EY744203

Overview
NameEY744203
Unique NameEY744203
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length980
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS6B_ARATH (26S protease regulatory subunit 6B homolog OS=Arabidopsis thaliana GN=RPT3 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.147e-21
Identity = 49/193 (25.39%), Postives = 98/193 (50.78%), Query Frame = 3
Query:   66 LSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644
            LS+   +D+    + L+ ++     + +    E  + K ++   QE++K  + +P ++G  +E+++ N                       ++ ++T    ++ ++  ++ + LKP   V +++ S  ++D LP E DS +  +   EKP   YNDIGG + Q  E+ EA+ LP+TH E + ++G+ PP+GVL
Sbjct:   22 LSTADEEDLYGRLKSLERQLEFTDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNG---------------------IVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVL 193          

HSP 2 Score: 33.4982 bits (75), Expect = 2.147e-21
Identity = 18/45 (40.00%), Postives = 26/45 (57.78%), Query Frame = 1
Query:  646 LYGPPGTGKTLLGSCLGTKSQKLPFLRPAGPPTFPKCFFGKGNQM 780
            LYGPPGTGKT+L   +   +    F+R  G   F + + G+G +M
Sbjct:  194 LYGPPGTGKTMLAKAVANHT-TAAFIRVVG-SEFVQKYLGEGPRM 236          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PSMR_METTH (Proteasome-activating nucleotidase OS=Methanobacterium thermoautotrophicum GN=pan PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 3.107e-21
Identity = 80/258 (31.01%), Postives = 125/258 (48.45%), Query Frame = 3
Query:   81 TDDIIRASRLLDNEIRVLKEELQRTNLEL-----DSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVLSIWTSRYGEDFAGFVLGHQKPKATFFEARRAPNFSKMFLWKGEPNELL*RPFLTFEKGKIPPCVF 839
            + ++++    L  E+R+LKEE  +T   L        K+K+    E+ +L++++  L G I E     P   A        LD  R    V +K++T     +     +D  +L+PG  V +N+ ++ I+D LPSE D  V  MEV+EKP   Y  IGGLE+Q+ E+ E + LP+   E F K+G+ PPKGVL       G+      + H+   ATF +   A  F + ++ +G     L R      K K P  +F
Sbjct:    5 SQNVLKKIEDLKKEVRMLKEENSKTKRNLMWKIRKLEKDKLLIENERTRLDREVKSLRGEI-ERFRTPPLVIATVTEV---LDDHR----VAVKSTTGPHFVINYSRFIDRKQLEPGARVALNQQTFSIVDVLPSEKDPVVTGMEVEEKPDVSYEQIGGLEEQVREVKETVELPLKKPELFEKIGIEPPKGVLLYGPPGTGKTLLAKAVAHE-TNATFIKI-VASEFVRKYIGEG---ARLVRGVFELAKEKSPSIIF 249          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PSMR_METMJ (Proteasome-activating nucleotidase OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=pan PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 3.107e-21
Identity = 58/197 (29.44%), Postives = 102/197 (51.78%), Query Frame = 3
Query:  111 LDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVLSIWTSRYGEDFAGFVLGHQ 701
            L  + R ++ E +    +   Y+ ++++ + +I+  +  P ++G + +++                 D+ R    V++++S      +    L+DPD LKPG    +N+ S  I+D LP+ YD+++  ME+ E P E Y +IGGLE QI E+ EA+ LP+T  + F K+G+ PPKGVL       G+      + HQ
