EY744203

Overview
NameEY744203
Unique NameEY744203
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length980
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS6A_YEAST (26S protease regulatory subunit 6A OS=Saccharomyces cerevisiae GN=RPT5 PE=1 SV=3)

HSP 1 Score: 253.832 bits (647), Expect = 1.090e-66
Identity = 135/266 (50.75%), Postives = 181/266 (68.05%), Query Frame = 3
Query:   57 DDQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEED-----GANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVLSIWTSRYGEDFAGFVLGHQKPKATFFEARRAPNFSKMFLWKGEPNELL*RPFLTFEKGKIPPCVF 839
            D ++ +++T ++   ++LLDNEIR+ + ELQR + E +   EK+K+N+EKIK N+QLPYLV N+VE+++MN  ++ E       G N++LD+   GK  V+KTS+RQT+FLP+VGLVDPDKLKP DLVGVNKDSYLILDTLPSE+DSRVKAMEVDEKPTE Y+D+GGL+KQI EL+EAIVLPM   ++F  +G+R PKG L       G+         Q   ATF +   AP   +M++ +G     L R      K K P  +F
Sbjct:   19 DQEILNLSTQELQTRAKLLDNEIRIFRSELQRLSHENNVMLEKIKDNKEKIKNNRQLPYLVANVVEVMDMNEIEDKENSESTTQGGNVNLDNTAVGKAAVVKTSSRQTVFLPMVGLVDPDKLKPNDLVGVNKDSYLILDTLPSEFDSRVKAMEVDEKPTETYSDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPKGALMYGPPGTGKTLLARACAAQ-TNATFLKL-AAPQLVQMYIGEGAK---LVRDAFALAKEKAPTIIF 279          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS6A_SCHPO (26S protease regulatory subunit 6A OS=Schizosaccharomyces pombe GN=tbp1 PE=2 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 3.170e-66
Identity = 136/261 (52.11%), Postives = 175/261 (67.05%), Query Frame = 3
Query:   57 DDQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVLSIWTSRYGEDFAGFVLGHQKPKATFFEARRAPNFSKMFLWKGEPNELL*RPFLTFEKGKIPPCVF 839
            + ++ +   D++   +RLL+N+I+V+K E QR   E  +  EK+KENQEKI  NK LPYLVGN+VEIL+M P++   ++ AN + ++ R GK  V+KTSTRQTIFLP++GLV+P++L PGDL+GVNKDSYLI+D LPSEYDSRVKAMEVDEKPTE Y+DIGGL KQI EL EAIVLPM   ++F KLGV+PPKG L       G+         Q   ATF +   AP   +MF+  G     L R      K K P  +F
Sbjct:   28 EQEILAAGIDELNSRTRLLENDIKVMKSEFQRLTHEKSTMLEKIKENQEKISNNKMLPYLVGNVVEILDMQPDEVDVQESANQNSEATRVGKSAVIKTSTRQTIFLPLIGLVEPEELHPGDLIGVNKDSYLIIDKLPSEYDSRVKAMEVDEKPTERYSDIGGLSKQIEELFEAIVLPMQQADKFRKLGVKPPKGCLMFGPPGTGKTLLARACAAQS-NATFLKL-AAPQLVQMFIGDGAK---LVRDAFALAKEKSPAIIF 283          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS6A_DICDI (26S protease regulatory subunit 6A homolog OS=Dictyostelium discoideum GN=psmC3 PE=1 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.628e-62
Identity = 129/272 (47.43%), Postives = 176/272 (64.71%), Query Frame = 3
Query:   24 STAMVEDSNIEDDQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVLSIWTSRYGEDFAGFVLGHQKPKATFFEARRAPNFSKMFLWKGEPNELL*RPFLTFEKGKIPPCVF 839
            S    E   +  D++  MT D++ R ++LL+NE +VL+ E    +LE+DS ++++KEN +K+++N QLP+LV N+VEI++M  + E +              KCVV+K STRQTIFL   G+VD DKL+PGDLVG+NKDSY+ILDTLP EYDSRVKAME+DEKPTE+Y+DIGGL+KQI EL+EA+VLPMTHKERF  +G++PPKGVL       G+         Q   +T+ +    P   +MF+  G     L R      K K P  +F
