EY744208

Overview
NameEY744208
Unique NameEY744208
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744208 vs. ExPASy Swiss-Prot
Match: DCEA_ECO57 (Glutamate decarboxylase alpha OS=Escherichia coli O157:H7 GN=gadA PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.621e-39
Identity = 83/200 (41.50%), Postives = 120/200 (60.00%), Query Frame = 3
Query:  111 ESIHSTFASRYIRNSLPRFTMPENSIPKEAAYQIMNDELMLDGNPRLNLASFVTTWMEPEGDKLMMAAINENYVDMDEYPVTTKLRNRCVNIMPRVVNAPLEDSETAVRVGTVGSSEAIMLAGLAFKGKWPNKRKAEGKPFDKPSIVTGANVQVCWEKFARYFEGELKEVKLSEGYYVEDPAKAGQVGDEKTIWVAAILG 710
            E + S F ++ I         P + +  + A+QI+NDEL LDGN R NLA+F  TW +    KLM  +IN+N++D +EYP +  +  RCVN++  + +AP   +  AV   T+GSSEA ML G+A K +W  + +A GKP DKP++V G  VQ+CW KFARY++ EL+E+ +  G    DP +  +  DE TI V    G
Sbjct:   12 ELLDSRFGAKAISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFG 210          
BLAST of EY744208 vs. ExPASy Swiss-Prot
Match: DCEB_ECOL6 (Glutamate decarboxylase beta OS=Escherichia coli O6 GN=gadB PE=2 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 2.896e-38
Identity = 82/200 (41.00%), Postives = 120/200 (60.00%), Query Frame = 3
Query:  111 ESIHSTFASRYIRNSLPRFTMPENSIPKEAAYQIMNDELMLDGNPRLNLASFVTTWMEPEGDKLMMAAINENYVDMDEYPVTTKLRNRCVNIMPRVVNAPLEDSETAVRVGTVGSSEAIMLAGLAFKGKWPNKRKAEGKPFDKPSIVTGANVQVCWEKFARYFEGELKEVKLSEGYYVEDPAKAGQVGDEKTIWVAAILG 710
            E + S F ++ I         P + +  + A+QI+NDEL LDGN R NLA+F  TW +    KLM  +IN+N++D +EYP +  +  RCVN++  + +AP   +  AV   T+GSSEA ML G+A K +W  + +A GKP +KP++V G  VQ+CW KFARY++ EL+E+ +  G    DP +  +  DE TI V    G
Sbjct:   12 ELLDSRFGAKSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDDNVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTNKPNLVCGP-VQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFG 210          
BLAST of EY744208 vs. ExPASy Swiss-Prot
Match: GADA_DICDI (Glutamate decarboxylase A OS=Dictyostelium discoideum GN=gadA PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.782e-38
Identity = 86/200 (43.00%), Postives = 124/200 (62.00%), Query Frame = 3
Query:  111 ESIHSTFASRYIRNSLPRFTMPENSIPKEAAYQIMNDELMLDGNPRLNLASFVTTWMEPEGDKLMMAAINENYVDMDEYPVTTKLRNRCVNIMPRVVNAPLEDSETAVRVGTVGSSEAIMLAGLAFKGKWPNKRKAEGKPFDKPSIVTGANVQVCWEKFARYFEGELKEVKLSEGYYVEDPAKAGQVGDEKTIWVAAILG 710
            +  + ++AS      + ++++ E S   E    ++ DEL+LDGN + NLA+F  T ++ E   LM   I++N +D DEYP T ++ +RCV+I+  + N+P E SET +   T GSSEA ML G+A K +W   RK +GKPFDKP+IVTG  VQ+CW KFA YF+ EL+EV +    Y+  P +A +  DE TI V   LG
Sbjct:   12 KGFYDSYASPPATKEISKYSLKEESNKPEVIRDLIIDELLLDGNAKQNLATFCQTDLDKEIHVLMDKCIDKNMIDKDEYPQTAEIESRCVHILADLWNSP-ESSET-IGCSTTGSSEAAMLGGMALKWRWRENRKKQGKPFDKPNIVTGP-VQICWHKFALYFDIELREVPMEHDRYIMTPEEAIKRCDENTIGVIPTLG 208          
BLAST of EY744208 vs. ExPASy Swiss-Prot
Match: GADB_DICDI (Glutamate decarboxylase B OS=Dictyostelium discoideum GN=gadB PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.112e-35
