EY744203

Overview
NameEY744203
Unique NameEY744203
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length980
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PS10B_ARATH (26S protease regulatory subunit S10B homolog B OS=Arabidopsis thaliana GN=RPT4B PE=2 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 3.431e-13
Identity = 51/179 (28.49%), Postives = 85/179 (47.49%), Query Frame = 3
Query:  111 LDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIV-EILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644
            L++ +R  +E L+    E +  ++ +K  Q            VG I+ E+L                LD++R    +++K S+     +     VD +KL  G  V ++  +  I+  LP E D  V  M  ++     Y+ +GGL  QI EL E+I LP+ + E F ++G++PPKGVL
Sbjct:   28 LESRVRTARENLRAAKKEFNKTEDDLKSLQS-----------VGQIIGEVLR--------------PLDNER----LIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVL 177          

HSP 2 Score: 31.5722 bits (70), Expect = 3.431e-13
Identity = 13/22 (59.09%), Postives = 15/22 (68.18%), Query Frame = 1
Query:  634 KECFLYGPPGTGKTLLGSCLGT 699
            K   LYGPPGTGKTLL   + +
Sbjct:  174 KGVLLYGPPGTGKTLLARAIAS 195          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PS10A_ARATH (26S protease regulatory subunit 10B homolog A OS=Arabidopsis thaliana GN=RPT4A PE=2 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 4.457e-13
Identity = 51/179 (28.49%), Postives = 85/179 (47.49%), Query Frame = 3
Query:  111 LDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIV-EILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644
            L++ +R  +E L+    E +  ++ +K  Q            VG I+ E+L                LD++R    +++K S+     +     VD +KL  G  V ++  +  I+  LP E D  V  M  ++     Y+ +GGL  QI EL E+I LP+ + E F ++G++PPKGVL
Sbjct:   28 LESRVRTARENLRGAKKEFNKTEDDLKSLQS-----------VGQIIGEVLR--------------PLDNER----LIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVL 177          

HSP 2 Score: 31.5722 bits (70), Expect = 4.457e-13
Identity = 13/22 (59.09%), Postives = 15/22 (68.18%), Query Frame = 1
Query:  634 KECFLYGPPGTGKTLLGSCLGT 699
            K   LYGPPGTGKTLL   + +
Sbjct:  174 KGVLLYGPPGTGKTLLARAIAS 195          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS8_XENLA (26S protease regulatory subunit 8 OS=Xenopus laevis GN=psmc5 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.183e-12
Identity = 49/169 (28.99%), Postives = 79/169 (46.75%), Query Frame = 3
Query:  138 EELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644
            + L+R   + +    KV+  +E+++L ++    VG +V  ++                      K V++K        + V   +D + + P   V +  DSY +   LP++ D  V  M V++ P   Y  IGGL+KQI E+ E I LP+ H E F  LG+  PKGVL
Sbjct:   35 QNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDK---------------------KKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVL 182          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS8_DICDI (26S protease regulatory subunit 8 OS=Dictyostelium discoideum GN=psmC5 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.183e-12
Identity = 58/178 (32.58%), Postives = 80/178 (44.94%), Query Frame = 3
Query:  111 LDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644
            L+N +R+LKEELQ          E VK              L+G    ++++NPE                 GK VV    T           VD  KL P     +  +SY +   LP++ D  V  M+V++ P   Y+ +GGL+KQI E+ E I LP+ H E F  LG+  PKGVL
Sbjct:   48 LNNRVRMLKEELQLLTNPGSHVAEVVK--------------LMGKNKVLVKVNPE-----------------GKFVVDIDPT-----------VDIAKLTPSTRAALKHESYTLHRILPNKIDPLVSLMKVEKIPDSTYDMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVL 183          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS8_YEAST (26S protease regulatory subunit 8 homolog OS=Saccharomyces cerevisiae GN=RPT6 PE=1 SV=4)

