Fragment) OS=Zea mays GN=TUBG3 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.146e-14
Identity = 51/191 (26.70%), Postives = 97/191 (50.79%), Query Frame = 1
Query:   13 LNSDLRKLAVNLIPFPRLHFFMVGFAPLT-SRGSQQYRALTVPELTQQMWDAKNMMCAADPR-----HGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLS---MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGM----DEMEFTEAESNMNDLVSEYQ 546
            +N+DL  L  +LIP PR HF M G+ PLT  R     R  TV ++ +++   KN+M ++  R       +Y++   + +G++   +V E +  ++ +    F++W P +++ ++    P   +   ++   + N TSI+ +F +   Q+  + +++AFL  Y    M    D  EF E+   +  LV EY+
Sbjct:  201 MNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQVNMIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIDWAPASIQVALSRKSPYVQTTHRVSGLMLANHTSIRHLFSKCLGQYEKLRKKQAFLDNYRKFPMFADNDLSEFDESREIIESLVDEYK 391          
BLAST of EY744209 vs. ExPASy Swiss-Prot
Match: TBG2_MAIZE (Tubulin gamma-2 chain OS=Zea mays GN=TUBG2 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.803e-14
Identity = 51/191 (26.70%), Postives = 97/191 (50.79%), Query Frame = 1
Query:   13 LNSDLRKLAVNLIPFPRLHFFMVGFAPLT-SRGSQQYRALTVPELTQQMWDAKNMMCAADPR-----HGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLS---MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGM----DEMEFTEAESNMNDLVSEYQ 546
            +N+DL  L  +LIP PR HF M G+ PLT  R     R  TV ++ +++   KN+M ++  R       +Y++   + +G++   +V E +  ++ +    F++W P +++ ++    P   +   ++   + N TSI+ +F +   Q+  + +++AFL  Y    M    D  EF E+   +  LV EY+
Sbjct:  249 MNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQVNMIRKTTVLDVMRRLLQTKNVMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIDWAPASIQVALSRKSPYVQTTHRVSGLMLANHTSIRHLFGKCLGQYEKLRKKQAFLDNYRKFPMFADNDLSEFDESREIIESLVDEYK 439          
BLAST of EY744209 vs. ExPASy Swiss-Prot
Match: TBG1_HUMAN (Tubulin gamma-1 chain OS=Homo sapiens GN=TUBG1 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.803e-14
Identity = 50/191 (26.18%), Postives = 94/191 (49.21%), Query Frame = 1
Query:   13 LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGS-QQYRALTVPELTQQMWDAKNMMCAAD---PRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVK---SSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 564
            +N+DL  L  +LIP PRLHF M G+ PLT+  S    R  TV ++ +++   KN+M +       +  Y+    + +G++   +V + +  ++ +  + F+ W P +++   S      P    ++   + N TSI  +F R   Q+  + +R+AFL  +  E M +  F E +++   +     +Y  AT
Sbjct:  249 MNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSRKSPYLPSAHRVSGLMMANHTSISSLFERTCRQYDKLRKREAFLEQFRKEDMFKDNFDEMDTSREIVQQLIDEYHAAT 439          
BLAST of EY744209 vs. ExPASy Swiss-Prot
Match: TBG1_RAT (Tubulin gamma-1 chain OS=Rattus norvegicus GN=Tubg1 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 6.244e-14
Identity = 49/191 (25.65%), Postives = 94/191 (49.21%), Query Frame = 1
Query:   13 LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGS-QQYRALTVPELTQQMWDAKNMMCAAD---PRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVK---SSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 564
            +N+DL  L  +LIP PRLHF M G+ PLT+  S    R  TV ++ +++   KN+M +       +  Y+    + +G++   +V + +  ++ +  + F+ W P +++   S      P    ++   + N TSI  +F R   QF  + +R+AF+  +  E + +  F E +++   +     +Y  AT
Sbjct:  249 MNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSRKSPYLPSAHRVSGLMMANHTSISSLFERTCRQFDKLRKREAFMEQFRKEDIFKDNFDEMDTSREIVQQLIDEYHAAT 439          
BLAST of EY744209 vs. ExPASy Swiss-Prot
Match: TBG1_MOUSE (Tubulin gamma-1 chain OS=Mus musculus GN=Tubg1 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 6.244e-14
Identity = 49/191 (25.65%), Postives = 94/191 (49.21%), Query Frame = 1
Query:   13 LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGS-QQYRALTVPELTQQMWDAKNMMCAAD---PRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVK---SSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 564
            +N+DL  L  +LIP PRLHF M G+ PLT+  S    R  TV ++ +++   KN+M +       +  Y+    + +G++   +V + +  ++ +  + F+ W P +++   S      P    ++   + N TSI  +F R   QF  + +R+AF+  +  E + +  F E +++   +     +Y  AT