Sbjct:   35 LREQFRQMESEKRYVETQKIRYERELRKLKSEIEQLRSPPLVIGTVTDVI-----------------DNSR----VIVRSSAGPRFLVRTSQLIDPDLLKPGVRCTLNQQSLAIVDVLPTSYDAQIYGMELVESPEETYENIGGLEPQIEEIREAVELPLTKPQLFEKVGISPPKGVLLYGPPGTGKTLLARAVAHQ 210          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PSMR_PYRKO (Proteasome-activating nucleotidase OS=Pyrococcus kodakaraensis GN=pan PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.542e-20
Identity = 62/177 (35.03%), Postives = 95/177 (53.67%), Query Frame = 3
Query:  126 RVLKEELQRTNLELDSYKEKVKENQEKIKLN----KQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644
            R+ + ELQ   LE D  KE+++    ++++     +Q P   GN++E+L                 D +R     +++        + +   ++ DKLKPG  V +++ +  I++ LPSE D  V   EV E+P   YNDIGGLEKQ+ EL EAI LP+ H E F ++G+ PPKGVL
Sbjct:   23 RIRQLELQVRTLEAD--KERLERELSRLRMEMSRLRQPPAFAGNVIEVL-----------------DDER----AIVQNYNGPRFVVRIAPWIERDKLKPGARVALDQRTMAIVELLPSEKDPSVLGFEVIERPKVTYNDIGGLEKQLQELREAIELPLKHPELFEQVGIEPPKGVL 176          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS6B_YEAST (26S protease regulatory subunit 6B homolog OS=Saccharomyces cerevisiae GN=RPT3 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.544e-20
Identity = 49/201 (24.38%), Postives = 97/201 (48.26%), Query Frame = 3
Query:   42 DSNIEDDQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644
            +  + ++   S    DI    + L+ E  +L  +      E    K ++K  QE++K  + +P ++G  +E ++ N                       ++ ++T  +  + ++  +D + LKP   V +++ S  ++D LP + DS +  M  +EKP   Y D+GGL+ Q  E+ EA+ LP+   + + ++G+ PP+GVL
Sbjct:   31 NGTVNNNSALSNVNSDIYFKLKKLEKEYELLTLQEDYIKDEQRHLKRELKRAQEEVKRIQSVPLVIGQFLEPIDQNTG---------------------IVSSTTGMSYVVRILSTLDRELLKPSMSVALHRHSNALVDILPPDSDSSISVMGENEKPDVTYADVGGLDMQKQEIREAVELPLVQADLYEQIGIDPPRGVL 210          

HSP 2 Score: 34.2686 bits (77), Expect = 6.544e-20
Identity = 20/45 (44.44%), Postives = 26/45 (57.78%), Query Frame = 1
Query:  646 LYGPPGTGKTLLGSCLGTKSQKLPFLRPAGPPTFPKCFFGKGNQM 780
            LYGPPGTGKT+L   +   S K  F+R  G   F   + G+G +M
Sbjct:  211 LYGPPGTGKTMLVKAV-ANSTKAAFIRVNG-SEFVHKYLGEGPRM 253          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS6B_ASPNG (26S protease regulatory subunit 6B homolog OS=Aspergillus niger GN=tbpA PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 6.545e-20
Identity = 47/161 (29.19%), Postives = 85/161 (52.80%), Query Frame = 3
Query:  162 ELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644
            E  S K ++   QE+IK  + +P ++G  +E ++ N                       ++++ST     + ++  +D +KLKP   V +++ S  ++D LP E DS +  +  +EKP   Y D+GGL+ Q  E+ EA+ LP+T  + + ++G+ PP+GVL
Sbjct:   65 EQRSLKRELVRAQEEIKRIQSVPLVIGQFMEAIDQNTG---------------------IVQSSTGSNYVVRILSTLDREKLKPSSSVALHRHSNALVDILPPEADSSIAMLGENEKPDVTYADVGGLDMQKQEIREAVELPLTQFDLYKQIGIDPPRGVL 204          

HSP 2 Score: 32.7278 bits (73), Expect = 6.545e-20
Identity = 19/45 (42.22%), Postives = 26/45 (57.78%), Query Frame = 1