Sbjct:   12 SLPQAEKEAVIPDEIFQMTADEVNRKAKLLENETKVLRSEHISKHLEMDSIQKRIKENNDKLQVNTQLPHLVANVVEIIDMVLDGETQPS------------KCVVVKASTRQTIFLAYPGIVDVDKLRPGDLVGINKDSYIILDTLPPEYDSRVKAMEIDEKPTEEYSDIGGLDKQIQELVEAVVLPMTHKERFESIGIKPPKGVLMYGPPGTGKTLLARACAAQ-TNSTYLKL-AGPQLVQMFIGDGAK---LVRDAFALAKEKGPTIIF 266          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS6A_ENCCU (26S protease regulatory subunit 6A OS=Encephalitozoon cuniculi GN=RPT5 PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 6.889e-37
Identity = 88/224 (39.29%), Postives = 128/224 (57.14%), Query Frame = 3
Query:  105 RLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEV--DEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVLSIWTSRYGEDFAGFVLGHQKPKATFFEARRAPNFSKMFLWKG 770
            R+L++E R+L+  +     ++ +    + EN E+I+LNKQLPYLVGN+VE+L+       E  G              V+  STR + +LP+ GL+   +L+PGDLV ++KD+ ++ + LP +YD +V  M +  D KP E Y DIGGLE+QI EL EAIVL +TH ERF KL ++PPKGVL       G+          K  ATF +    P   +M++  G
Sbjct:   26 RMLNSETRILQSRVNTIKHDISTKNASIAENMERIRLNKQLPYLVGNVVEVLD-------EHSG--------------VVNASTRMSSYLPITGLIPNSELRPGDLVALHKDTNIVFEKLPPDYDMKVGGMVLKSDAKPDETYEDIGGLERQIEELNEAIVLSLTHPERFEKLNIKPPKGVLMYGPPGTGKTLMARACA-SKTNATFLKL-AGPQLVQMYIGDG 226          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PSMR_AERPE (Proteasome-activating nucleotidase OS=Aeropyrum pernix GN=pan PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 4.095e-27
Identity = 68/164 (41.46%), Postives = 96/164 (58.54%), Query Frame = 3
Query:  156 NLELDSYKEKVKE-NQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644
            ++E+   K+KV+   +EKI L K+L Y    I ++L   P  EA        +D  R    VV+K+ST   + + V   VD   LKPG +V +N     I+D LP  YD  VKAMEV+E+P   + D+GGLE+QI E+ EA+VLP+ +   F +LG+ PPKGVL
Sbjct:   22 DVEIRILKDKVRSLTKEKISLQKELEYYKNEITKLLSP-PYIEAVVLEV---IDDNR----VVVKSSTGPNLIVNVAAGVDARSLKPGAIVALNNRGSTIVDVLPGRYDPLVKAMEVEERPKVFFKDVGGLEEQIREIYEAVVLPIKNPHLFRELGIDPPKGVL 177          

HSP 2 Score: 33.8834 bits (76), Expect = 4.095e-27
Identity = 19/49 (38.78%), Postives = 28/49 (57.14%), Query Frame = 1
Query:  634 KECFLYGPPGTGKTLLGSCLGTKSQKLPFLRPAGPPTFPKCFFGKGNQM 780
            K   L+GPPGTGKTLL   +  +++   F+R  G     K F G+G ++
Sbjct:  174 KGVLLHGPPGTGKTLLAKAVAGETE-ATFIRVVGSELVNK-FIGEGARL 220          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PSMR_METJA (Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii GN=pan PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 5.471e-26
Identity = 73/205 (35.61%), Postives = 116/205 (56.59%), Query Frame = 3
Query:   39 EDSNIEDDQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQ---EKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644
            ++SN+++D L     +++   +R+ + E R+LK EL++  LE ++  + +KEN+    ++   +  P +VG +V                  D   +RK   VV+K+ST  +  + V   V+PD L PG  V +N+ +  ++D LP   D R KAMEVDE+P   Y DIGGLEKQ+ E+ E + LP+ H E F K+G+ PPKG+L
Sbjct:   30 DNSNLKNDLLK----EELQEKARIAELESRILKLELEKKELERENL-QLMKENEILRRELDRMRVPPLIVGTVV------------------DKVGERK---VVVKSSTGPSFLVNVSHFVNPDDLAPGKRVCLNQQTLTVVDVLPENKDYRAKAMEVDERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGIL 208          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PSMR_METKA (Proteasome-activating nucleotidase OS=Methanopyrus kandleri GN=pan PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.541e-23
