EY744206

Overview
NameEY744206
Unique NameEY744206
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length824
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744206 vs. ExPASy Swiss-Prot
Match: LEU3_STRAW (3-isopropylmalate dehydrogenase OS=Streptomyces avermitilis GN=leuB PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.822e-14
Identity = 82/267 (30.71%), Postives = 119/267 (44.57%), Query Frame = 3
Query:   12 IGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETG-LLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEV--YAAYEVDRIARVAFETARKR-HGKLCSVDKANVL-EASMFWRKRITAIALKYPDVKLSHMYGDHAAMQLIPIPNSW-INCEKKHIGGLLSEEGSRITGK*GKPPPARLGEIGP 794
            IG EV+A    VL  A   + ++   +E   G       G  L +  L A KQ DA+LLGAIG    D +      E G LL++R       NLRP+ +LP +      + E    +D +VVRE T G Y G     G    G      TEV    A+ ++R+ R A+  A+ R   KL  V K NVL  A   W      +  ++PDV   +M+ D A + L+  P  + +       G ++++  + I+G  G    A  G I P
Sbjct:   15 IGQEVVAQGLKVLSAALPSD-VKLETKEFDFGARRYHATGETLTDADLDALKQHDAILLGAIG----DPSVPSGVLERGFLLKLRFAFDHHVNLRPSKLLPGVETPLAGQPE----IDFVVVREGTEGPYTGNG---GTIRTGTPHAVATEVSLNTAFGIERVVRDAYARAQARPRKKLALVHKNNVLVHAGHLWTDIFNKVGEEFPDVTTEYMHVDAATIYLVTQPERFDVIVTDNLFGDIITDLAAAISGGIG---VAASGNINP 266          
BLAST of EY744206 vs. ExPASy Swiss-Prot
Match: LEU3_CORA7 (3-isopropylmalate dehydrogenase OS=Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1) GN=leuB PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.829e-13
Identity = 73/254 (28.74%), Postives = 116/254 (45.67%), Query Frame = 3
Query:   12 IGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKP---ETGLL-QIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVY--AAYEVDRIARVAFETARKRHGKLCSVDKANVL-EASMFWRKRITAIALKYPDVKLSHMYGDHAAMQLIPIPNSW-INCEKKHIGGLLSEEGSRITG 749
            IGPEV A A  VL+        +    +  +G       G  L +   A+ ++ DA+LLGAIG          + P   E GLL ++R  L    NLRP+ + P    +ST        +D +VVRE T G+Y G     G    G E    +EV     + V+R+ R AF+ A  R   +  V K NVL  A   W++ +  +A ++P+V + + + D A + ++  P  + +       G +L++    +TG
Sbjct:   11 IGPEVTAEALKVLRAVRQ----DVEVTDYDLGARRYLRNGELLSDADFASLREHDAILLGAIGA------PGEVPPGVLERGLLLKMRFALDHHVNLRPSKLYP----TSTSPLANPGDIDFVVVREGTEGLYCGNG---GTLREGTEHEVASEVSQNTRFGVERVVRDAFQRAMGRRKHVTLVHKTNVLVNAGGLWQRTVNEVAQEFPEVTVDYNHIDAATIYMVTDPARYDVIVTDNLFGDILTDLAGAVTG 247          
BLAST of EY744206 vs. ExPASy Swiss-Prot
Match: TTUC5_AGRVI (Probable tartrate dehydrogenase/decarboxylase ttuC' OS=Agrobacterium vitis GN=ttuC' PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.075e-13
Identity = 72/263 (27.38%), Postives = 114/263 (43.35%), Query Frame = 3