Identity = 77/203 (37.93%), Postives = 118/203 (58.13%), Query Frame = 3
Query:  102 ESDESIHSTFASRYIRNSLPRFTMPENSIPKEAAYQIMNDELMLDGNPRLNLASFVTTWMEPEGDKLMMAAINENYVDMDEYPVTTKLRNRCVNIMPRVVNAPLEDSETAVRVGTVGSSEAIMLAGLAFKGKWPNKRKAEGKPFDKPSIVTGANVQVCWEKFARYFEGELKEVKLSEGYYVEDPAKAGQVGDEKTIWVAAILG 710
            +  +S++  +        + +F + ++    E   +++ DEL+LDGN + NLA+F  T ++     +M   I++N +D DEYP + ++ NRC++I+  + NAP  DS   +   T GSSEA ML GLA K  W   RK  G P+DKP+IVTG  VQ+CW KFA YF+ E++E+ +  G YV +  +  +  DE TI V   LG
Sbjct:    7 DKHKSLYDNYVQSATTEEIAKFKLADDPNEPETIKKLIMDELLLDGNSKQNLATFCQTDLDKNIHSIMDKCIDKNMIDKDEYPQSAEIENRCLHILADLWNAP--DSSDTIGCSTTGSSEAAMLGGLALKWNWRENRKKLGLPYDKPNIVTGP-VQICWHKFALYFDIEIREIPMENGRYVMNSEEVLKRVDENTIGVIPTLG 206          
BLAST of EY744208 vs. ExPASy Swiss-Prot
Match: DCE_LACLM (Glutamate decarboxylase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=gadB PE=1 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 6.677e-35
Identity = 82/215 (38.14%), Postives = 123/215 (57.21%), Query Frame = 3
Query:   78 MVLSKTFSESDESIHSTFASRYIRNSLPRFTMPENSIPKEAAYQIMNDELMLDGNPRLNLASFVTTWMEPEGDKLMMAAINENYVDMDEYPVTTKLRNRCVNIMPRVVNAPLEDSETAVRVGTVGSSEAIMLAGLAFKGKWPNKRKAEGKPFD----KPSIVTGANVQVCWEKFARYFEGELKEVKLSEGYYVEDPAKAGQVGDEKTIWVAAILG 710
            M+  K   +  E +   F S   +  LP++ + + SI    AYQ++ DE++ +GN RLNLA+F  T+MEPE  KLM   + +N +D  EYP TT++ NRCVN++  + NA   + E  +   T+GSSEA ML G+A K  W  +++AE    D    KP++V  +  QVCWEKF  Y++ E++EV +   +   +  K     DE TI V  I+G
Sbjct:    1 MLYGKENRDEAEFLEPIFGSESEQVDLPKYKLAQQSIEPRVAYQLVQDEMLDEGNARLNLATFCQTYMEPEAVKLMSQTLEKNAIDKSEYPRTTEIENRCVNMIADLWNA--SEKEKFMGTSTIGSSEACMLGGMAMKFSW--RKRAEKLGLDINAKKPNLVISSGYQVCWEKFCVYWDIEMREVPMDREHMSINLEKVMDYVDEYTIGVVGIMG 211          
BLAST of EY744208 vs. ExPASy Swiss-Prot
Match: DCE_LACLA (Glutamate decarboxylase OS=Lactococcus lactis subsp. lactis GN=gadB PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 6.677e-35
Identity = 82/215 (38.14%), Postives = 124/215 (57.67%), Query Frame = 3
Query:   78 MVLSKTFSESDESIHSTFASRYIRNSLPRFTMPENSIPKEAAYQIMNDELMLDGNPRLNLASFVTTWMEPEGDKLMMAAINENYVDMDEYPVTTKLRNRCVNIMPRVVNAPLEDSETAVRVGTVGSSEAIMLAGLAFKGKWPNKRKAEGKPFD----KPSIVTGANVQVCWEKFARYFEGELKEVKLSEGYYVEDPAKAGQVGDEKTIWVAAILG 710
            M+  K   +  E +   F S   +  LP++ + + SI    AYQ++ DE++ +GN RLNLA+F  T+MEPE  KLM   + +N +D  EYP TT++ NRCVN++  + NA   + E  +   T+GSSEA ML G+A K  W  +++AE    D    KP++V  +  QVCWEKF  Y++ E++EV + + +   +  K     DE TI V  I+G
Sbjct:    1 MLYGKENRDEAEFLEPIFGSESEQVDLPKYKLAQQSIEPRVAYQLVQDEMLDEGNARLNLATFCQTYMEPEAVKLMSQTLEKNAIDKSEYPRTTEIENRCVNMIADLWNA--SEKEKFMGTSTIGSSEACMLGGMAMKFSW--RKRAEKLGLDINAKKPNLVISSGYQVCWEKFCIYWDIEMREVPMDKEHMSINLDKVMDYVDEYTIGVVGIMG 211          
BLAST of EY744208 vs. ExPASy Swiss-Prot
