EY744203

Overview
NameEY744203
Unique NameEY744203
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length980
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS8_NAEFO (26S protease regulatory subunit 8 homolog OS=Naegleria fowleri PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.636e-12
Identity = 48/187 (25.67%), Postives = 85/187 (45.45%), Query Frame = 3
Query:  138 EELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVLSIWTSRYGEDFAGFVLGH 698
            E L+R   + +    +V+  +E+++  ++    VG +V+++                       K V++K S      + +   ++   L PG  V +  DSY +   LP++ D  V  M+V++ P   Y  +GGL++QI E+ E I LP+ H E F  LG+  PKGV+       G+      + H
Sbjct:   47 ENLRRLQAQRNELNGRVRSLKEELQQLQEPGSHVGEVVKVMGK---------------------KKVLIKISQEGKYIVDIDKSIELKDLTPGVRVALRNDSYALHKILPNKIDPLVSLMKVEKVPDATYEMVGGLDEQIKEIKEVIELPIKHPELFESLGIAQPKGVIMYGPPGTGKTLLARAVAH 212          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: MPA_MYCTU (Proteasome-associated ATPase OS=Mycobacterium tuberculosis GN=mpa PE=1 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 3.562e-12
Identity = 32/83 (38.55%), Postives = 51/83 (61.45%), Query Frame = 3
Query:  396 PDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644
            P KL+PGD + V+  +    + +P    + V+ + ++E P   Y DIGGL +QI ++ +A+ LP  HKE + +  +RPPKGVL
Sbjct:  211 PRKLRPGDSLLVDTKAGYAFERIPK---AEVEDLVLEEVPDVSYADIGGLSRQIEQIRDAVELPFLHKELYREYSLRPPKGVL 290          

HSP 2 Score: 28.8758 bits (63), Expect = 3.562e-12
Identity = 12/26 (46.15%), Postives = 14/26 (53.85%), Query Frame = 1
Query:  634 KECFLYGPPGTGKTLLGSCLGTKSQK 711
            K   LYGPPG GKTL+   +     K
Sbjct:  287 KGVLLYGPPGCGKTLIAKAVANSLAK 312          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: MPA_MYCLE (Proteasome-associated ATPase OS=Mycobacterium leprae GN=mpa PE=3 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 3.562e-12
Identity = 32/83 (38.55%), Postives = 51/83 (61.45%), Query Frame = 3
Query:  396 PDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644
            P KL+PGD + V+  +    + +P    + V+ + ++E P   Y DIGGL +QI ++ +A+ LP  HKE + +  +RPPKGVL
Sbjct:  211 PRKLRPGDSLLVDPKAGYAFERVPK---AEVEDLVLEEVPDVSYQDIGGLTRQIEQIRDAVELPFLHKELYREYALRPPKGVL 290          

HSP 2 Score: 28.8758 bits (63), Expect = 3.562e-12
Identity = 12/26 (46.15%), Postives = 14/26 (53.85%), Query Frame = 1
Query:  634 KECFLYGPPGTGKTLLGSCLGTKSQK 711
            K   LYGPPG GKTL+   +     K
Sbjct:  287 KGVLLYGPPGCGKTLIAKAVANSLAK 312          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: MPA_MYCBO (Proteasome-associated ATPase OS=Mycobacterium bovis GN=mpa PE=3 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 3.562e-12
Identity = 32/83 (38.55%), Postives = 51/83 (61.45%), Query Frame = 3
Query:  396 PDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644
            P KL+PGD + V+  +    + +P    + V+ + ++E P   Y DIGGL +QI ++ +A+ LP  HKE + +  +RPPKGVL
Sbjct:  211 PRKLRPGDSLLVDTKAGYAFERIPK---AEVEDLVLEEVPDVSYADIGGLSRQIEQIRDAVELPFLHKELYREYSLRPPKGVL 290          

HSP 2 Score: 28.8758 bits (63), Expect = 3.562e-12
Identity = 12/26 (46.15%), Postives = 14/26 (53.85%), Query Frame = 1
Query:  634 KECFLYGPPGTGKTLLGSCLGTKSQK 711
            K   LYGPPG GKTL+   +     K
Sbjct:  287 KGVLLYGPPGCGKTLIAKAVANSLAK 312          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS10_SCHPO (Probable 26S protease subunit rpt4 OS=Schizosaccharomyces pombe GN=rpt4 PE=2 SV=2)