HSP 1 Score: 73.559 bits (179), Expect = 2.018e-12
Identity = 54/206 (26.21%), Postives = 95/206 (46.12%), Query Frame = 3
Query:   27 TAMVEDSNIEDDQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644
            TA V  SNI  +   S       +  +  + +IR   E ++R   + ++  +KV+  +++++L ++    VG +++I+                       K V++K        + V   ++   LK    V +  DSY++   L ++ D  V  M V++ P   Y+ +GGL KQI E+ E I LP+ H E F  LG+  PKGV+
Sbjct:    2 TAAVTSSNIVLETHESGIKPYFEQKIQETELKIRSKTENVRRLEAQRNALNDKVRFIKDELRLLQEPGSYVGEVIKIVS---------------------DKKVLVKVQPEGKYIVDVAKDINVKDLKASQRVCLRSDSYMLHKVLENKADPLVSLMMVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVI 186          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS8_RAT (26S protease regulatory subunit 8 OS=Rattus norvegicus GN=Psmc5 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.018e-12
Identity = 49/169 (28.99%), Postives = 79/169 (46.75%), Query Frame = 3
Query:  138 EELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644
            + L+R   + +    KV+  +E+++L ++    VG +V  ++                      K V++K        + V   +D + + P   V +  DSY +   LP++ D  V  M V++ P   Y  IGGL+KQI E+ E I LP+ H E F  LG+  PKGVL
Sbjct:   40 QNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDK---------------------KKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVL 187          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS8_PIG (26S protease regulatory subunit 8 OS=Sus scrofa GN=PSMC5 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.018e-12
Identity = 49/169 (28.99%), Postives = 79/169 (46.75%), Query Frame = 3
Query:  138 EELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644
            + L+R   + +    KV+  +E+++L ++    VG +V  ++                      K V++K        + V   +D + + P   V +  DSY +   LP++ D  V  M V++ P   Y  IGGL+KQI E+ E I LP+ H E F  LG+  PKGVL
Sbjct:   40 QNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDK---------------------KKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVL 187          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS8_MOUSE (26S protease regulatory subunit 8 OS=Mus musculus GN=Psmc5 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.018e-12
Identity = 49/169 (28.99%), Postives = 79/169 (46.75%), Query Frame = 3
Query:  138 EELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644
            + L+R   + +    KV+  +E+++L ++    VG +V  ++                      K V++K        + V   +D + + P   V +  DSY +   LP++ D  V  M V++ P   Y  IGGL+KQI E+ E I LP+ H E F  LG+  PKGVL
Sbjct:   40 QNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDK---------------------KKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVL 187          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS8_HUMAN (26S protease regulatory subunit 8 OS=Homo sapiens GN=PSMC5 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.018e-12
Identity = 49/169 (28.99%), Postives = 79/169 (46.75%), Query Frame = 3
Query:  138 EELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644
            + L+R   + +    KV+  +E+++L ++    VG +V  ++                      K V++K        + V   +D + + P   V +  DSY +   LP++ D  V  M V++ P   Y  IGGL+KQI E+ E I LP+ H E F  LG+  PKGVL
Sbjct:   40 QNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDK---------------------KKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVL 187          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS8_BOVIN (26S protease regulatory subunit 8 OS=Bos taurus GN=PSMC5 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.018e-12
Identity = 49/169 (28.99%), Postives = 79/169 (46.75%), Query Frame = 3
Query:  138 EELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644
            + L+R   + +    KV+  +E+++L ++    VG +V  ++                      K V++K        + V   +D + + P   V +  DSY +   LP++ D  V  M V++ P   Y  IGGL+KQI E+ E I LP+ H E F  LG+  PKGVL
Sbjct:   40 QNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDK---------------------KKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVL 187          
The following BLAST results are available for this feature:
BLAST of EY744203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
PS10B_ARATH3.431e-1328.4926S protease regulatory subunit S10B homolog B OS=... [more]
PS10A_ARATH4.457e-1328.4926S protease regulatory subunit 10B homolog A OS=A... [more]
PRS8_XENLA1.183e-1228.9926S protease regulatory subunit 8 OS=Xenopus laevi... [more]
PRS8_DICDI1.183e-1232.5826S protease regulatory subunit 8 OS=Dictyostelium... [more]
PRS8_YEAST2.018e-1226.2126S protease regulatory subunit 8 homolog OS=Sacch... [more]
PRS8_RAT2.018e-1228.9926S protease regulatory subunit 8 OS=Rattus norveg... [more]
PRS8_PIG2.018e-1228.9926S protease regulatory subunit 8 OS=Sus scrofa GN... [more]
PRS8_MOUSE2.018e-1228.9926S protease regulatory subunit 8 OS=Mus musculus ... [more]
PRS8_HUMAN2.018e-1228.9926S protease regulatory subunit 8 OS=Homo sapiens ... [more]
PRS8_BOVIN2.018e-1228.9926S protease regulatory subunit 8 OS=Bos taurus GN... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-A08-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744203 ID=EY744203; Name=EY744203; organism=Citrus sinensis; type=EST; length=980bp
CAAAAAATCAATAATCACTCATGTCTACGGCCATGGTCGAAGATTCTAAC
ATCGAAGATGATCAATTGTCGTCGATGACCACGGACGATATTATCCGCGC
CTCGCGTCTACTTGATAATGAAATCCGCGTTCTCAAGGAAGAGCTGCAAA
GAACAAATCTTGAGTTGGATTCGTACAAGGAAAAGGTTAAAGAGAATCAG
GAGAAGATTAAGCTCAACAAGCAGCTTCCTTATTTGGTGGGAAACATTGT
TGAGATTTTGGAGATGAATCCTGAGGACGAGGCAGAGGAAGATGGTGCAA
ATATTGATCTTGACTCACAGAGGAAGGGTAAATGTGTAGTGTTGAAAACA
TCCACCCGTCAGACCATCTTTCTTCCAGTAGTTGGGCTTGTTGATCCTGA
TAAGTTGAAACCTGGTGATCTGGTTGGAGTGAATAAGGATAGTTACTTGA
TTTTGGACACACTGCCTTCTGAATATGATTCACGGGTGAAGGCAATGGAA
GTTGATGAGAAACCAACCGAAGATTATAATGACATTGGAGGGCTAGAGAA
GCAGATCCCAGAACTCATTGAAGCTATTGTGCTGCCAATGACACACAAAG
AGCGTTTCGGAAAGTTGGGGGTTCGTCCACCTAAAGGAGTGCTTTCTATA
TGGACCTCCCGGTACGGGGAAGACTTTGCTGGGTTCGTGCTTGGGCACCA
AAAGCCAAAAGCTACCTTTTTTGAGGCCCGCAGGGCCCCCAACTTTTCCA
AAATGTTTCTTTGGAAAGGGGAACCAAATGAACTTTTGTGAAGGCCTTTT
TTAACCTTTGAAAAGGGAAAAATCCCCCCCTGTGTTTTTTTTTCCTCACA
ATATAATTTGACCCCCTTTTTGTGAAAAAAACCGGGTTTGAAAACGGAAA
AAAAATGTGGGAAAAAAAAGGGGGGGGGGCACACAAAAAAATTTTATTTA
AAAATTTTTCCCACAAATTCTCCCCATAAA
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