Query:   12 IGPEVIAVAKNVLKLAGSLEG-IEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEH---GEEIGFNTEVYAAYEVDRIARVAFETARKRHGKLCS-VDKANVLEASM-FWRKRITAIALKYPDVKLSHMYGDHAAMQLIPIPNSWINCEKKHI-GGLLSEEGSRITGK*GKPPPARL 779
            IGPEVIA    VL+      G  +   +    G       GV +P + L   K+ DA+  GA+G         H+      L I +G   +AN+RP  +LP +  +  L+      +D ++VRE + G Y     G+G   H    EE+G    ++    V RI R AF+ A+ R  KL + V K+N     M  W +    +A ++PDV    M  D   +++   P +       ++   +LS+    + G  G  P A +
Sbjct:   14 IGPEVIAAGLQVLEALEQRSGDFKIHTETFDWGSDYYKKHGVMMPADGLDKLKKFDAIFFGAVGA---PDVPDHITLWGLRLPICQGFDQYANVRPTKILPGI--TPPLRNCGPGDLDWVIVRENSEGEY----SGHGGRAHRGLPEEVGTEVAIFTRVGVTRIMRYAFKLAQARPRKLLTVVTKSNAQRHGMVMWDEIAAEVATEFPDVTWDKMLVDAMTVRMTLKPETLDTIVATNLHADILSDLAGALAGSLGVAPTANI 267          
BLAST of EY744206 vs. ExPASy Swiss-Prot
Match: TTUC4_AGRVI (Probable tartrate dehydrogenase/decarboxylase ttuC' OS=Agrobacterium vitis GN=ttuC' PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.075e-13
Identity = 74/264 (28.03%), Postives = 116/264 (43.94%), Query Frame = 3
Query:   12 IGPEVIAVAKNVLKLAGSLEGIEFAF--QEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEH---GEEIGFNTEVYAAYEVDRIARVAFETARKRHGKLCS-VDKANVLEASM-FWRKRITAIALKYPDVKLSHMYGDHAAMQLIPIPNSWINCEKKHI-GGLLSEEGSRITGK*GKPPPARL 779
            IGPEVIA    VL+      G +F+   +    G       GV +P + L   K+ DA+  GA+G         H+      L I +G   +AN+RP  VLP +  +  L+      +D ++VRE + G Y     G+G   H    EE+G    ++    V RI R AF+ A+ R  KL + V K+N     M  W +    ++ ++PDV    M  D   +++   P S       ++   +LS+    + G  G  P A +
Sbjct:   14 IGPEVIAAGLQVLEALEKRSG-DFSIHTETFDWGSDYYKKNGVMMPADGLEQLKKFDAIFFGAVGA---PDVPDHITLWGLRLPICQGFDQYANVRPTKVLPGI--TPPLRNCGPGDLDWVIVRENSEGEY----SGHGGRAHKGLPEEVGTEVAIFTRVGVTRIMRYAFKLAQARPRKLLTVVTKSNAQRHGMVMWDEIAAEVSKEFPDVTWDKMLVDAMTVRMTLKPQSLDTIVATNLHADILSDLAGALAGSLGVAPTANI 267          
BLAST of EY744206 vs. ExPASy Swiss-Prot
Match: TTUC3_AGRVI (Probable tartrate dehydrogenase/decarboxylase ttuC' OS=Agrobacterium vitis GN=ttuC' PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.075e-13
Identity = 72/263 (27.38%), Postives = 114/263 (43.35%), Query Frame = 3
Query:   12 IGPEVIAVAKNVLKLAGSLEG-IEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEH---GEEIGFNTEVYAAYEVDRIARVAFETARKRHGKLCS-VDKANVLEASM-FWRKRITAIALKYPDVKLSHMYGDHAAMQLIPIPNSWINCEKKHI-GGLLSEEGSRITGK*GKPPPARL 779
            IGPEVIA    VL+      G  +   +    G       GV +P + L   K+ DA+  GA+G         H+      L I +G   +AN+RP  +LP +  +  L+      +D ++VRE + G Y     G+G   H    EE+G    ++    V RI R AF+ A+ R  KL + V K+N     M  W +    +A ++PDV    M  D   +++   P +       ++   +LS+    + G  G  P A +