HSP 1 Score: 61.6178 bits (148), Expect = 4.686e-12
Identity = 48/167 (28.74%), Postives = 81/167 (48.50%), Query Frame = 3
Query:  165 LDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPED--EAEEDGANI-----DLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644
            L+ YK  + +++E     K L +   ++V+  +   +D    +  G  I      LDS+R     ++K S+     +     VD   L  G  V ++  +  I+  LP E D  V  M +++     +  +GGL +QI EL E I LP+ + E F ++G++PPKGVL
Sbjct:    8 LEKYKSYLLQHREWDSKLKDLRFGNRDLVKKYDKTEDDIKSLQSVGQIIGEVLKQLDSER----FIVKASSGPRYVVGCRNNVDQSHLVQGVRVSLDMTTLTIMRILPREVDPLVYNMSIEDPGDISFAGVGGLNEQIRELREVIELPLKNPELFLRVGIKPPKGVL 170          

HSP 2 Score: 30.8018 bits (68), Expect = 4.686e-12
Identity = 13/16 (81.25%), Postives = 13/16 (81.25%), Query Frame = 1
Query:  634 KECFLYGPPGTGKTLL 681
            K   LYGPPGTGKTLL
Sbjct:  167 KGVLLYGPPGTGKTLL 182          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: MPA_RHOER (Proteasome-associated ATPase OS=Rhodococcus erythropolis GN=mpa PE=1 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 6.009e-12
Identity = 43/156 (27.56%), Postives = 80/156 (51.28%), Query Frame = 3
Query:  201 EKIKLNKQLPYL-VGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFL-PVVGLVDPD------KLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644
            + ++LN+ L  +  G   ++ E++   E  +DG    +      + +V   +    +F  P   ++  D      KL+PGD + V+  +    + +P    + V+ + ++E P   Y+DIGGL +QI ++ +A+ LP  HK+ F +  +RPPKGVL
Sbjct:  120 QTVRLNEALTIVEAGTYEQVGEISTLREVLDDGLRALVVGHADEERIVWLAAPLAAVFADPEADIIAYDADSPTRKLRPGDSLLVDTKAGYAFERIPK---AEVEDLVLEEVPDVHYDDIGGLGRQIEQIRDAVELPFLHKDLFHEYSLRPPKGVL 272          

HSP 2 Score: 28.8758 bits (63), Expect = 6.009e-12
Identity = 12/26 (46.15%), Postives = 14/26 (53.85%), Query Frame = 1
Query:  634 KECFLYGPPGTGKTLLGSCLGTKSQK 711
            K   LYGPPG GKTL+   +     K
Sbjct:  269 KGVLLYGPPGCGKTLIAKAVANSLAK 294          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS8_DROME (26S protease regulatory subunit 8 OS=Drosophila melanogaster GN=Pros45 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 1.002e-11
Identity = 48/169 (28.40%), Postives = 81/169 (47.93%), Query Frame = 3
Query:  138 EELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644
            + L+R   + +    KV+  +E+++L ++    VG +V+     P D+                K V++K        + +   +D + + P   V +  +SY +   LP++ D  V  M V++ P   Y  +GGL+KQI E+ E I LP+ H E F  LG+  PKGVL
Sbjct:   39 QNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK-----PMDK----------------KKVLVKVHPEGKFVVDLDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVL 186          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: Y1297_ARCFU (Cell division cycle protein 48 homolog AF_1297 OS=Archaeoglobus fulgidus GN=AF_1297 PE=3 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 6.249e-11
Identity = 32/79 (40.51%), Postives = 47/79 (59.49%), Query Frame = 3
Query:  441 SYLILDTLPSEYD--SRVKAMEVDEKPTED---------YNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644
            +++I  T PS     +R  A+E+ EKP E+         Y DIGGL++++  + E I LP+ H E F +LG+ PPKGVL
Sbjct:  142 TFVITATRPSGVVVVTRNTAIELKEKPAEEVKRAVPDVTYEDIGGLKRELRLVREMIELPLKHPELFQRLGIEPPKGVL 220          