Match: DCEC_LISIN (Probable glutamate decarboxylase gamma OS=Listeria innocua GN=lin2528 PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.487e-34
Identity = 80/212 (37.74%), Postives = 122/212 (57.55%), Query Frame = 3
Query:   96 FSESDESIHST-----FASRYIRNSLPRFTMPENSIPKEAAYQIMNDELMLDGNPRLNLASFVTTWMEPEGDKLMMAAINENYVDMDEYPVTTKLRNRCVNIMPRVVNAPLEDSETAVRVGTVGSSEAIMLAGLAFKGKWPNKRKAEGKPFD--KPSIVTGANVQVCWEKFARYFEGELKEVKLSEGYYVEDPAKAGQVGDEKTIWVAAILG 710
            +SE+D+  H +     F S     S+P++ + +  +    AYQ++ D+LM +GN R NLA+F  T+ME E + LM   + +N +D  EYP T +L NRCVNI+  + NAP E S   +   TVGSSEA ML GLA K +W N  +  G      +P+++  +  QVCWEKF  Y++ +++ V + + +   D  K  ++ DE TI +  ILG
Sbjct:    3 YSENDKRKHESYRIPLFGSEEESTSIPKYVLKKEPMEPRIAYQLVKDQLMDEGNARQNLATFCQTYMEKEAEILMAETLEKNAIDKSEYPQTAELENRCVNILADLWNAPKEMS--YLGTSTVGSSEACMLGGLAMKFRWRNNAEKRGLDIQAKRPNLIISSGYQVCWEKFCVYWDVDMRVVPMDKEHLSLDVEKVFELVDEYTIGIVGILG 212          
BLAST of EY744208 vs. ExPASy Swiss-Prot
Match: DCEC_LISMO (Probable glutamate decarboxylase gamma OS=Listeria monocytogenes GN=lmo2434 PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.664e-33
Identity = 76/196 (38.78%), Postives = 113/196 (57.65%), Query Frame = 3
Query:  129 FASRYIRNSLPRFTMPENSIPKEAAYQIMNDELMLDGNPRLNLASFVTTWMEPEGDKLMMAAINENYVDMDEYPVTTKLRNRCVNIMPRVVNAPLEDSETAVRVGTVGSSEAIMLAGLAFKGKWPNKRKAEGKPFD--KPSIVTGANVQVCWEKFARYFEGELKEVKLSEGYYVEDPAKAGQVGDEKTIWVAAILG 710
            F S     S+P++ + +  +    AYQ++ D+LM +GN R NLA+F  T+ME E + LM   + +N +D  EYP T +L NRCVNI+  + NAP + S   +   TVGSSEA ML GLA K +W N  +  G      +P+++  +  QVCWEKF  Y++ +++ V + + +   D  K   + DE TI V  ILG
Sbjct:   19 FGSEEESTSIPKYVLKKEPMEPRIAYQLVKDQLMDEGNARQNLATFCQTYMEKEAEILMAETLEKNAIDKSEYPQTAELENRCVNILADLWNAPKDMS--YLGTSTVGSSEACMLGGLAMKFRWRNNAEKRGLDIQAKRPNLIISSGYQVCWEKFCVYWDVDMRVVPMDKNHLSLDVDKVFDLVDEYTIGVVGILG 212          
BLAST of EY744208 vs. ExPASy Swiss-Prot
Match: DCE_YEAST (Glutamate decarboxylase OS=Saccharomyces cerevisiae GN=GAD1 PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.290e-32
Identity = 73/186 (39.25%), Postives = 112/186 (60.22%), Query Frame = 3
Query:  162 RFTMPENSIPKEAAYQIMNDELMLDGNPRLNLASFVTTWMEPEGDKLMMAAINENYVDMDEYPVTTKLRNRCVNIMPRVVNAPLEDSETAVRVGTVGSSEAIMLAGLAFKGKWPNKRKAEGKPFDKPSIVTGANVQVCWEKFARYFEGELKEVKLS-EGYYVEDPAKAGQVGDEKTIWVAAILGSS 716
            ++++P+  +P + +YQ++++EL LDGNP LNLASFV T+   +  KL+   + +N  D DEYP   +L  RC++++ ++ +A     E  +   T GSSEAIML GLA K +W ++ K  GK   KP+I+  +  QV  EKF RYFE E + V +S   +++ DP       DE TI    ILG++
Sbjct:   59 KYSVPKKGLPADLSYQLIHNELTLDGNPHLNLASFVNTFTTDQARKLIDENLTKNLADNDEYPQLIELTQRCISMLAQLWHA--NPDEEPIGCATTGSSEAIMLGGLAMKKRWEHRMKNAGKDASKPNIIMSSACQVALEKFTRYFEVECRLVPVSHRSHHMLDPESLWDYVDENTIGCFVILGTT 242          
BLAST of EY744208 vs. ExPASy Swiss-Prot
Match: DCEA_LISMO (Glutamate decarboxylase alpha OS=Listeria monocytogenes GN=gadA PE=3 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 5.849e-31