Query:  646 LYGPPGTGKTLLGSCLGTKSQKLPFLRPAGPPTFPKCFFGKGNQM 780
            LYGPPGTGKT+L   +   S    F+R  G   F + + G+G +M
Sbjct:  205 LYGPPGTGKTMLVKAV-ANSTTASFIRVNG-SEFVQKYLGEGPRM 247          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS6B_DICDI (26S protease regulatory subunit 6B homolog OS=Dictyostelium discoideum GN=psmC4 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.305e-19
Identity = 53/209 (25.36%), Postives = 106/209 (50.72%), Query Frame = 3
Query:   87 DIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVLSIWTSRYGEDFAGFVLGHQKPKA 713
            D+ +  + L++++     + +    E  + K ++   QE++K  + +P L+G ++E+++ N                       ++++++  T+ + ++  +D + LKP   V + + S  ++DTLP E DS +  +  DEKP+E Y+DIGG + Q  E+ EA+ LP+TH   + ++G+ PP+GVL       G+      + H    A
Sbjct:   24 DLYQKMKSLESKLDFFNIQEEYIKYEYKNLKRELLHAQEEVKRIRSVPLLIGQLLEMVDSNTG---------------------IVQSTSGSTLCVRILSTIDRELLKPSASVALQRHSNALVDTLPPESDSSIHLLGADEKPSESYSDIGGGDIQKQEMREAVELPLTHHNLYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTSAA 211          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PSMR_METM5 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=pan PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.705e-19
Identity = 63/206 (30.58%), Postives = 106/206 (51.46%), Query Frame = 3
Query:   42 DSNIEDDQLSSMTTDDIIRASRLLDNEIRVLKEELQ-----RTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644
            D    D + + M   +    +++ + E +VL+ EL+     R N+++    E +K   +K+++    P ++G I                  +D  ++RK    V+K+ST     + +   VDPD + PG  V +N+ +  I++ LP E D R  AME++EKP   + DIGGL  QI ++ E + LP+ + E F K+G+ PPKGVL
Sbjct:    5 DDYSTDIEKNKMDLKEFKEKTQIAELESKVLRLELKNKDISRENVQIKKENEILKRELDKLRIP---PLILGTI------------------LDRVNERKA---VVKSSTGPNFLVNLSQFVDPDDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVL 186          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS7_SPIOL (26S protease regulatory subunit 7 OS=Spinacia oleracea GN=RPT1 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.872e-19
Identity = 44/92 (47.83%), Postives = 59/92 (64.13%), Query Frame = 3
Query:  378 VVGL---VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644
            VVGL   V P  ++ G  VGV+++ Y I   LP + D  V  M V+EKP   YND+GG ++QI ++ E + LPM H E+F KLG+ PPKGVL
Sbjct:  115 VVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVL 206          

HSP 2 Score: 33.4982 bits (75), Expect = 1.872e-19
Identity = 19/49 (38.78%), Postives = 26/49 (53.06%), Query Frame = 1
Query:  634 KECFLYGPPGTGKTLLGSCLGTKSQKLPFLRPAGPPTFPKCFFGKGNQM 780
            K    YGPPGTGKTLL   +  ++    F+R  G     K + G+G +M
Sbjct:  203 KGVLCYGPPGTGKTLLARAVANRTDAC-FIRVIGSELVQK-YVGEGARM 249          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS7_ORYSJ (26S protease regulatory subunit 7 OS=Oryza sativa subsp. japonica GN=RPT1A PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.872e-19