Sbjct:  249 MNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSRKSPYLPSAHRVSGLMMANHTSISSLFERTCRQFDKLRKREAFMEQFRKEDIFKDNFDEMDTSREIVQQLIDEYHAAT 439          
BLAST of EY744209 vs. ExPASy Swiss-Prot
Match: TBG1_MAIZE (Tubulin gamma-1 chain OS=Zea mays GN=TUBG1 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 6.244e-14
Identity = 51/191 (26.70%), Postives = 96/191 (50.26%), Query Frame = 1
Query:   13 LNSDLRKLAVNLIPFPRLHFFMVGFAPLT-SRGSQQYRALTVPELTQQMWDAKNMMCAADPR-----HGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLS---MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGM----DEMEFTEAESNMNDLVSEYQ 546
            +N+DL  L  +LIP PR HF M G+ PLT  R     R  TV ++ +++   KN+M ++  R       +Y++   + +G++   +V E +  ++ +    F+ W P +++ ++    P   +   ++   + N TSI+ +F +   Q+  + +++AFL  Y    M    D  EF E+   +  LV EY+
Sbjct:  249 MNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQVNMIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIYWAPASIQVALSRKSPYVQTTHRVSGLMLANHTSIRHLFSKCLGQYEKLRKKQAFLDNYRKFPMFADNDLSEFDESREIIESLVDEYK 439          
BLAST of EY744209 vs. ExPASy Swiss-Prot
Match: TBG1_CANFA (Tubulin gamma-1 chain OS=Canis familiaris GN=TUBG1 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 6.244e-14
Identity = 49/187 (26.20%), Postives = 95/187 (50.80%), Query Frame = 1
Query:   13 LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGS-QQYRALTVPELTQQMWDAKNMMCAAD---PRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVK---SSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESN---MNDLVSEY 543
            +N+DL  L  +LIP PRLHF M G+ PLT+  S    R  TV ++ +++   KN+M +       +  Y+    + +G++   +V + +  ++ +  + F+ W P +++   S      P    ++   + N TSI  +F R   Q+  + +R+AFL  +  E + +  F E +++   ++ L+ EY
Sbjct:  249 MNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSRKSPYLPSAHRVSGLMMANHTSISSLFERTCRQYDKLRKREAFLEQFRKEDIFKENFDELDTSREVVHQLIDEY 435          
The following BLAST results are available for this feature:
BLAST of EY744209 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 413
Match NameE-valueIdentityDescription
TBG_PLAFO1.643e-1425.79Tubulin gamma chain OS=Plasmodium falciparum (isol... [more]
TBG2_ARATH1.643e-1426.70Tubulin gamma-2 chain OS=Arabidopsis thaliana GN=T... [more]
TBG1_ARATH1.643e-1426.70Tubulin gamma-1 chain OS=Arabidopsis thaliana GN=T... [more]
TBG3_MAIZE2.146e-1426.70Tubulin gamma-3 chain (Fragment) OS=Zea mays GN=TU... [more]
TBG2_MAIZE2.803e-1426.70Tubulin gamma-2 chain OS=Zea mays GN=TUBG2 PE=2 SV... [more]
TBG1_HUMAN2.803e-1426.18Tubulin gamma-1 chain OS=Homo sapiens GN=TUBG1 PE=... [more]
TBG1_RAT6.244e-1425.65Tubulin gamma-1 chain OS=Rattus norvegicus GN=Tubg... [more]
TBG1_MOUSE6.244e-1425.65Tubulin gamma-1 chain OS=Mus musculus GN=Tubg1 PE=... [more]
TBG1_MAIZE6.244e-1426.70Tubulin gamma-1 chain OS=Zea mays GN=TUBG1 PE=2 SV... [more]
TBG1_CANFA6.244e-1426.20Tubulin gamma-1 chain OS=Canis familiaris GN=TUBG1... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-B02-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744209 ID=EY744209; Name=EY744209; organism=Citrus sinensis; type=EST; length=977bp
CCCACGCGTCCGCTGAACTCTGACCTTCGAAAGCTTGCTGTTAACTTGAT
TCCTTTCCCTCGCCTGCACTTCTTCATGGTTGGGTTTGCTCCCCTTACCT
CCCGTGGTTCTCAGCAGTACCGTGCCTTGACAGTCCCAGAACTTACCCAA
CAAATGTGGGATGCCAAGAACATGATGTGTGCTGCCGACCCAAGGCACGG
TCGTTACCTCACTGCTTCTGCCATGTTCAGGGGTAAAATGAGCACCAAGG
AAGTCGACGAGCAGATGATCAATGTTCAAAACAAAAACTCTTCCTACTTT
GTGGAGTGGATTCCAAACAATGTGAAGTCCAGTGTTTGTGACATTCCTCC
CAGAGGTCTCTCCATGGCATCCACCTTCATCGGGAACTCAACATCCATCC
AAGAAATGTTCCGAAGAGTGAGTGAGCAATTCACAGCTATGTTTAGGAGA
AAGGCTTTCCTTCACTGGTACACTGGTGAAGGAATGGATGAAATGGAGTT
CACTGAAGCTGAGAGCAATATGAATGACCTTGTGTCTGAGTACCAGCAGT
ACCAGGATGCCACCGCCGATGAGGAAGGTGAGTACAAAGATGAGGAAGAG
GGAGAAATGGAGCATATTTGAGGAAATTGTGTATGATGCATATTTGTCTG
GGTAGCTGGTTTTGTCAACCTTGCTTGGGAATGGAAAAAAATGATCCTAT
GAAGGGTTAAAATTTTTTCTTTCCCCAGTTTTTTTACCTCCAGTAACCAT
TAAAATGGGGGGAATGGAGGAAGGGGATTCAAAAAAGAATCCATTATTTG
GGGGAAGGGAAAAAATTAAAGGGAAGGGAGCCTTTTTTTTTTGAAAATAA
AAAAAGGGGGGGGCGCACCCTTTAACCCTTTACAATTCTTTTTTCGGGGG
ATTTTAAAATTCAATTTTTTTTGGATTTTCTCATTTTTTCCCCCTTAGCC
CCCTTTTGTTCTTTTTTTTTTATTGTT
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