Sbjct:   14 IGPEVIAAGLQVLEALEQRSGDFKIHTETFDWGSDYYKKHGVMMPADGLDKLKKFDAIFFGAVGA---PDVPDHITLWGLRLPICQGFDQYANVRPTKILPGI--TPPLRNCGPGDLDWVIVRENSEGEY----SGHGGRAHRGLPEEVGTEVAIFTRVGVTRIMRYAFKLAQARPRKLLTVVTKSNAQRHGMVMWDEIAAEVATEFPDVTWDKMLVDAMTVRMTLKPETLDTIVATNLHADILSDLAGALAGSLGVAPTANI 267          
BLAST of EY744206 vs. ExPASy Swiss-Prot
Match: TTUC2_AGRVI (Probable tartrate dehydrogenase/decarboxylase ttuC OS=Agrobacterium vitis GN=ttuC PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.075e-13
Identity = 74/264 (28.03%), Postives = 116/264 (43.94%), Query Frame = 3
Query:   12 IGPEVIAVAKNVLKLAGSLEGIEFAF--QEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEH---GEEIGFNTEVYAAYEVDRIARVAFETARKRHGKLCS-VDKANVLEASM-FWRKRITAIALKYPDVKLSHMYGDHAAMQLIPIPNSWINCEKKHI-GGLLSEEGSRITGK*GKPPPARL 779
            IGPEVIA    VL+      G +F+   +    G       GV +P + L   K+ DA+  GA+G         H+      L I +G   +AN+RP  VLP +  +  L+      +D ++VRE + G Y     G+G   H    EE+G    ++    V RI R AF+ A+ R  KL + V K+N     M  W +    ++ ++PDV    M  D   +++   P S       ++   +LS+    + G  G  P A +
Sbjct:   14 IGPEVIAAGLQVLEALEKRSG-DFSIHTETFDWGSDYYKKNGVMMPADGLEQLKKFDAIFFGAVGA---PDVPDHITLWGLRLPICQGFDQYANVRPTKVLPGI--TPPLRNCGPGDLDWVIVRENSEGEY----SGHGGRAHKGLPEEVGTEVAIFTRVGVTRIMRYAFKLAQARPRKLLTVVTKSNAQRHGMVMWDEIAAEVSKEFPDVTWDKMLVDAMTVRMTLKPQSLDTIVATNLHADILSDLAGALAGSLGVAPTANI 267          
BLAST of EY744206 vs. ExPASy Swiss-Prot
Match: TTUC1_AGRVI (Probable tartrate dehydrogenase/decarboxylase ttuC OS=Agrobacterium vitis GN=ttuC PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.075e-13
Identity = 72/263 (27.38%), Postives = 114/263 (43.35%), Query Frame = 3
Query:   12 IGPEVIAVAKNVLKLAGSLEG-IEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEH---GEEIGFNTEVYAAYEVDRIARVAFETARKRHGKLCS-VDKANVLEASM-FWRKRITAIALKYPDVKLSHMYGDHAAMQLIPIPNSWINCEKKHI-GGLLSEEGSRITGK*GKPPPARL 779
            IGPEVIA    VL+      G  +   +    G       GV +P + L   K+ DA+  GA+G         H+      L I +G   +AN+RP  +LP +  +  L+      +D ++VRE + G Y     G+G   H    EE+G    ++    V RI R AF+ A+ R  KL + V K+N     M  W +    +A ++PDV    M  D   +++   P +       ++   +LS+    + G  G  P A +
Sbjct:   14 IGPEVIAAGLQVLEALEQRSGDFKIHTETFDWGSDYYKKHGVMMPADGLDKLKKFDAIFFGAVGA---PDVPDHITLWGLRLPICQGFDQYANVRPTKILPGI--TPPLRNCGPGDLDWVIVRENSEGEY----SGHGGRAHRGLPEEVGTEVAIFTRVGVTRIMRYAFKLAQARPRKLLTVVTKSNAQRHGMVMWDEIAAEVATEFPDVTWDKMLVDAMTVRMTLKPETLDTIVATNLHADILSDLAGALAGSLGVAPTANI 267          
BLAST of EY744206 vs. ExPASy Swiss-Prot
Match: LYS12_YEAST (Homoisocitrate dehydrogenase, mitochondrial OS=Saccharomyces cerevisiae GN=LYS12 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.236e-11
Identity = 70/269 (26.02%), Postives = 111/269 (41.26%), Query Frame = 3
