EY744209
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744209 vs. ExPASy Swiss-Prot
Match: TBG_PLAFO (Tubulin gamma chain OS=Plasmodium falciparum (isolate NF54) GN=G-TUB PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.643e-14 Identity = 49/190 (25.79%), Postives = 97/190 (51.05%), Query Frame = 1 Query: 13 LNSDLRKLAVNLIPFPRLHFFMVGFAPLT-SRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLS---MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGM-----DEMEFTEAESN---MNDLVSEYQ 546 +N+D+ L +LI P+ HF + + P+T + + TV ++ +++ KN+M +A R G Y++ + RG+ +V + + ++++ F++W P +++ ++ P +S + + N TSI +F R QF +++R+AFL Y E M + F E ES+ +L+ EY+ Sbjct: 250 MNNDMISLISSLIINPKCHFLITSYTPITIDKHISNVQKTTVLDVMKRLLHTKNIMVSAPVRRGMYISILNIIRGETDPTQVHKGLQRIRDRKLVNFIKWNPASIQVTLAKQSPHVVSQHKVCGLMMANHTSISTLFERCVTQFDRLYKRRAFLENYKKESMFSSADGQGNFEEMESSKEITQNLIDEYK 439
BLAST of EY744209 vs. ExPASy Swiss-Prot
Match: TBG2_ARATH (Tubulin gamma-2 chain OS=Arabidopsis thaliana GN=TUBG2 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.643e-14 Identity = 51/191 (26.70%), Postives = 98/191 (51.31%), Query Frame = 1 Query: 13 LNSDLRKLAVNLIPFPRLHFFMVGFAPLT-SRGSQQYRALTVPELTQQMWDAKNMMCAADPRH-----GRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP---RGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGM----DEMEFTEAESNMNDLVSEYQ 546 +N+DL L +LIP PR HF M G+ PLT R + R TV ++ +++ KN+M ++ R+ +Y++ + +G++ +V E + ++ + F++W P +++ ++ P ++ + + TSI+ +F R Q+ + +++AFL Y M D EF E+ + LV EY+ Sbjct: 249 MNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIDWGPASIQVALSKKSPYVQTSHRVSGLMLASHTSIRHLFSRCLSQYDKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESLVDEYK 439
BLAST of EY744209 vs. ExPASy Swiss-Prot
Match: TBG1_ARATH (Tubulin gamma-1 chain OS=Arabidopsis thaliana GN=TUBG1 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.643e-14 Identity = 51/191 (26.70%), Postives = 98/191 (51.31%), Query Frame = 1 Query: 13 LNSDLRKLAVNLIPFPRLHFFMVGFAPLT-SRGSQQYRALTVPELTQQMWDAKNMMCAADPRH-----GRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP---RGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGM----DEMEFTEAESNMNDLVSEYQ 546 +N+DL L +LIP PR HF M G+ PLT R + R TV ++ +++ KN+M ++ R+ +Y++ + +G++ +V E + ++ + F+EW P +++ ++ P ++ + + TSI+ +F + Q+ + +++AFL Y M D EF E+ + LV EY+ Sbjct: 249 MNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSKKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYDKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESLVDEYK 439
BLAST of EY744209 vs. ExPASy Swiss-Prot
Match: TBG3_MAIZE (Tubulin gamma-3 chain (Fragment) OS=Zea mays GN=TUBG3 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 2.146e-14 Identity = 51/191 (26.70%), Postives = 97/191 (50.79%), Query Frame = 1 Query: 13 LNSDLRKLAVNLIPFPRLHFFMVGFAPLT-SRGSQQYRALTVPELTQQMWDAKNMMCAADPR-----HGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLS---MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGM----DEMEFTEAESNMNDLVSEYQ 546 +N+DL L +LIP PR HF M G+ PLT R R TV ++ +++ KN+M ++ R +Y++ + +G++ +V E + ++ + F++W P +++ ++ P + ++ + N TSI+ +F + Q+ + +++AFL Y M D EF E+ + LV EY+ Sbjct: 201 MNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQVNMIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIDWAPASIQVALSRKSPYVQTTHRVSGLMLANHTSIRHLFSKCLGQYEKLRKKQAFLDNYRKFPMFADNDLSEFDESREIIESLVDEYK 391
BLAST of EY744209 vs. ExPASy Swiss-Prot
Match: TBG2_MAIZE (Tubulin gamma-2 chain OS=Zea mays GN=TUBG2 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.803e-14 Identity = 51/191 (26.70%), Postives = 97/191 (50.79%), Query Frame = 1 Query: 13 LNSDLRKLAVNLIPFPRLHFFMVGFAPLT-SRGSQQYRALTVPELTQQMWDAKNMMCAADPR-----HGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLS---MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGM----DEMEFTEAESNMNDLVSEYQ 546 +N+DL L +LIP PR HF M G+ PLT R R TV ++ +++ KN+M ++ R +Y++ + +G++ +V E + ++ + F++W P +++ ++ P + ++ + N TSI+ +F + Q+ + +++AFL Y M D EF E+ + LV EY+ Sbjct: 249 MNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQVNMIRKTTVLDVMRRLLQTKNVMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIDWAPASIQVALSRKSPYVQTTHRVSGLMLANHTSIRHLFGKCLGQYEKLRKKQAFLDNYRKFPMFADNDLSEFDESREIIESLVDEYK 439
