EY744209

Overview
NameEY744209
Unique NameEY744209
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length977
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY744209 vs. ExPASy Swiss-Prot
Match: TBB3_OOMCK (Tubulin beta-3 chain OS=Oomycete-like sp. (strain MacKay2000) GN=TUBB3 PE=3 SV=1)

HSP 1 Score: 345.125 bits (884), Expect = 3.577e-94
Identity = 162/185 (87.57%), Postives = 179/185 (96.76%), Query Frame = 1 
Query:   13 LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 567
            LN DLRK+AVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ +DAKNMMCAADPRHGR+LTAS MFRG+MSTKEVDEQM+NVQ KNSSYFVEWIPNN+K+SVCDIPP+GL M+STF+GNST+IQEMF+RV EQFTAM++RKAFLHWYTGEGMD+MEFTEAESNMNDLVSEYQQYQ+A+A
Sbjct:  246 LNCDLRKVAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQCFDAKNMMCAADPRHGRFLTASCMFRGRMSTKEVDEQMLNVQTKNSSYFVEWIPNNIKASVCDIPPKGLKMSSTFVGNSTAIQEMFKRVGEQFTAMYKRKAFLHWYTGEGMDDMEFTEAESNMNDLVSEYQQYQEASA 430
[Close]
BLAST of EY744209 vs. ExPASy Swiss-Prot
Match: TBB2_CHICK (Tubulin beta-2 chain OS=Gallus gallus PE=2 SV=1)

HSP 1 Score: 344.739 bits (883), Expect = 4.671e-94
Identity = 162/185 (87.57%), Postives = 179/185 (96.76%), Query Frame = 1 
Query:   13 LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 567
            LN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYRALTVPELTQQM+D+KNMM A DPRHGRYLT +A+FRG+MS KEVDEQM+NVQNKNSSYFVEWIPNNVK++VCDIPPRGL M++TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct:  246 LNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
[Close]
BLAST of EY744209 vs. ExPASy Swiss-Prot
Match: TBB2B_RAT (Tubulin beta-2B chain OS=Rattus norvegicus GN=Tubb2b PE=1 SV=1)

HSP 1 Score: 344.739 bits (883), Expect = 4.671e-94
Identity = 162/185 (87.57%), Postives = 179/185 (96.76%), Query Frame = 1 
Query:   13 LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 567
            LN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYRALTVPELTQQM+D+KNMM A DPRHGRYLT +A+FRG+MS KEVDEQM+NVQNKNSSYFVEWIPNNVK++VCDIPPRGL M++TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct:  246 LNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
[Close]
BLAST of EY744209 vs. ExPASy Swiss-Prot
Match: TBB2B_MOUSE (Tubulin beta-2B chain OS=Mus musculus GN=Tubb2b PE=1 SV=1)

HSP 1 Score: 344.739 bits (883), Expect = 4.671e-94
Identity = 162/185 (87.57%), Postives = 179/185 (96.76%), Query Frame = 1 
Query:   13 LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 567
            LN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYRALTVPELTQQM+D+KNMM A DPRHGRYLT +A+FRG+MS KEVDEQM+NVQNKNSSYFVEWIPNNVK++VCDIPPRGL M++TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct:  246 LNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
[Close]
BLAST of EY744209 vs. ExPASy Swiss-Prot
Match: TBB2B_HUMAN (Tubulin beta-2B chain OS=Homo sapiens GN=TUBB2B PE=1 SV=1)

HSP 1 Score: 344.739 bits (883), Expect = 4.671e-94
Identity = 162/185 (87.57%), Postives = 179/185 (96.76%), Query Frame = 1 
Query:   13 LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 567
            LN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYRALTVPELTQQM+D+KNMM A DPRHGRYLT +A+FRG+MS KEVDEQM+NVQNKNSSYFVEWIPNNVK++VCDIPPRGL M++TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct:  246 LNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
[Close]
BLAST of EY744209 vs. ExPASy Swiss-Prot
Match: TBB2B_BOVIN (Tubulin beta-2B chain OS=Bos taurus GN=TUBB2B PE=1 SV=2)

HSP 1 Score: 344.739 bits (883), Expect = 4.671e-94
Identity = 162/185 (87.57%), Postives = 179/185 (96.76%), Query Frame = 1 
Query:   13 LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 567
            LN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYRALTVPELTQQM+D+KNMM A DPRHGRYLT +A+FRG+MS KEVDEQM+NVQNKNSSYFVEWIPNNVK++VCDIPPRGL M++TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct:  246 LNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
[Close]
BLAST of EY744209 vs. ExPASy Swiss-Prot
Match: TBB2A_RAT (Tubulin beta-2A chain OS=Rattus norvegicus GN=Tubb2a PE=1 SV=1)

HSP 1 Score: 344.739 bits (883), Expect = 4.671e-94
Identity = 162/185 (87.57%), Postives = 179/185 (96.76%), Query Frame = 1 
Query:   13 LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 567
            LN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYRALTVPELTQQM+D+KNMM A DPRHGRYLT +A+FRG+MS KEVDEQM+NVQNKNSSYFVEWIPNNVK++VCDIPPRGL M++TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct:  246 LNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
[Close]
BLAST of EY744209 vs. ExPASy Swiss-Prot
Match: TBB2A_MOUSE (Tubulin beta-2A chain OS=Mus musculus GN=Tubb2a PE=1 SV=1)