Identity = 82/249 (32.93%), Postives = 122/249 (49.00%), Query Frame = 3
Query:   96 RASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVLSIWTSRYGED-FAGFVLGHQKPKATFFEARRAPNFSKMFLWKGEPNELL*RPFLTFEKGKIPPCVF 839
            R  + L+ E+ + ++E      EL   +  +++ +  ++  K+ P +VG + EIL+         DG             V++K+ST       V   VD ++L+PG  V +N+ S  ++D LPSE DSRV AMEVDE P   Y+DIGGL++QI E+ E +  P+   E F K+GV PPKGVL       G+   A  V  H    ATF     AP   + F+ +G     L R      + K P  +F
Sbjct:   56 RRRKTLEKELEMERDEKAELREELRRKEVMIEKLRSDLQRMKKPPLIVGTVEEILD---------DGR------------VIVKSSTGPKFVSNVSPTVDRNELEPGANVALNQQSMAVVDVLPSEKDSRVLAMEVDESPDVSYDDIGGLDEQIREIREVVEKPLKEPELFEKVGVEPPKGVLLYGPPGTGKTLLAKAVANH--ADATFIRL-AAPELVQKFIGEG---ARLVRELFELAREKAPSIIF 277          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS6B_CAEEL (Probable 26S protease regulatory subunit 6B OS=Caenorhabditis elegans GN=rpt-3 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.187e-22
Identity = 55/190 (28.95%), Postives = 104/190 (54.74%), Query Frame = 3
Query:   75 MTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644
            +++DD I+ + L + ++  L+       LE  + ++++   QE++K  + +P ++G  +E ++ N                       ++ ++T    ++ V+ ++D + LKPG  V ++K S  ++D LP E DS ++ +  DEKP   Y DIGGL+ Q  E+ EA+ LP+TH E + ++G+ PP+GVL
Sbjct:   32 VSSDDYIKLTTL-ERQLAHLQVMEDYIKLETRNLEKELLHAQEEVKRIQSVPLVIGQFLEAVDQNH---------------------AIVGSTTGSNYYVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEADSSIQMLRPDEKPDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVL 199          

HSP 2 Score: 30.8018 bits (68), Expect = 1.187e-22
Identity = 16/45 (35.56%), Postives = 25/45 (55.56%), Query Frame = 1
Query:  646 LYGPPGTGKTLLGSCLGTKSQKLPFLRPAGPPTFPKCFFGKGNQM 780
            +YGPPG GKT+L   +   +    F+R  G   F + + G+G +M
Sbjct:  200 MYGPPGCGKTMLAKAVAANT-AASFIRVVG-SEFVQKYLGEGPRM 242          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PSMR_METHJ (Proteasome-activating nucleotidase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=pan PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.647e-22
Identity = 68/197 (34.52%), Postives = 103/197 (52.28%), Query Frame = 3
Query:  111 LDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVLSIWTSRYGEDFAGFVLGHQ 701
            L  +IR L+ + +    +   Y+ +V++ + +I+  K  P +VG I +I+                 DS R    VV+++S      + V   V+P  LK G    +N+ S  I++ LPS YDS+V  ME+ + PTE Y DIGGLEKQI E+ EA+ LPMT  + F K+G+ PPKGVL       G+      + H+
Sbjct:   35 LKEQIRQLESDKRYIETQKIRYEREVRKLKSEIEHLKTPPLIVGTITDII-----------------DSGR----VVVRSSAGPRFLVRVSQAVNPTTLKAGVRCTLNQQSLAIVEVLPSTYDSQVYGMELVDAPTETYEDIGGLEKQIMEIREAVELPMTRPDLFEKIGINPPKGVLLYGPPGTGKTLLAKAVAHE 210          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PSMR_THEON (Proteasome-activating nucleotidase OS=Thermococcus onnurineus (strain NA1) GN=pan PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 8.175e-22