HSP 2 Score: 33.8834 bits (76), Expect = 6.249e-11
Identity = 18/48 (37.50%), Postives = 26/48 (54.17%), Query Frame = 1
Query:  634 KECFLYGPPGTGKTLLGSCLGTKSQKLPFLRPAGPPTFPKCFFGKGNQ 777
            K   LYGPPGTGKTL+   +  +     F+  +GP    K ++G+  Q
Sbjct:  217 KGVLLYGPPGTGKTLIAKAVANEVD-AHFIPISGPEIMSK-YYGESEQ 262          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS8_MANSE (26S protease regulatory subunit 8 OS=Manduca sexta PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.493e-11
Identity = 48/169 (28.40%), Postives = 80/169 (47.34%), Query Frame = 3
Query:  138 EELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644
            + L+R   + +    KV+  +E+++L ++    VG +V+     P D+                K V++K        + +   VD + +     V +  +SY +   LP++ D  V  M V++ P   Y  +GGL+KQI E+ E I LP+ H E F  LG+  PKGVL
Sbjct:   36 QNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK-----PMDK----------------KKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVL 183          
The following BLAST results are available for this feature:
BLAST of EY744203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
PRS8_NAEFO2.636e-1225.6726S protease regulatory subunit 8 homolog OS=Naegl... [more]
MPA_MYCTU3.562e-1238.55Proteasome-associated ATPase OS=Mycobacterium tube... [more]
MPA_MYCLE3.562e-1238.55Proteasome-associated ATPase OS=Mycobacterium lepr... [more]
MPA_MYCBO3.562e-1238.55Proteasome-associated ATPase OS=Mycobacterium bovi... [more]
PRS10_SCHPO4.686e-1228.74Probable 26S protease subunit rpt4 OS=Schizosaccha... [more]
MPA_RHOER6.009e-1227.56Proteasome-associated ATPase OS=Rhodococcus erythr... [more]
PRS8_DROME1.002e-1128.4026S protease regulatory subunit 8 OS=Drosophila me... [more]
Y1297_ARCFU6.249e-1140.51Cell division cycle protein 48 homolog AF_1297 OS=... [more]
PRS8_MANSE6.493e-1128.4026S protease regulatory subunit 8 OS=Manduca sexta... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-A08-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744203 ID=EY744203; Name=EY744203; organism=Citrus sinensis; type=EST; length=980bp
CAAAAAATCAATAATCACTCATGTCTACGGCCATGGTCGAAGATTCTAAC
ATCGAAGATGATCAATTGTCGTCGATGACCACGGACGATATTATCCGCGC
CTCGCGTCTACTTGATAATGAAATCCGCGTTCTCAAGGAAGAGCTGCAAA
GAACAAATCTTGAGTTGGATTCGTACAAGGAAAAGGTTAAAGAGAATCAG
GAGAAGATTAAGCTCAACAAGCAGCTTCCTTATTTGGTGGGAAACATTGT
TGAGATTTTGGAGATGAATCCTGAGGACGAGGCAGAGGAAGATGGTGCAA
ATATTGATCTTGACTCACAGAGGAAGGGTAAATGTGTAGTGTTGAAAACA
TCCACCCGTCAGACCATCTTTCTTCCAGTAGTTGGGCTTGTTGATCCTGA
TAAGTTGAAACCTGGTGATCTGGTTGGAGTGAATAAGGATAGTTACTTGA
TTTTGGACACACTGCCTTCTGAATATGATTCACGGGTGAAGGCAATGGAA
GTTGATGAGAAACCAACCGAAGATTATAATGACATTGGAGGGCTAGAGAA
GCAGATCCCAGAACTCATTGAAGCTATTGTGCTGCCAATGACACACAAAG
AGCGTTTCGGAAAGTTGGGGGTTCGTCCACCTAAAGGAGTGCTTTCTATA
TGGACCTCCCGGTACGGGGAAGACTTTGCTGGGTTCGTGCTTGGGCACCA
AAAGCCAAAAGCTACCTTTTTTGAGGCCCGCAGGGCCCCCAACTTTTCCA
AAATGTTTCTTTGGAAAGGGGAACCAAATGAACTTTTGTGAAGGCCTTTT
TTAACCTTTGAAAAGGGAAAAATCCCCCCCTGTGTTTTTTTTTCCTCACA
ATATAATTTGACCCCCTTTTTGTGAAAAAAACCGGGTTTGAAAACGGAAA
AAAAATGTGGGAAAAAAAAGGGGGGGGGGCACACAAAAAAATTTTATTTA
AAAATTTTTCCCACAAATTCTCCCCATAAA
back to top