HSP 1 Score: 344.739 bits (883), Expect = 4.671e-94
Identity = 162/185 (87.57%), Postives = 179/185 (96.76%), Query Frame = 1 
Query:   13 LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 567
            LN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYRALTVPELTQQM+D+KNMM A DPRHGRYLT +A+FRG+MS KEVDEQM+NVQNKNSSYFVEWIPNNVK++VCDIPPRGL M++TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct:  246 LNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
[Close]
BLAST of EY744209 vs. ExPASy Swiss-Prot
Match: TBB2A_MACFA (Tubulin beta-2A chain OS=Macaca fascicularis GN=TUBB2A PE=2 SV=1)

HSP 1 Score: 344.739 bits (883), Expect = 4.671e-94
Identity = 162/185 (87.57%), Postives = 179/185 (96.76%), Query Frame = 1 
Query:   13 LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 567
            LN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYRALTVPELTQQM+D+KNMM A DPRHGRYLT +A+FRG+MS KEVDEQM+NVQNKNSSYFVEWIPNNVK++VCDIPPRGL M++TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct:  246 LNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
[Close]
BLAST of EY744209 vs. ExPASy Swiss-Prot
Match: TBB2A_HUMAN (Tubulin beta-2A chain OS=Homo sapiens GN=TUBB2A PE=1 SV=1)

HSP 1 Score: 344.739 bits (883), Expect = 4.671e-94
Identity = 162/185 (87.57%), Postives = 179/185 (96.76%), Query Frame = 1 
Query:   13 LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 567
            LN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYRALTVPELTQQM+D+KNMM A DPRHGRYLT +A+FRG+MS KEVDEQM+NVQNKNSSYFVEWIPNNVK++VCDIPPRGL M++TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct:  246 LNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
The following BLAST results are available for this feature:
BLAST of EY744209 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 413
Match NameE-valueIdentityDescription
TBB3_OOMCK3.577e-9487.57Tubulin beta-3 chain OS=Oomycete-like sp. (strain ... [more]
TBB2_CHICK4.671e-9487.57Tubulin beta-2 chain OS=Gallus gallus PE=2 SV=1[more]
TBB2B_RAT4.671e-9487.57Tubulin beta-2B chain OS=Rattus norvegicus GN=Tubb... [more]
TBB2B_MOUSE4.671e-9487.57Tubulin beta-2B chain OS=Mus musculus GN=Tubb2b PE... [more]
TBB2B_HUMAN4.671e-9487.57Tubulin beta-2B chain OS=Homo sapiens GN=TUBB2B PE... [more]
TBB2B_BOVIN4.671e-9487.57Tubulin beta-2B chain OS=Bos taurus GN=TUBB2B PE=1... [more]
TBB2A_RAT4.671e-9487.57Tubulin beta-2A chain OS=Rattus norvegicus GN=Tubb... [more]
TBB2A_MOUSE4.671e-9487.57Tubulin beta-2A chain OS=Mus musculus GN=Tubb2a PE... [more]
TBB2A_MACFA4.671e-9487.57Tubulin beta-2A chain OS=Macaca fascicularis GN=TU... [more]
TBB2A_HUMAN4.671e-9487.57Tubulin beta-2A chain OS=Homo sapiens GN=TUBB2A PE... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-B02-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744209 ID=EY744209; Name=EY744209; organism=Citrus sinensis; type=EST; length=977bp
CCCACGCGTCCGCTGAACTCTGACCTTCGAAAGCTTGCTGTTAACTTGAT
TCCTTTCCCTCGCCTGCACTTCTTCATGGTTGGGTTTGCTCCCCTTACCT
CCCGTGGTTCTCAGCAGTACCGTGCCTTGACAGTCCCAGAACTTACCCAA
CAAATGTGGGATGCCAAGAACATGATGTGTGCTGCCGACCCAAGGCACGG
TCGTTACCTCACTGCTTCTGCCATGTTCAGGGGTAAAATGAGCACCAAGG
AAGTCGACGAGCAGATGATCAATGTTCAAAACAAAAACTCTTCCTACTTT
GTGGAGTGGATTCCAAACAATGTGAAGTCCAGTGTTTGTGACATTCCTCC
CAGAGGTCTCTCCATGGCATCCACCTTCATCGGGAACTCAACATCCATCC
AAGAAATGTTCCGAAGAGTGAGTGAGCAATTCACAGCTATGTTTAGGAGA
AAGGCTTTCCTTCACTGGTACACTGGTGAAGGAATGGATGAAATGGAGTT
CACTGAAGCTGAGAGCAATATGAATGACCTTGTGTCTGAGTACCAGCAGT
ACCAGGATGCCACCGCCGATGAGGAAGGTGAGTACAAAGATGAGGAAGAG
GGAGAAATGGAGCATATTTGAGGAAATTGTGTATGATGCATATTTGTCTG
GGTAGCTGGTTTTGTCAACCTTGCTTGGGAATGGAAAAAAATGATCCTAT
GAAGGGTTAAAATTTTTTCTTTCCCCAGTTTTTTTACCTCCAGTAACCAT
TAAAATGGGGGGAATGGAGGAAGGGGATTCAAAAAAGAATCCATTATTTG
GGGGAAGGGAAAAAATTAAAGGGAAGGGAGCCTTTTTTTTTTGAAAATAA
AAAAAGGGGGGGGCGCACCCTTTAACCCTTTACAATTCTTTTTTCGGGGG
ATTTTAAAATTCAATTTTTTTTGGATTTTCTCATTTTTTCCCCCTTAGCC
CCCTTTTGTTCTTTTTTTTTTATTGTT
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