Identity = 44/92 (47.83%), Postives = 59/92 (64.13%), Query Frame = 3
Query:  378 VVGL---VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644
            VVGL   V P  ++ G  VGV+++ Y I   LP + D  V  M V+EKP   YND+GG ++QI ++ E + LPM H E+F KLG+ PPKGVL
Sbjct:  115 VVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVL 206          

HSP 2 Score: 33.4982 bits (75), Expect = 1.872e-19
Identity = 19/49 (38.78%), Postives = 26/49 (53.06%), Query Frame = 1
Query:  634 KECFLYGPPGTGKTLLGSCLGTKSQKLPFLRPAGPPTFPKCFFGKGNQM 780
            K    YGPPGTGKTLL   +  ++    F+R  G     K + G+G +M
Sbjct:  203 KGVLCYGPPGTGKTLLARAVANRTDAC-FIRVIGSELVQK-YVGEGARM 249          
The following BLAST results are available for this feature:
BLAST of EY744203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
PRS6B_ARATH2.147e-2125.3926S protease regulatory subunit 6B homolog OS=Arab... [more]
PSMR_METTH3.107e-2131.01Proteasome-activating nucleotidase OS=Methanobacte... [more]
PSMR_METMJ3.107e-2129.44Proteasome-activating nucleotidase OS=Methanoculle... [more]
PSMR_PYRKO1.542e-2035.03Proteasome-activating nucleotidase OS=Pyrococcus k... [more]
PRS6B_YEAST6.544e-2024.3826S protease regulatory subunit 6B homolog OS=Sacc... [more]
PRS6B_ASPNG6.545e-2029.1926S protease regulatory subunit 6B homolog OS=Aspe... [more]
PRS6B_DICDI1.305e-1925.3626S protease regulatory subunit 6B homolog OS=Dict... [more]
PSMR_METM51.705e-1930.58Proteasome-activating nucleotidase OS=Methanococcu... [more]
PRS7_SPIOL1.872e-1947.8326S protease regulatory subunit 7 OS=Spinacia oler... [more]
PRS7_ORYSJ1.872e-1947.8326S protease regulatory subunit 7 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-A08-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744203 ID=EY744203; Name=EY744203; organism=Citrus sinensis; type=EST; length=980bp
CAAAAAATCAATAATCACTCATGTCTACGGCCATGGTCGAAGATTCTAAC
ATCGAAGATGATCAATTGTCGTCGATGACCACGGACGATATTATCCGCGC
CTCGCGTCTACTTGATAATGAAATCCGCGTTCTCAAGGAAGAGCTGCAAA
GAACAAATCTTGAGTTGGATTCGTACAAGGAAAAGGTTAAAGAGAATCAG
GAGAAGATTAAGCTCAACAAGCAGCTTCCTTATTTGGTGGGAAACATTGT
TGAGATTTTGGAGATGAATCCTGAGGACGAGGCAGAGGAAGATGGTGCAA
ATATTGATCTTGACTCACAGAGGAAGGGTAAATGTGTAGTGTTGAAAACA
TCCACCCGTCAGACCATCTTTCTTCCAGTAGTTGGGCTTGTTGATCCTGA
TAAGTTGAAACCTGGTGATCTGGTTGGAGTGAATAAGGATAGTTACTTGA
TTTTGGACACACTGCCTTCTGAATATGATTCACGGGTGAAGGCAATGGAA
GTTGATGAGAAACCAACCGAAGATTATAATGACATTGGAGGGCTAGAGAA
GCAGATCCCAGAACTCATTGAAGCTATTGTGCTGCCAATGACACACAAAG
AGCGTTTCGGAAAGTTGGGGGTTCGTCCACCTAAAGGAGTGCTTTCTATA
TGGACCTCCCGGTACGGGGAAGACTTTGCTGGGTTCGTGCTTGGGCACCA
AAAGCCAAAAGCTACCTTTTTTGAGGCCCGCAGGGCCCCCAACTTTTCCA
AAATGTTTCTTTGGAAAGGGGAACCAAATGAACTTTTGTGAAGGCCTTTT
TTAACCTTTGAAAAGGGAAAAATCCCCCCCTGTGTTTTTTTTTCCTCACA
ATATAATTTGACCCCCTTTTTGTGAAAAAAACCGGGTTTGAAAACGGAAA
AAAAATGTGGGAAAAAAAAGGGGGGGGGGCACACAAAAAAATTTTATTTA
AAAATTTTTCCCACAAATTCTCCCCATAAA
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