Identity = 76/196 (38.78%), Postives = 112/196 (57.14%), Query Frame = 3
Query:  129 FASRYIRNSLPRFTMPENSIPKEAAYQIMNDELMLDGNPRLNLASFVTTWMEPEGDKLMMAAINENYVDMDEYPVTTKLRNRCVNIMPRVVNAPLEDSETAVRVGTVGSSEAIMLAGLAFKGKWPNKRKAEGKPF--DKPSIVTGANVQVCWEKFARYFEGELKEVKLSEGYYVEDPAKAGQVGDEKTIWVAAILG 710
            F S      LP   M + S+    AYQ++ D+L+ +G+ R NLA+F  T+MEPE +++M   + +N +D  EYP T KL + CVN++  + N  +++SE  +   TVGSSEA ML G+A K +W +     G      KPS+V  +  QVCWEKF  Y++ EL+EV +SE +   +        DE TI +  ILG
Sbjct:   14 FGSFESGQDLPEKRMNKESVDPRIAYQLVKDQLIDEGSARQNLATFCQTYMEPEAEQIMAETMEKNAIDKSEYPQTAKLESSCVNMLADLWN--VDESEHYMGTSTVGSSEACMLGGMAMKFRWRSAALKNGLDIHAKKPSLVISSGYQVCWEKFCVYWDIELREVPMSEEHLSINTDIIMDYVDEYTIGIVGILG 207          
The following BLAST results are available for this feature:
BLAST of EY744208 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
DCEA_ECO577.621e-3941.50Glutamate decarboxylase alpha OS=Escherichia coli ... [more]
DCEB_ECOL62.896e-3841.00Glutamate decarboxylase beta OS=Escherichia coli O... [more]
GADA_DICDI3.782e-3843.00Glutamate decarboxylase A OS=Dictyostelium discoid... [more]
GADB_DICDI5.112e-3537.93Glutamate decarboxylase B OS=Dictyostelium discoid... [more]
DCE_LACLM6.677e-3538.14Glutamate decarboxylase OS=Lactococcus lactis subs... [more]
DCE_LACLA6.677e-3538.14Glutamate decarboxylase OS=Lactococcus lactis subs... [more]
DCEC_LISIN1.487e-3437.74Probable glutamate decarboxylase gamma OS=Listeria... [more]
DCEC_LISMO3.664e-3338.78Probable glutamate decarboxylase gamma OS=Listeria... [more]
DCE_YEAST5.290e-3239.25Glutamate decarboxylase OS=Saccharomyces cerevisia... [more]
DCEA_LISMO5.849e-3138.78Glutamate decarboxylase alpha OS=Listeria monocyto... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-B01-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744208 ID=EY744208; Name=EY744208; organism=Citrus sinensis; type=EST; length=847bp
TAGCTCTCTGTACTCTCTCTGACACCAAAAGAAAAAAAAAATCATTATTA
AATTTTGTTTGTTTTAATCTTTCAATCATGGTTCTTTCGAAGACATTTTC
CGAATCCGATGAGTCAATTCACTCCACCTTTGCCTCTCGCTACATCCGAA
ACTCTCTTCCTCGGTTCACGATGCCGGAGAACTCGATACCGAAGGAGGCG
GCGTACCAGATCATGAACGACGAGCTGATGCTCGACGGGAATCCAAGATT
GAACTTGGCTTCCTTCGTCACAACGTGGATGGAGCCTGAGGGTGACAAGC
TTATGATGGCTGCCATTAACGAGAACTACGTTGACATGGATGAGTATCCT
GTCACCACCAAGCTTCGCAATCGATGTGTGAACATTATGCCCCGAGTGGT
GAATGCTCCACTGGAGGACTCCGAGACGGCTGTCAGAGTTGGAACCGTAG
GATCATCGGAAGCCATAATGTTGGCCGGCCTTGCATTCAAAGGAAAGTGG
CCGAACAAGCGCAAGGCTGAAGGAAAGCCCTTTGACAAACCCAGCATTGT
CACTGGAGCGAACGTTCAGGTCTGCTGGGAGAAATTTGCGAGGTATTTTG
AGGGGGAGTTGAAGGAAGTGAAGCTGTCGGAAGGCTACTACGTGGAGGAC
CCCGCCAAAGCTGGACAAGTGGGGGATGAAAAAACAATCTGGGTAGCGGC
AATTCTGGGTTCTTCCCTCAAGGGGAAATTGAAAAAGGTCAAGCCCTTTA
AAAAACTTTTTGACAAAAAAAAAAAGGGAAAGGGGGGGGGAAAGCTCCAT
TTTTTTTTTGAGGTTTGTGGGGGGGGGGGTCATTGGACCATTTTTTT
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