BLAST of EY744209 vs. ExPASy Swiss-Prot
Match: TBG1_HUMAN (Tubulin gamma-1 chain OS=Homo sapiens GN=TUBG1 PE=1 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 2.803e-14 Identity = 50/191 (26.18%), Postives = 94/191 (49.21%), Query Frame = 1 Query: 13 LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGS-QQYRALTVPELTQQMWDAKNMMCAAD---PRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVK---SSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 564 +N+DL L +LIP PRLHF M G+ PLT+ S R TV ++ +++ KN+M + + Y+ + +G++ +V + + ++ + + F+ W P +++ S P ++ + N TSI +F R Q+ + +R+AFL + E M + F E +++ + +Y AT Sbjct: 249 MNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSRKSPYLPSAHRVSGLMMANHTSISSLFERTCRQYDKLRKREAFLEQFRKEDMFKDNFDEMDTSREIVQQLIDEYHAAT 439
BLAST of EY744209 vs. ExPASy Swiss-Prot
Match: TBG1_RAT (Tubulin gamma-1 chain OS=Rattus norvegicus GN=Tubg1 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 6.244e-14 Identity = 49/191 (25.65%), Postives = 94/191 (49.21%), Query Frame = 1 Query: 13 LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGS-QQYRALTVPELTQQMWDAKNMMCAAD---PRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVK---SSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 564 +N+DL L +LIP PRLHF M G+ PLT+ S R TV ++ +++ KN+M + + Y+ + +G++ +V + + ++ + + F+ W P +++ S P ++ + N TSI +F R QF + +R+AF+ + E + + F E +++ + +Y AT Sbjct: 249 MNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSRKSPYLPSAHRVSGLMMANHTSISSLFERTCRQFDKLRKREAFMEQFRKEDIFKDNFDEMDTSREIVQQLIDEYHAAT 439
BLAST of EY744209 vs. ExPASy Swiss-Prot
Match: TBG1_MOUSE (Tubulin gamma-1 chain OS=Mus musculus GN=Tubg1 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 6.244e-14 Identity = 49/191 (25.65%), Postives = 94/191 (49.21%), Query Frame = 1 Query: 13 LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGS-QQYRALTVPELTQQMWDAKNMMCAAD---PRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVK---SSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 564 +N+DL L +LIP PRLHF M G+ PLT+ S R TV ++ +++ KN+M + + Y+ + +G++ +V + + ++ + + F+ W P +++ S P ++ + N TSI +F R QF + +R+AF+ + E + + F E +++ + +Y AT Sbjct: 249 MNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSRKSPYLPSAHRVSGLMMANHTSISSLFERTCRQFDKLRKREAFMEQFRKEDIFKDNFDEMDTSREIVQQLIDEYHAAT 439
BLAST of EY744209 vs. ExPASy Swiss-Prot
Match: TBG1_MAIZE (Tubulin gamma-1 chain OS=Zea mays GN=TUBG1 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 6.244e-14 Identity = 51/191 (26.70%), Postives = 96/191 (50.26%), Query Frame = 1 Query: 13 LNSDLRKLAVNLIPFPRLHFFMVGFAPLT-SRGSQQYRALTVPELTQQMWDAKNMMCAADPR-----HGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLS---MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGM----DEMEFTEAESNMNDLVSEYQ 546 +N+DL L +LIP PR HF M G+ PLT R R TV ++ +++ KN+M ++ R +Y++ + +G++ +V E + ++ + F+ W P +++ ++ P + ++ + N TSI+ +F + Q+ + +++AFL Y M D EF E+ + LV EY+ Sbjct: 249 MNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQVNMIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIYWAPASIQVALSRKSPYVQTTHRVSGLMLANHTSIRHLFSKCLGQYEKLRKKQAFLDNYRKFPMFADNDLSEFDESREIIESLVDEYK 439
BLAST of EY744209 vs. ExPASy Swiss-Prot
Match: TBG1_CANFA (Tubulin gamma-1 chain OS=Canis familiaris GN=TUBG1 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 6.244e-14 Identity = 49/187 (26.20%), Postives = 95/187 (50.80%), Query Frame = 1 Query: 13 LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGS-QQYRALTVPELTQQMWDAKNMMCAAD---PRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVK---SSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESN---MNDLVSEY 543 +N+DL L +LIP PRLHF M G+ PLT+ S R TV ++ +++ KN+M + + Y+ + +G++ +V + + ++ + + F+ W P +++ S P ++ + N TSI +F R Q+ + +R+AFL + E + + F E +++ ++ L+ EY Sbjct: 249 MNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSRKSPYLPSAHRVSGLMMANHTSISSLFERTCRQYDKLRKREAFLEQFRKEDIFKENFDELDTSREVVHQLIDEY 435 The following BLAST results are available for this feature:
BLAST of EY744209 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 413
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY744209 ID=EY744209; Name=EY744209; organism=Citrus sinensis; type=EST; length=977bpback to top |