Query:   12 IGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAK-QSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR-----HGKLCSVDKANVLEASMFWRKRITAIAL-----KYPDVKLSHMYGDHAAMQLIPIPNSW-INCEKKHIGGLLSEEGSRITGK*GKPPPARLG 782
            IG EVI   K VL+   S  G+ F F ++  G       G  LP+ET+   K Q    L GA+      K E +  P   ++ +R  + +FAN+RP           +++ E  + +D+++VRE T  +Y    + Y     G  +   T+  +     RIA +A + A KR        L    K+NVL  S    + I          KY  +K +    D    +L   P  + +       G +LS+  + + G  G  P A +G
Sbjct:   34 IGKEVIPAGKQVLENLNSKHGLSFNFIDLYAGFQTFQETGKALPDETVKVLKEQCQGALFGAVQS-PTTKVEGYSSP---IVALRREMGLFANVRPV---------KSVEGEKGKPIDMVIVRENTEDLYIKIEKTYIDKATGTRVADATKRISEIATRRIATIALDIALKRLQTRGQATLTVTHKSNVLSQSDGLFREICKEVYESNKDKYGQIKYNEQIVDSMVYRLFREPQCFDVIVAPNLYGDILSDGAAALVGSLGVVPSANVG 289          
The following BLAST results are available for this feature:
BLAST of EY744206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 308
Match NameE-valueIdentityDescription
LEU3_STRAW2.822e-1430.713-isopropylmalate dehydrogenase OS=Streptomyces av... [more]
LEU3_CORA71.829e-1328.743-isopropylmalate dehydrogenase OS=Corynebacterium... [more]
TTUC5_AGRVI4.075e-1327.38Probable tartrate dehydrogenase/decarboxylase ttuC... [more]
TTUC4_AGRVI4.075e-1328.03Probable tartrate dehydrogenase/decarboxylase ttuC... [more]
TTUC3_AGRVI4.075e-1327.38Probable tartrate dehydrogenase/decarboxylase ttuC... [more]
TTUC2_AGRVI4.075e-1328.03Probable tartrate dehydrogenase/decarboxylase ttuC... [more]
TTUC1_AGRVI4.075e-1327.38Probable tartrate dehydrogenase/decarboxylase ttuC... [more]
LYS12_YEAST2.236e-1126.02Homoisocitrate dehydrogenase, mitochondrial OS=Sac... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-A11-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744206 ID=EY744206; Name=EY744206; organism=Citrus sinensis; type=EST; length=824bp
CCACGCGTCCGATCGGCCCCGAAGTCATCGCCGTCGCCAAAAACGTCCTC
AAGCTCGCTGGCTCTCTCGAAGGGATTGAATTTGCATTCCAAGAGATGCC
AATGGGGGGATCAGCCTTGGATTTGGTTGGAGTTCCGTTACCTGAGGAGA
CACTTGCAGCAGCGAAGCAATCTGATGCAGTTCTACTTGGCGCAATTGGA
GGGTATAAATGGGATAAAAATGAGAAACATTTGAAGCCAGAGACTGGATT
GCTTCAGATTCGAGAAGGTCTTAAAGTCTTTGCAAATTTGAGGCCAGCAA
CTGTTTTACCACAGTTAGTGGACTCTTCCACTTTGAAGAAGGAGGTTGCT
GAAGGTGTTGACCTTATGGTTGTAAGGGAGCTCACCGGAGGTATTTATTT
TGGAAAGCCCAGGGGCTATGGTGTTACTGAACATGGTGAGGAGATTGGCT
TCAATACAGAGGTTTATGCTGCCTACGAGGTGGATCGTATTGCTCGTGTT
GCTTTTGAGACTGCTCGGAAACGTCATGGAAAACTTTGCTCTGTTGATAA
AGCAAATGTCTTAGAGGCATCAATGTTTTGGAGAAAAAGAATCACGGCAA
TAGCCCTCAAGTATCCTGATGTTAAACTCTCACATATGTATGGCGACCAC
GCTGCAATGCAACTTATTCCCATCCCAAACAGTTGGATCAATTGTGAAAA
AAAACATATTGGGGGACTTTTATCGGAAGAGGGTTCAAGGATTACGGGAA
AGTAAGGAAAGCCCCCCCCCGCCCGTCTTGGGGAAATCGGACCTGGGACC
CTTTTAAACAAAAAATGGGTTCTG
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