Identity = 70/223 (31.39%), Postives = 116/223 (52.02%), Query Frame = 3
Query:   75 MTTDDI-IRASRLLDNEIRVLKEELQRTNLE---LDSYKEKVKENQEKIKLN----KQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVLSIWTSRYGEDFAGFVLGHQKPKATF 719
            M+ +D+ I+ S   D+ I  LK+ +++  L+   L++ KE+++    ++++     +Q P   G ++E+L+   ED A                  +++        + +   ++ + LKPG  V +++ +  I++ LPSE D  V   EV E+PT  YNDIGGL+KQ+ EL EAI LP+ H E F K+G+ PPKGVL       G+      L H+   ATF
Sbjct:    1 MSIEDVGIKPSEEYDDYIMYLKKRIRQLELQVRTLEADKERLERELSRLRMEMSRLRQPPAFAGTLIELLD---EDRA------------------IVQNYNGPRFVVRIAPWIERENLKPGARVALDQRTMAIVELLPSEKDPSVLGFEVIERPTVSYNDIGGLDKQLQELREAIELPLKHPELFEKVGIEPPKGVLLYGPPGCGKTLMAKALAHE-VNATF 201          
The following BLAST results are available for this feature:
BLAST of EY744203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
PRS6A_YEAST1.090e-6650.7526S protease regulatory subunit 6A OS=Saccharomyce... [more]
PRS6A_SCHPO3.170e-6652.1126S protease regulatory subunit 6A OS=Schizosaccha... [more]
PRS6A_DICDI1.628e-6247.4326S protease regulatory subunit 6A homolog OS=Dict... [more]
PRS6A_ENCCU6.889e-3739.2926S protease regulatory subunit 6A OS=Encephalitoz... [more]
PSMR_AERPE4.095e-2741.46Proteasome-activating nucleotidase OS=Aeropyrum pe... [more]
PSMR_METJA5.471e-2635.61Proteasome-activating nucleotidase OS=Methanocaldo... [more]
PSMR_METKA2.541e-2332.93Proteasome-activating nucleotidase OS=Methanopyrus... [more]
PRS6B_CAEEL1.187e-2228.95Probable 26S protease regulatory subunit 6B OS=Cae... [more]
PSMR_METHJ1.647e-2234.52Proteasome-activating nucleotidase OS=Methanospiri... [more]
PSMR_THEON8.175e-2231.39Proteasome-activating nucleotidase OS=Thermococcus... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-A08-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744203 ID=EY744203; Name=EY744203; organism=Citrus sinensis; type=EST; length=980bp
CAAAAAATCAATAATCACTCATGTCTACGGCCATGGTCGAAGATTCTAAC
ATCGAAGATGATCAATTGTCGTCGATGACCACGGACGATATTATCCGCGC
CTCGCGTCTACTTGATAATGAAATCCGCGTTCTCAAGGAAGAGCTGCAAA
GAACAAATCTTGAGTTGGATTCGTACAAGGAAAAGGTTAAAGAGAATCAG
GAGAAGATTAAGCTCAACAAGCAGCTTCCTTATTTGGTGGGAAACATTGT
TGAGATTTTGGAGATGAATCCTGAGGACGAGGCAGAGGAAGATGGTGCAA
ATATTGATCTTGACTCACAGAGGAAGGGTAAATGTGTAGTGTTGAAAACA
TCCACCCGTCAGACCATCTTTCTTCCAGTAGTTGGGCTTGTTGATCCTGA
TAAGTTGAAACCTGGTGATCTGGTTGGAGTGAATAAGGATAGTTACTTGA
TTTTGGACACACTGCCTTCTGAATATGATTCACGGGTGAAGGCAATGGAA
GTTGATGAGAAACCAACCGAAGATTATAATGACATTGGAGGGCTAGAGAA
GCAGATCCCAGAACTCATTGAAGCTATTGTGCTGCCAATGACACACAAAG
AGCGTTTCGGAAAGTTGGGGGTTCGTCCACCTAAAGGAGTGCTTTCTATA
TGGACCTCCCGGTACGGGGAAGACTTTGCTGGGTTCGTGCTTGGGCACCA
AAAGCCAAAAGCTACCTTTTTTGAGGCCCGCAGGGCCCCCAACTTTTCCA
AAATGTTTCTTTGGAAAGGGGAACCAAATGAACTTTTGTGAAGGCCTTTT
TTAACCTTTGAAAAGGGAAAAATCCCCCCCTGTGTTTTTTTTTCCTCACA
ATATAATTTGACCCCCTTTTTGTGAAAAAAACCGGGTTTGAAAACGGAAA
AAAAATGTGGGAAAAAAAAGGGGGGGGGGCACACAAAAAAATTTTATTTA
AAAATTTTTCCCACAAATTCTCCCCATAAA
back to top